RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 SAMD5Q5TGI4 173 aa8.11□□□□□ -1.11
CMSS1-204ENST00000479555 Q8N3U1 123 aa8.11□□□□□ -1.11
CMSS1-204ENST00000479555 AVENQ9NQS1 362 aaPredicted RBP8.11□□□□□ -1.11
CMSS1-204ENST00000479555 TEAD4Q15561 434 aa8.1□□□□□ -1.11
CMSS1-204ENST00000479555 C8orf86Q6ZUL3 223 aa8.1□□□□□ -1.11
CMSS1-204ENST00000479555 TPCN2Q8NHX9 752 aa8.1□□□□□ -1.11
CMSS1-204ENST00000479555 C7orf43Q8WVR3 580 aa8.1□□□□□ -1.11
CMSS1-204ENST00000479555 HSH2DQ96JZ2 352 aa8.1□□□□□ -1.11
CMSS1-204ENST00000479555 EML1O00423 815 aa8.09□□□□□ -1.11
CMSS1-204ENST00000479555 PIK3R2O00459 728 aa8.09□□□□□ -1.11
CMSS1-204ENST00000479555 ELOA3CA0A087WX78 387 aaPredicted RBP8.08□□□□□ -1.12
CMSS1-204ENST00000479555 ELOA3DA6NLF2 546 aaPredicted RBP8.08□□□□□ -1.12
CMSS1-204ENST00000479555 CLDN10P78369 228 aa8.08□□□□□ -1.12
CMSS1-204ENST00000479555 ELOA3BQ3SY89 546 aa8.08□□□□□ -1.12
CMSS1-204ENST00000479555 ELOA3Q8NG57 546 aa8.08□□□□□ -1.12
CMSS1-204ENST00000479555 MDFIQ99750 246 aa8.08□□□□□ -1.12
CMSS1-204ENST00000479555 TSPAN10Q9H1Z9 355 aaPredicted RBP8.08□□□□□ -1.12
CMSS1-204ENST00000479555 SEMA6BQ9H3T3 888 aa8.08□□□□□ -1.12
CMSS1-204ENST00000479555 ZBTB7BO15156 539 aaPredicted RBP8.07□□□□□ -1.12
CMSS1-204ENST00000479555 NFATC2IPQ8NCF5 419 aa8.07□□□□□ -1.12
CMSS1-204ENST00000479555 RHPN1Q8TCX5 695 aa8.07□□□□□ -1.12
CMSS1-204ENST00000479555 UCN2Q96RP3 112 aa8.07□□□□□ -1.12
CMSS1-204ENST00000479555 STARD13Q9Y3M8 1113 aa8.07□□□□□ -1.12
CMSS1-204ENST00000479555 HCN4Q9Y3Q4 1203 aa8.07□□□□□ -1.12
CMSS1-204ENST00000479555 SERTM1A2A2V5 107 aa8.06□□□□□ -1.12
CMSS1-204ENST00000479555 USP17L3A6NCW0 530 aa8.06□□□□□ -1.12
CMSS1-204ENST00000479555 USP17L4A6NCW7 530 aa8.06□□□□□ -1.12
CMSS1-204ENST00000479555 LAMC2Q13753 1193 aa8.06□□□□□ -1.12
CMSS1-204ENST00000479555 USP17L2Q6R6M4 530 aa8.06□□□□□ -1.12
CMSS1-204ENST00000479555 USP17L1Q7RTZ2 530 aa8.06□□□□□ -1.12
CMSS1-204ENST00000479555 ZNF280CQ8ND82 737 aa8.06□□□□□ -1.12
CMSS1-204ENST00000479555 NEUROD4Q9HD90 331 aa8.06□□□□□ -1.12
CMSS1-204ENST00000479555 M0R082 166 aa8.05□□□□□ -1.12
CMSS1-204ENST00000479555 ALBP02768 609 aa8.05□□□□□ -1.12
CMSS1-204ENST00000479555 COL9A3Q14050 684 aaPredicted RBP8.05□□□□□ -1.12
CMSS1-204ENST00000479555 CCDC102BQ68D86 513 aa8.05□□□□□ -1.12
CMSS1-204ENST00000479555 ZNF417Q8TAU3 575 aa8.05□□□□□ -1.12
CMSS1-204ENST00000479555 PSMG3-AS1Q96PY0 264 aa8.05□□□□□ -1.12
CMSS1-204ENST00000479555 ZNF587Q96SQ5 575 aaPredicted RBP8.05□□□□□ -1.12
CMSS1-204ENST00000479555 SIN3BO75182 1162 aa8.04□□□□□ -1.12
CMSS1-204ENST00000479555 SPATA31C1P0DKV0 1188 aa8.04□□□□□ -1.12
CMSS1-204ENST00000479555 GATA4P43694 442 aa8.04□□□□□ -1.12
CMSS1-204ENST00000479555 SPEM2Q0P670 501 aa8.04□□□□□ -1.12
CMSS1-204ENST00000479555 TSEN2Q8NCE0 465 aaKnown RBP8.04□□□□□ -1.12
CMSS1-204ENST00000479555 SFI1A8K8P3 1242 aa8.03□□□□□ -1.12
CMSS1-204ENST00000479555 ALAS2P22557 587 aa8.03□□□□□ -1.12
CMSS1-204ENST00000479555 ZNF594Q96JF6 807 aaPredicted RBP8.03□□□□□ -1.12
CMSS1-204ENST00000479555 CEP63Q96MT8 703 aa8.03□□□□□ -1.12
CMSS1-204ENST00000479555 PHACTR1Q9C0D0 580 aa8.03□□□□□ -1.12
CMSS1-204ENST00000479555 LZTS3O60299 673 aaPredicted RBP8.02□□□□□ -1.13
CMSS1-204ENST00000479555 LGR5O75473 907 aa8.02□□□□□ -1.13
CMSS1-204ENST00000479555 ADH7P40394 386 aa8.02□□□□□ -1.13
CMSS1-204ENST00000479555 HDGFL1Q5TGJ6 251 aa8.02□□□□□ -1.13
CMSS1-204ENST00000479555 TRIM50Q86XT4 487 aa8.02□□□□□ -1.13
CMSS1-204ENST00000479555 KRTAP1-3Q8IUG1 177 aa8.02□□□□□ -1.13
CMSS1-204ENST00000479555 OGFOD1Q8N543 542 aa8.02□□□□□ -1.13
CMSS1-204ENST00000479555 GAS2L2Q8NHY3 880 aa8.02□□□□□ -1.13
CMSS1-204ENST00000479555 BRD7Q9NPI1 651 aa8.02□□□□□ -1.13
CMSS1-204ENST00000479555 ADARB2-AS1A8MUL3 147 aa8.01□□□□□ -1.13
CMSS1-204ENST00000479555 PSMA6P60900 246 aaKnown RBP8.01□□□□□ -1.13
CMSS1-204ENST00000479555 TYRO3Q06418 890 aa8.01□□□□□ -1.13
CMSS1-204ENST00000479555 TBC1D8BQ0IIM8 1120 aa8.01□□□□□ -1.13
CMSS1-204ENST00000479555 GRIK4Q16099 956 aa8.01□□□□□ -1.13
CMSS1-204ENST00000479555 MICALL1Q8N3F8 863 aa8.01□□□□□ -1.13
CMSS1-204ENST00000479555 C21orf2O43822 256 aa8□□□□□ -1.13
CMSS1-204ENST00000479555 RAD21O60216 631 aa8□□□□□ -1.13
CMSS1-204ENST00000479555 RSPO4Q2I0M5 234 aaPredicted RBP8□□□□□ -1.13
CMSS1-204ENST00000479555 PLEKHM2Q8IWE5 1019 aa8□□□□□ -1.13
CMSS1-204ENST00000479555 WWC1Q8IX03 1113 aa8□□□□□ -1.13
CMSS1-204ENST00000479555 TNFRSF25Q93038 417 aa8□□□□□ -1.13
CMSS1-204ENST00000479555 SUSD3Q96L08 255 aa8□□□□□ -1.13
CMSS1-204ENST00000479555 TPSG1Q9NRR2 321 aa8□□□□□ -1.13
CMSS1-204ENST00000479555 MKRN1Q9UHC7 482 aaKnown RBP8□□□□□ -1.13
CMSS1-204ENST00000479555 PPP1R12BO60237 982 aaPredicted RBP7.99□□□□□ -1.13
CMSS1-204ENST00000479555 NID1P14543 1247 aa7.99□□□□□ -1.13
CMSS1-204ENST00000479555 UBTFP17480 764 aaKnown RBP7.99□□□□□ -1.13
CMSS1-204ENST00000479555 FOXD4L6Q3SYB3 417 aaPredicted RBP7.99□□□□□ -1.13
CMSS1-204ENST00000479555 PRRT3Q5FWE3 981 aa7.99□□□□□ -1.13
CMSS1-204ENST00000479555 FOXD4L3Q6VB84 417 aaPredicted RBP7.99□□□□□ -1.13
CMSS1-204ENST00000479555 BHMTQ93088 406 aa7.99□□□□□ -1.13
CMSS1-204ENST00000479555 NGLY1Q96IV0 654 aa7.99□□□□□ -1.13
CMSS1-204ENST00000479555 IGFLR1Q9H665 355 aa7.99□□□□□ -1.13
CMSS1-204ENST00000479555 ATP9BO43861 1147 aa7.98□□□□□ -1.13
CMSS1-204ENST00000479555 DKK1O94907 266 aa7.98□□□□□ -1.13
CMSS1-204ENST00000479555 ATP1A2P50993 1020 aa7.98□□□□□ -1.13
CMSS1-204ENST00000479555 ZMYM1Q5SVZ6 1142 aa7.98□□□□□ -1.13
CMSS1-204ENST00000479555 KCNH4Q9UQ05 1017 aa7.98□□□□□ -1.13
CMSS1-204ENST00000479555 APBA3O96018 575 aa7.97□□□□□ -1.13
CMSS1-204ENST00000479555 C1orf53Q5VUE5 145 aa7.97□□□□□ -1.13
CMSS1-204ENST00000479555 POTEAQ6S8J7 498 aa7.97□□□□□ -1.13
CMSS1-204ENST00000479555 C20orf204Q6ZNR8 217 aa7.97□□□□□ -1.13
CMSS1-204ENST00000479555 CHMP7Q8WUX9 453 aaPredicted RBP7.97□□□□□ -1.13
CMSS1-204ENST00000479555 GPC6Q9Y625 555 aaPredicted RBP7.97□□□□□ -1.13
CMSS1-204ENST00000479555 HIRAP54198 1017 aaPredicted RBP7.96□□□□□ -1.14
CMSS1-204ENST00000479555 NKAPLQ5M9Q1 402 aa7.96□□□□□ -1.14
CMSS1-204ENST00000479555 ALDH16A1Q8IZ83 802 aa7.96□□□□□ -1.14
CMSS1-204ENST00000479555 PALM3A6NDB9 673 aaPredicted RBP7.95□□□□□ -1.14
CMSS1-204ENST00000479555 SPDYE3A6NKU9 549 aa7.95□□□□□ -1.14
CMSS1-204ENST00000479555 TRIM28Q13263 835 aaKnown RBP7.95□□□□□ -1.14
CMSS1-204ENST00000479555 SIX5Q8N196 739 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms