RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 ZNF652Q9Y2D9 606 aa24.97■■□□□ 1.59
ABCF3-214ENST00000480562 DLG5Q8TDM6 1919 aa24.96■■□□□ 1.59
ABCF3-214ENST00000480562 CCDC88AQ3V6T2 1871 aa24.96■■□□□ 1.59
ABCF3-214ENST00000480562 THUMPD2Q9BTF0 503 aaKnown RBP24.96■■□□□ 1.59
ABCF3-214ENST00000480562 TNRC6CQ9HCJ0 1690 aaKnown RBP24.96■■□□□ 1.59
ABCF3-214ENST00000480562 SRGNP10124 158 aa24.95■■□□□ 1.58
ABCF3-214ENST00000480562 NFE2L2Q16236 605 aa24.95■■□□□ 1.58
ABCF3-214ENST00000480562 GLTPD2A6NH11 291 aa24.94■■□□□ 1.58
ABCF3-214ENST00000480562 STYK1Q6J9G0 422 aa24.94■■□□□ 1.58
ABCF3-214ENST00000480562 CNKSR1Q969H4 720 aa24.94■■□□□ 1.58
ABCF3-214ENST00000480562 NIP7Q9Y221 180 aaKnown RBP eCLIP24.94■■□□□ 1.58
ABCF3-214ENST00000480562 TIAM2Q8IVF5 1701 aa24.93■■□□□ 1.58
ABCF3-214ENST00000480562 FAM177BA6PVY3 158 aa24.93■■□□□ 1.58
ABCF3-214ENST00000480562 FSTL1Q12841 308 aa24.93■■□□□ 1.58
ABCF3-214ENST00000480562 HLFQ16534 295 aa24.93■■□□□ 1.58
ABCF3-214ENST00000480562 PNISRQ8TF01 805 aaKnown RBP24.93■■□□□ 1.58
ABCF3-214ENST00000480562 MASTLQ96GX5 879 aa24.93■■□□□ 1.58
ABCF3-214ENST00000480562 SLX4Q8IY92 1834 aa24.92■■□□□ 1.58
ABCF3-214ENST00000480562 PRPF40BQ6NWY9 871 aaKnown RBP24.92■■□□□ 1.58
ABCF3-214ENST00000480562 NGEFQ8N5V2 710 aa24.92■■□□□ 1.58
ABCF3-214ENST00000480562 DNAJC5GQ8N7S2 189 aa24.92■■□□□ 1.58
ABCF3-214ENST00000480562 MAPK8IP3Q9UPT6 1336 aa24.91■■□□□ 1.58
ABCF3-214ENST00000480562 EIF4A1P60842 406 aaKnown RBP24.91■■□□□ 1.58
ABCF3-214ENST00000480562 HTRA3P83110 453 aa24.91■■□□□ 1.58
ABCF3-214ENST00000480562 LAMB4A4D0S4 1761 aa24.9■■□□□ 1.58
ABCF3-214ENST00000480562 KDM3BQ7LBC6 1761 aa24.9■■□□□ 1.58
ABCF3-214ENST00000480562 CACNA1SQ13698 1873 aa24.9■■□□□ 1.58
ABCF3-214ENST00000480562 FER1L6Q2WGJ9 1857 aa24.9■■□□□ 1.58
ABCF3-214ENST00000480562 VEGFAP15692 232 aaPredicted RBP24.9■■□□□ 1.58
ABCF3-214ENST00000480562 TAOK3Q9H2K8 898 aa24.9■■□□□ 1.58
ABCF3-214ENST00000480562 ERFEQ4G0M1 354 aa24.89■■□□□ 1.58
ABCF3-214ENST00000480562 TPTE2Q6XPS3 522 aa24.89■■□□□ 1.58
ABCF3-214ENST00000480562 PNNQ9H307 717 aaKnown RBP24.89■■□□□ 1.58
ABCF3-214ENST00000480562 RGL2O15211 777 aa24.88■■□□□ 1.57
ABCF3-214ENST00000480562 SMC1BQ8NDV3 1235 aa24.88■■□□□ 1.57
ABCF3-214ENST00000480562 RRP7AQ9Y3A4 280 aaKnown RBP24.88■■□□□ 1.57
ABCF3-214ENST00000480562 WDR90Q96KV7 1748 aa24.88■■□□□ 1.57
ABCF3-214ENST00000480562 LTBP3Q9NS15 1303 aa24.86■■□□□ 1.57
ABCF3-214ENST00000480562 NPR1P16066 1061 aa24.86■■□□□ 1.57
ABCF3-214ENST00000480562 ARFGEF2Q9Y6D5 1785 aa24.85■■□□□ 1.57
ABCF3-214ENST00000480562 KLRG2A4D1S0 409 aaPredicted RBP24.85■■□□□ 1.57
ABCF3-214ENST00000480562 POTECB2RU33 542 aa24.85■■□□□ 1.57
ABCF3-214ENST00000480562 MYL6BP14649 208 aa24.85■■□□□ 1.57
ABCF3-214ENST00000480562 RALBP1Q15311 655 aa24.85■■□□□ 1.57
ABCF3-214ENST00000480562 SOGA3Q5TF21 947 aa24.85■■□□□ 1.57
ABCF3-214ENST00000480562 DPY19L2Q6NUT2 758 aa24.85■■□□□ 1.57
ABCF3-214ENST00000480562 TTLL7Q6ZT98 887 aa24.85■■□□□ 1.57
ABCF3-214ENST00000480562 C7orf43Q8WVR3 580 aa24.85■■□□□ 1.57
ABCF3-214ENST00000480562 GTF2E1P29083 439 aaPredicted RBP24.84■■□□□ 1.57
ABCF3-214ENST00000480562 DICER1Q9UPY3 1922 aaKnown RBP24.84■■□□□ 1.57
ABCF3-214ENST00000480562 MAP3K15Q6ZN16 1313 aa24.83■■□□□ 1.56
ABCF3-214ENST00000480562 ERVV-1B6SEH8 477 aa24.82■■□□□ 1.56
ABCF3-214ENST00000480562 RIPK4P57078 832 aa24.82■■□□□ 1.56
ABCF3-214ENST00000480562 DDX10Q13206 875 aaKnown RBP24.82■■□□□ 1.56
ABCF3-214ENST00000480562 CCDC93Q567U6 631 aa24.82■■□□□ 1.56
ABCF3-214ENST00000480562 OLFM4Q6UX06 510 aa24.82■■□□□ 1.56
ABCF3-214ENST00000480562 KIF6Q6ZMV9 814 aa24.82■■□□□ 1.56
ABCF3-214ENST00000480562 TSPYL4Q9UJ04 414 aa24.82■■□□□ 1.56
ABCF3-214ENST00000480562 NUTM1Q86Y26 1132 aa24.81■■□□□ 1.56
ABCF3-214ENST00000480562 ZBTB3Q9H5J0 574 aa24.81■■□□□ 1.56
ABCF3-214ENST00000480562 GPTP24298 496 aa24.8■■□□□ 1.56
ABCF3-214ENST00000480562 KLRG1Q96E93 195 aa24.8■■□□□ 1.56
ABCF3-214ENST00000480562 ABCC12Q96J65 1359 aa24.8■■□□□ 1.56
ABCF3-214ENST00000480562 NUP98P52948 1817 aa24.79■■□□□ 1.56
ABCF3-214ENST00000480562 DDNO94850 711 aaPredicted RBP24.79■■□□□ 1.56
ABCF3-214ENST00000480562 IFFO2Q5TF58 517 aa24.79■■□□□ 1.56
ABCF3-214ENST00000480562 TMPOP42166 694 aaKnown RBP24.78■■□□□ 1.56
ABCF3-214ENST00000480562 NYXQ9GZU5 481 aa24.78■■□□□ 1.56
ABCF3-214ENST00000480562 EIF2S2P20042 333 aaKnown RBP24.77■■□□□ 1.56
ABCF3-214ENST00000480562 CCDC146Q8IYE0 955 aa24.77■■□□□ 1.56
ABCF3-214ENST00000480562 ZNF277Q9NRM2 450 aaPredicted RBP24.77■■□□□ 1.56
ABCF3-214ENST00000480562 UBN2Q6ZU65 1347 aa24.77■■□□□ 1.56
ABCF3-214ENST00000480562 ALDH1B1P30837 517 aa24.76■■□□□ 1.55
ABCF3-214ENST00000480562 FKBP4Q02790 459 aaKnown RBP eCLIP24.76■■□□□ 1.55
ABCF3-214ENST00000480562 SUSD4Q5VX71 490 aa24.75■■□□□ 1.55
ABCF3-214ENST00000480562 ERBB4Q15303 1308 aa24.75■■□□□ 1.55
ABCF3-214ENST00000480562 MYBBP1AQ9BQG0 1328 aaKnown RBP24.75■■□□□ 1.55
ABCF3-214ENST00000480562 ANXA1P04083 346 aa24.74■■□□□ 1.55
ABCF3-214ENST00000480562 NEUROD2Q15784 382 aa24.74■■□□□ 1.55
ABCF3-214ENST00000480562 CRY2Q49AN0 593 aa24.74■■□□□ 1.55
ABCF3-214ENST00000480562 ZNF34Q8IZ26 560 aa24.74■■□□□ 1.55
ABCF3-214ENST00000480562 RTKN2Q8IZC4 609 aa24.74■■□□□ 1.55
ABCF3-214ENST00000480562 LMOD3Q0VAK6 560 aa24.73■■□□□ 1.55
ABCF3-214ENST00000480562 PDIA6Q15084 440 aa24.73■■□□□ 1.55
ABCF3-214ENST00000480562 PROSER3Q2NL68 480 aa24.73■■□□□ 1.55
ABCF3-214ENST00000480562 POTEIP0CG38 1075 aa24.72■■□□□ 1.55
ABCF3-214ENST00000480562 POTEJP0CG39 1038 aa24.72■■□□□ 1.55
ABCF3-214ENST00000480562 GIGYF2Q6Y7W6 1299 aaKnown RBP24.72■■□□□ 1.55
ABCF3-214ENST00000480562 LRP10Q7Z4F1 713 aa24.72■■□□□ 1.55
ABCF3-214ENST00000480562 SYNE4Q8N205 404 aa24.72■■□□□ 1.55
ABCF3-214ENST00000480562 NECTIN2Q92692 538 aa24.72■■□□□ 1.55
ABCF3-214ENST00000480562 IBTKQ9P2D0 1353 aaPredicted RBP24.71■■□□□ 1.55
ABCF3-214ENST00000480562 JMYQ8N9B5 988 aa24.71■■□□□ 1.55
ABCF3-214ENST00000480562 RPGRQ92834 1020 aaKnown RBP24.71■■□□□ 1.55
ABCF3-214ENST00000480562 BABAM1Q9NWV8 329 aa24.71■■□□□ 1.55
ABCF3-214ENST00000480562 ZNF541Q9H0D2 1346 aa24.7■■□□□ 1.54
ABCF3-214ENST00000480562 NTSR2O95665 410 aa24.7■■□□□ 1.54
ABCF3-214ENST00000480562 IARSP41252 1262 aaKnown RBP24.69■■□□□ 1.54
ABCF3-214ENST00000480562 CHADLQ6NUI6 762 aa24.69■■□□□ 1.54
ABCF3-214ENST00000480562 C3orf67Q6ZVT6 689 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms