RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 ERFEQ4G0M1 354 aa16.09■□□□□ 0.17
GCA-208ENST00000479199 NPM2Q86SE8 214 aaKnown RBP16.09■□□□□ 0.17
GCA-208ENST00000479199 CFAP53Q96M91 514 aa16.09■□□□□ 0.17
GCA-208ENST00000479199 SETDB2Q96T68 719 aa16.09■□□□□ 0.17
GCA-208ENST00000479199 PDZRN3Q9UPQ7 1066 aa16.09■□□□□ 0.17
GCA-208ENST00000479199 PCNTO95613 3336 aa16.09■□□□□ 0.17
GCA-208ENST00000479199 ST5P78524 1137 aa16.08■□□□□ 0.16
GCA-208ENST00000479199 COL13A1Q5TAT6 717 aaPredicted RBP16.08■□□□□ 0.16
GCA-208ENST00000479199 PRPF40BQ6NWY9 871 aaKnown RBP16.08■□□□□ 0.16
GCA-208ENST00000479199 MCM10Q7L590 875 aa16.08■□□□□ 0.16
GCA-208ENST00000479199 TAOK3Q9H2K8 898 aa16.08■□□□□ 0.16
GCA-208ENST00000479199 USP16Q9Y5T5 823 aa16.08■□□□□ 0.16
GCA-208ENST00000479199 LTBP3Q9NS15 1303 aa16.08■□□□□ 0.16
GCA-208ENST00000479199 SRGNP10124 158 aa16.07■□□□□ 0.16
GCA-208ENST00000479199 STYK1Q6J9G0 422 aa16.07■□□□□ 0.16
GCA-208ENST00000479199 U2AF1L5P0DN76 240 aaPredicted RBP16.06■□□□□ 0.16
GCA-208ENST00000479199 U2AF1Q01081 240 aaKnown RBP eCLIP16.06■□□□□ 0.16
GCA-208ENST00000479199 CNKSR1Q969H4 720 aa16.06■□□□□ 0.16
GCA-208ENST00000479199 PPP2R1AP30153 589 aa16.05■□□□□ 0.16
GCA-208ENST00000479199 DCTN1Q14203 1278 aa16.05■□□□□ 0.16
GCA-208ENST00000479199 DPY19L2Q6NUT2 758 aa16.05■□□□□ 0.16
GCA-208ENST00000479199 NBPF5PQ86XG9 351 aaPredicted RBP16.05■□□□□ 0.16
GCA-208ENST00000479199 MASTLQ96GX5 879 aa16.05■□□□□ 0.16
GCA-208ENST00000479199 NBPF26B4DH59 902 aa16.04■□□□□ 0.16
GCA-208ENST00000479199 SNRPA1P09661 255 aaKnown RBP16.04■□□□□ 0.16
GCA-208ENST00000479199 NBPF10Q6P3W6 841 aaKnown RBP16.04■□□□□ 0.16
GCA-208ENST00000479199 NBPF15Q8N660 670 aa16.04■□□□□ 0.16
GCA-208ENST00000479199 RTF1Q92541 710 aaKnown RBP16.04■□□□□ 0.16
GCA-208ENST00000479199 NUDCQ9Y266 331 aa16.04■□□□□ 0.16
GCA-208ENST00000479199 DDNO94850 711 aaPredicted RBP16.03■□□□□ 0.16
GCA-208ENST00000479199 POTEIP0CG38 1075 aa16.03■□□□□ 0.16
GCA-208ENST00000479199 POTEJP0CG39 1038 aa16.03■□□□□ 0.16
GCA-208ENST00000479199 ZNF652Q9Y2D9 606 aa16.03■□□□□ 0.16
GCA-208ENST00000479199 ADAMTSL1Q8N6G6 1762 aa16.03■□□□□ 0.16
GCA-208ENST00000479199 HSPA1AP0DMV8 641 aaKnown RBP16.02■□□□□ 0.16
GCA-208ENST00000479199 HSPA1BP0DMV9 641 aaKnown RBP16.02■□□□□ 0.16
GCA-208ENST00000479199 SOGA3Q5TF21 947 aa16.02■□□□□ 0.16
GCA-208ENST00000479199 CLEC4GQ6UXB4 293 aa16.02■□□□□ 0.16
GCA-208ENST00000479199 FAM177BA6PVY3 158 aa16.01■□□□□ 0.15
GCA-208ENST00000479199 CCDC93Q567U6 631 aa16.01■□□□□ 0.15
GCA-208ENST00000479199 OLFM4Q6UX06 510 aa16.01■□□□□ 0.15
GCA-208ENST00000479199 NIP7Q9Y221 180 aaKnown RBP eCLIP16.01■□□□□ 0.15
GCA-208ENST00000479199 ZNF541Q9H0D2 1346 aa16■□□□□ 0.15
GCA-208ENST00000479199 CAPN15O75808 1086 aa16■□□□□ 0.15
GCA-208ENST00000479199 NPR1P16066 1061 aa16■□□□□ 0.15
GCA-208ENST00000479199 CHADLQ6NUI6 762 aa16■□□□□ 0.15
GCA-208ENST00000479199 C7orf43Q8WVR3 580 aa16■□□□□ 0.15
GCA-208ENST00000479199 ABCC12Q96J65 1359 aa16■□□□□ 0.15
GCA-208ENST00000479199 TNS4Q8IZW8 715 aa15.99■□□□□ 0.15
GCA-208ENST00000479199 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
GCA-208ENST00000479199 HLFQ16534 295 aa15.98■□□□□ 0.15
GCA-208ENST00000479199 SNED1Q8TER0 1413 aa15.98■□□□□ 0.15
GCA-208ENST00000479199 ZNF277Q9NRM2 450 aaPredicted RBP15.98■□□□□ 0.15
GCA-208ENST00000479199 COL4A5P29400 1685 aa15.98■□□□□ 0.15
GCA-208ENST00000479199 LAMB2P55268 1798 aa15.98■□□□□ 0.15
GCA-208ENST00000479199 ANKRD36CQ5JPF3 1778 aa15.98■□□□□ 0.15
GCA-208ENST00000479199 KLRG2A4D1S0 409 aaPredicted RBP15.97■□□□□ 0.15
GCA-208ENST00000479199 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
GCA-208ENST00000479199 FKBP4Q02790 459 aaKnown RBP eCLIP15.97■□□□□ 0.15
GCA-208ENST00000479199 TPTE2Q6XPS3 522 aa15.97■□□□□ 0.15
GCA-208ENST00000479199 L3MBTL3Q96JM7 780 aaPredicted RBP15.97■□□□□ 0.15
GCA-208ENST00000479199 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
GCA-208ENST00000479199 MKRN1Q9UHC7 482 aaKnown RBP15.97■□□□□ 0.15
GCA-208ENST00000479199 LTBP1Q14766 1721 aa15.97■□□□□ 0.15
GCA-208ENST00000479199 IQCA1LA6NCM1 817 aa15.96■□□□□ 0.15
GCA-208ENST00000479199 RGL2O15211 777 aa15.96■□□□□ 0.15
GCA-208ENST00000479199 TAF7Q15545 349 aaPredicted RBP15.96■□□□□ 0.15
GCA-208ENST00000479199 TAF1DQ9H5J8 278 aaPredicted RBP15.96■□□□□ 0.15
GCA-208ENST00000479199 PASKQ96RG2 1323 aa15.95■□□□□ 0.14
GCA-208ENST00000479199 LDHDQ86WU2 507 aa15.95■□□□□ 0.14
GCA-208ENST00000479199 NGEFQ8N5V2 710 aa15.95■□□□□ 0.14
GCA-208ENST00000479199 NUTM1Q86Y26 1132 aa15.94■□□□□ 0.14
GCA-208ENST00000479199 THUMPD2Q9BTF0 503 aaKnown RBP15.94■□□□□ 0.14
GCA-208ENST00000479199 CNTNAP1P78357 1384 aa15.94■□□□□ 0.14
GCA-208ENST00000479199 TRPM7Q96QT4 1865 aa15.94■□□□□ 0.14
GCA-208ENST00000479199 GTF2E1P29083 439 aaPredicted RBP15.93■□□□□ 0.14
GCA-208ENST00000479199 IARSP41252 1262 aaKnown RBP15.93■□□□□ 0.14
GCA-208ENST00000479199 EAPPQ56P03 285 aaPredicted RBP15.93■□□□□ 0.14
GCA-208ENST00000479199 SLC51AQ86UW1 340 aa15.93■□□□□ 0.14
GCA-208ENST00000479199 RTKN2Q8IZC4 609 aa15.93■□□□□ 0.14
GCA-208ENST00000479199 RNF123Q5XPI4 1314 aa15.93■□□□□ 0.14
GCA-208ENST00000479199 MAP3K15Q6ZN16 1313 aa15.93■□□□□ 0.14
GCA-208ENST00000479199 TTLL7Q6ZT98 887 aa15.92■□□□□ 0.14
GCA-208ENST00000479199 RIC1Q4ADV7 1423 aa15.92■□□□□ 0.14
GCA-208ENST00000479199 UBN2Q6ZU65 1347 aa15.92■□□□□ 0.14
GCA-208ENST00000479199 TAF1P21675 1872 aa15.91■□□□□ 0.14
GCA-208ENST00000479199 IBTKQ9P2D0 1353 aaPredicted RBP15.91■□□□□ 0.14
GCA-208ENST00000479199 MYL6BP14649 208 aa15.91■□□□□ 0.14
GCA-208ENST00000479199 GPTP24298 496 aa15.91■□□□□ 0.14
GCA-208ENST00000479199 CRY2Q49AN0 593 aa15.91■□□□□ 0.14
GCA-208ENST00000479199 KIF6Q6ZMV9 814 aa15.91■□□□□ 0.14
GCA-208ENST00000479199 SYNE4Q8N205 404 aa15.91■□□□□ 0.14
GCA-208ENST00000479199 ZBTB3Q9H5J0 574 aa15.91■□□□□ 0.14
GCA-208ENST00000479199 HACL1Q9UJ83 578 aa15.91■□□□□ 0.14
GCA-208ENST00000479199 RRP7AQ9Y3A4 280 aaKnown RBP15.91■□□□□ 0.14
GCA-208ENST00000479199 NEFMP07197 916 aa15.9■□□□□ 0.14
GCA-208ENST00000479199 ALDH1B1P30837 517 aa15.9■□□□□ 0.14
GCA-208ENST00000479199 EPHX2P34913 555 aa15.9■□□□□ 0.14
GCA-208ENST00000479199 EIF4A1P60842 406 aaKnown RBP15.9■□□□□ 0.14
GCA-208ENST00000479199 PNISRQ8TF01 805 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms