RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 MAP3K15Q6ZN16 1313 aa26.44■■□□□ 1.82
VARS-224ENST00000479051 TBC1D9BQ66K14 1250 aa26.44■■□□□ 1.82
VARS-224ENST00000479051 ZNF521Q96K83 1311 aa26.43■■□□□ 1.82
VARS-224ENST00000479051 ANXA1P04083 346 aa26.43■■□□□ 1.82
VARS-224ENST00000479051 PROSER3Q2NL68 480 aa26.43■■□□□ 1.82
VARS-224ENST00000479051 CCDC30Q5VVM6 783 aa26.43■■□□□ 1.82
VARS-224ENST00000479051 CARMIL3Q8ND23 1372 aa26.43■■□□□ 1.82
VARS-224ENST00000479051 C10orf71Q711Q0 1435 aa26.42■■□□□ 1.82
VARS-224ENST00000479051 SERPINB2P05120 415 aa26.42■■□□□ 1.82
VARS-224ENST00000479051 TWISTNBQ3B726 338 aaPredicted RBP26.42■■□□□ 1.82
VARS-224ENST00000479051 TTLL7Q6ZT98 887 aa26.42■■□□□ 1.82
VARS-224ENST00000479051 HYPKQ9NX55 129 aa26.42■■□□□ 1.82
VARS-224ENST00000479051 LRP10Q7Z4F1 713 aa26.41■■□□□ 1.82
VARS-224ENST00000479051 NPHP1O15259 732 aa26.4■■□□□ 1.82
VARS-224ENST00000479051 COPS6Q7L5N1 327 aa26.4■■□□□ 1.82
VARS-224ENST00000479051 TSPYL6Q8N831 410 aa26.4■■□□□ 1.82
VARS-224ENST00000479051 NLGN2Q8NFZ4 835 aa26.4■■□□□ 1.82
VARS-224ENST00000479051 XAGE3Q8WTP9 111 aa26.4■■□□□ 1.82
VARS-224ENST00000479051 ZBTB3Q9H5J0 574 aa26.4■■□□□ 1.82
VARS-224ENST00000479051 AIMP1Q12904 312 aaKnown RBP26.39■■□□□ 1.82
VARS-224ENST00000479051 STK31Q9BXU1 1019 aa26.39■■□□□ 1.82
VARS-224ENST00000479051 NIP7Q9Y221 180 aaKnown RBP eCLIP26.39■■□□□ 1.82
VARS-224ENST00000479051 E9PSI1 815 aa26.38■■□□□ 1.81
VARS-224ENST00000479051 TGFB2P61812 414 aa26.38■■□□□ 1.81
VARS-224ENST00000479051 HLFQ16534 295 aa26.38■■□□□ 1.81
VARS-224ENST00000479051 SPINK5Q9NQ38 1064 aaPredicted RBP26.38■■□□□ 1.81
VARS-224ENST00000479051 EXOSC9Q06265 439 aaKnown RBP26.37■■□□□ 1.81
VARS-224ENST00000479051 KIF13BQ9NQT8 1826 aa26.37■■□□□ 1.81
VARS-224ENST00000479051 GIGYF2Q6Y7W6 1299 aaKnown RBP26.36■■□□□ 1.81
VARS-224ENST00000479051 AFDNP55196 1824 aaKnown RBP26.35■■□□□ 1.81
VARS-224ENST00000479051 HSP90AB3PQ58FF7 597 aa26.35■■□□□ 1.81
VARS-224ENST00000479051 NBPF5PQ86XG9 351 aaPredicted RBP26.35■■□□□ 1.81
VARS-224ENST00000479051 CNBD1Q8NA66 436 aa26.35■■□□□ 1.81
VARS-224ENST00000479051 ATP10DQ9P241 1426 aa26.35■■□□□ 1.81
VARS-224ENST00000479051 NRXN2Q9P2S2 1712 aa26.35■■□□□ 1.81
VARS-224ENST00000479051 NUP98P52948 1817 aa26.34■■□□□ 1.81
VARS-224ENST00000479051 ST5P78524 1137 aa26.33■■□□□ 1.81
VARS-224ENST00000479051 GPR162Q16538 588 aa26.32■■□□□ 1.8
VARS-224ENST00000479051 TPTE2Q6XPS3 522 aa26.32■■□□□ 1.8
VARS-224ENST00000479051 ANKRD13DQ6ZTN6 518 aa26.32■■□□□ 1.8
VARS-224ENST00000479051 PELP1Q8IZL8 1130 aaKnown RBP26.32■■□□□ 1.8
VARS-224ENST00000479051 PLBD2Q8NHP8 589 aa26.32■■□□□ 1.8
VARS-224ENST00000479051 PXDNLA1KZ92 1463 aa26.31■■□□□ 1.8
VARS-224ENST00000479051 DDX58O95786 925 aaKnown RBP26.31■■□□□ 1.8
VARS-224ENST00000479051 SLFN5Q08AF3 891 aa26.31■■□□□ 1.8
VARS-224ENST00000479051 PRR5LQ6MZQ0 368 aa26.31■■□□□ 1.8
VARS-224ENST00000479051 NYXQ9GZU5 481 aa26.31■■□□□ 1.8
VARS-224ENST00000479051 VAMP4O75379 141 aa26.3■■□□□ 1.8
VARS-224ENST00000479051 GPTP24298 496 aa26.3■■□□□ 1.8
VARS-224ENST00000479051 GTF2E1P29083 439 aaPredicted RBP26.3■■□□□ 1.8
VARS-224ENST00000479051 HNRNPUQ00839 825 aaKnown RBP eCLIP26.3■■□□□ 1.8
VARS-224ENST00000479051 PARP10Q53GL7 1025 aa26.29■■□□□ 1.8
VARS-224ENST00000479051 ZNF34Q8IZ26 560 aa26.29■■□□□ 1.8
VARS-224ENST00000479051 BRIP1Q9BX63 1249 aa26.29■■□□□ 1.8
VARS-224ENST00000479051 PDZRN3Q9UPQ7 1066 aa26.29■■□□□ 1.8
VARS-224ENST00000479051 A0A0G2JLW4 131 aa26.28■■□□□ 1.8
VARS-224ENST00000479051 FAM177BA6PVY3 158 aa26.28■■□□□ 1.8
VARS-224ENST00000479051 DPEP1P16444 411 aa26.28■■□□□ 1.8
VARS-224ENST00000479051 PDE6BP35913 854 aa26.28■■□□□ 1.8
VARS-224ENST00000479051 RIC3Q7Z5B4 369 aa26.28■■□□□ 1.8
VARS-224ENST00000479051 PHAXQ9H814 394 aaKnown RBP26.28■■□□□ 1.8
VARS-224ENST00000479051 TCERG1O14776 1098 aaKnown RBP26.27■■□□□ 1.8
VARS-224ENST00000479051 SLC4A2P04920 1241 aa26.27■■□□□ 1.8
VARS-224ENST00000479051 TCIRG1Q13488 830 aa26.27■■□□□ 1.8
VARS-224ENST00000479051 PPP1R42Q7Z4L9 355 aa26.27■■□□□ 1.8
VARS-224ENST00000479051 IBTKQ9P2D0 1353 aaPredicted RBP26.27■■□□□ 1.8
VARS-224ENST00000479051 N4BP2Q86UW6 1770 aaPredicted RBP26.25■■□□□ 1.79
VARS-224ENST00000479051 UBN2Q6ZU65 1347 aa26.25■■□□□ 1.79
VARS-224ENST00000479051 H0YIN7 160 aa26.25■■□□□ 1.79
VARS-224ENST00000479051 CDCA7LQ96GN5 454 aa26.25■■□□□ 1.79
VARS-224ENST00000479051 KIAA1551Q9HCM1 1747 aa26.25■■□□□ 1.79
VARS-224ENST00000479051 GRIN3BO60391 1043 aa26.24■■□□□ 1.79
VARS-224ENST00000479051 C2CD5Q86YS7 1000 aa26.24■■□□□ 1.79
VARS-224ENST00000479051 CCDC24Q8N4L8 307 aa26.24■■□□□ 1.79
VARS-224ENST00000479051 PIM2Q9P1W9 311 aa26.24■■□□□ 1.79
VARS-224ENST00000479051 ANKRD36CQ5JPF3 1778 aa26.23■■□□□ 1.79
VARS-224ENST00000479051 CHRNA5P30532 468 aa26.23■■□□□ 1.79
VARS-224ENST00000479051 UTP14AQ9BVJ6 771 aaKnown RBP26.23■■□□□ 1.79
VARS-224ENST00000479051 CACNA1FO60840 1977 aa26.22■■□□□ 1.79
VARS-224ENST00000479051 RNF123Q5XPI4 1314 aa26.22■■□□□ 1.79
VARS-224ENST00000479051 SUSD4Q5VX71 490 aa26.22■■□□□ 1.79
VARS-224ENST00000479051 WWC3Q9ULE0 1092 aa26.22■■□□□ 1.79
VARS-224ENST00000479051 TRMT2AQ8IZ69 625 aaKnown RBP26.21■■□□□ 1.79
VARS-224ENST00000479051 BCS1LQ9Y276 419 aa26.21■■□□□ 1.79
VARS-224ENST00000479051 ARFGEF2Q9Y6D5 1785 aa26.2■■□□□ 1.79
VARS-224ENST00000479051 KCNA3P22001 575 aa26.2■■□□□ 1.78
VARS-224ENST00000479051 FLIIQ13045 1269 aa26.2■■□□□ 1.78
VARS-224ENST00000479051 KSR2Q6VAB6 950 aa26.2■■□□□ 1.78
VARS-224ENST00000479051 NLRP10Q86W26 655 aa26.2■■□□□ 1.78
VARS-224ENST00000479051 ZNF428Q96B54 188 aa26.2■■□□□ 1.78
VARS-224ENST00000479051 ANKRD31Q8N7Z5 1873 aa26.19■■□□□ 1.78
VARS-224ENST00000479051 NTSR2O95665 410 aa26.19■■□□□ 1.78
VARS-224ENST00000479051 YBX3P16989 372 aaKnown RBP eCLIP26.19■■□□□ 1.781e-21■□□□□ 8.4
VARS-224ENST00000479051 DALRD3Q5D0E6 543 aaKnown RBP26.19■■□□□ 1.78
VARS-224ENST00000479051 NUTM1Q86Y26 1132 aa26.19■■□□□ 1.78
VARS-224ENST00000479051 ISCA1Q9BUE6 129 aa26.19■■□□□ 1.78
VARS-224ENST00000479051 FKBP5Q13451 457 aaPredicted RBP26.18■■□□□ 1.78
VARS-224ENST00000479051 ERFEQ4G0M1 354 aa26.18■■□□□ 1.78
VARS-224ENST00000479051 G2E3Q7L622 706 aa26.18■■□□□ 1.78
VARS-224ENST00000479051 MAP3K2Q9Y2U5 619 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms