RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 MCM10Q7L590 875 aa17.31■□□□□ 0.36
ABCF3-212ENST00000478288 ZNF652Q9Y2D9 606 aa17.31■□□□□ 0.36
ABCF3-212ENST00000478288 USP16Q9Y5T5 823 aa17.31■□□□□ 0.36
ABCF3-212ENST00000478288 STYK1Q6J9G0 422 aa17.3■□□□□ 0.36
ABCF3-212ENST00000478288 SMC1BQ8NDV3 1235 aa17.3■□□□□ 0.36
ABCF3-212ENST00000478288 CNKSR1Q969H4 720 aa17.3■□□□□ 0.36
ABCF3-212ENST00000478288 ZNF622Q969S3 477 aaKnown RBP eCLIP17.3■□□□□ 0.36
ABCF3-212ENST00000478288 KDM3BQ7LBC6 1761 aa17.3■□□□□ 0.36
ABCF3-212ENST00000478288 SRGNP10124 158 aa17.29■□□□□ 0.36
ABCF3-212ENST00000478288 VEGFAP15692 232 aaPredicted RBP17.29■□□□□ 0.36
ABCF3-212ENST00000478288 SOGA3Q5TF21 947 aa17.29■□□□□ 0.36
ABCF3-212ENST00000478288 NPHP1O15259 732 aa17.27■□□□□ 0.36
ABCF3-212ENST00000478288 TAF7Q15545 349 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-212ENST00000478288 MASTLQ96GX5 879 aa17.27■□□□□ 0.36
ABCF3-212ENST00000478288 TAOK3Q9H2K8 898 aa17.27■□□□□ 0.36
ABCF3-212ENST00000478288 PRAMEF22A3QJZ6 481 aa17.26■□□□□ 0.35
ABCF3-212ENST00000478288 KLRG2A4D1S0 409 aaPredicted RBP17.26■□□□□ 0.35
ABCF3-212ENST00000478288 C21orf2O43822 256 aa17.26■□□□□ 0.35
ABCF3-212ENST00000478288 PRPF40BQ6NWY9 871 aaKnown RBP17.26■□□□□ 0.35
ABCF3-212ENST00000478288 NBPF5PQ86XG9 351 aaPredicted RBP17.26■□□□□ 0.35
ABCF3-212ENST00000478288 KLRG1Q96E93 195 aa17.26■□□□□ 0.35
ABCF3-212ENST00000478288 NBPF26B4DH59 902 aa17.25■□□□□ 0.35
ABCF3-212ENST00000478288 NEFMP07197 916 aa17.25■□□□□ 0.35
ABCF3-212ENST00000478288 DCTN1Q14203 1278 aa17.25■□□□□ 0.35
ABCF3-212ENST00000478288 DPY19L2Q6NUT2 758 aa17.25■□□□□ 0.35
ABCF3-212ENST00000478288 NBPF10Q6P3W6 841 aaKnown RBP17.25■□□□□ 0.35
ABCF3-212ENST00000478288 NBPF15Q8N660 670 aa17.25■□□□□ 0.35
ABCF3-212ENST00000478288 JMYQ8N9B5 988 aa17.25■□□□□ 0.35
ABCF3-212ENST00000478288 PNISRQ8TF01 805 aaKnown RBP17.25■□□□□ 0.35
ABCF3-212ENST00000478288 NUP98P52948 1817 aa17.24■□□□□ 0.35
ABCF3-212ENST00000478288 PIP4K2AP48426 406 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-212ENST00000478288 ERFEQ4G0M1 354 aa17.24■□□□□ 0.35
ABCF3-212ENST00000478288 CCDC24Q8N4L8 307 aa17.24■□□□□ 0.35
ABCF3-212ENST00000478288 NPR1P16066 1061 aa17.23■□□□□ 0.35
ABCF3-212ENST00000478288 TPTE2Q6XPS3 522 aa17.23■□□□□ 0.35
ABCF3-212ENST00000478288 C7orf43Q8WVR3 580 aa17.23■□□□□ 0.35
ABCF3-212ENST00000478288 PLEKHF1Q96S99 279 aa17.23■□□□□ 0.35
ABCF3-212ENST00000478288 SCN4AP35499 1836 aa17.22■□□□□ 0.35
ABCF3-212ENST00000478288 POTECB2RU33 542 aa17.22■□□□□ 0.35
ABCF3-212ENST00000478288 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
ABCF3-212ENST00000478288 PNNQ9H307 717 aaKnown RBP17.21■□□□□ 0.35
ABCF3-212ENST00000478288 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-212ENST00000478288 ERVV-1B6SEH8 477 aa17.2■□□□□ 0.34
ABCF3-212ENST00000478288 HTRA3P83110 453 aa17.2■□□□□ 0.34
ABCF3-212ENST00000478288 NFE2L2Q16236 605 aa17.2■□□□□ 0.34
ABCF3-212ENST00000478288 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
ABCF3-212ENST00000478288 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-212ENST00000478288 RIC1Q4ADV7 1423 aa17.2■□□□□ 0.34
ABCF3-212ENST00000478288 EIF4A1P60842 406 aaKnown RBP17.18■□□□□ 0.34
ABCF3-212ENST00000478288 L3MBTL3Q96JM7 780 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-212ENST00000478288 NYXQ9GZU5 481 aa17.18■□□□□ 0.34
ABCF3-212ENST00000478288 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
ABCF3-212ENST00000478288 ALDH1B1P30837 517 aa17.17■□□□□ 0.34
ABCF3-212ENST00000478288 FKBP4Q02790 459 aaKnown RBP eCLIP17.17■□□□□ 0.34
ABCF3-212ENST00000478288 HLFQ16534 295 aa17.17■□□□□ 0.34
ABCF3-212ENST00000478288 CRY2Q49AN0 593 aa17.17■□□□□ 0.34
ABCF3-212ENST00000478288 RTKN2Q8IZC4 609 aa17.17■□□□□ 0.34
ABCF3-212ENST00000478288 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
ABCF3-212ENST00000478288 MAP3K15Q6ZN16 1313 aa17.17■□□□□ 0.34
ABCF3-212ENST00000478288 MAPK8IP3Q9UPT6 1336 aa17.17■□□□□ 0.34
ABCF3-212ENST00000478288 SNED1Q8TER0 1413 aa17.16■□□□□ 0.34
ABCF3-212ENST00000478288 IQCA1LA6NCM1 817 aa17.16■□□□□ 0.34
ABCF3-212ENST00000478288 KIF6Q6ZMV9 814 aa17.15■□□□□ 0.34
ABCF3-212ENST00000478288 ABCC12Q96J65 1359 aa17.15■□□□□ 0.34
ABCF3-212ENST00000478288 DDNO94850 711 aaPredicted RBP17.14■□□□□ 0.33
ABCF3-212ENST00000478288 CHADLQ6NUI6 762 aa17.14■□□□□ 0.33
ABCF3-212ENST00000478288 BABAM1Q9NWV8 329 aa17.14■□□□□ 0.33
ABCF3-212ENST00000478288 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
ABCF3-212ENST00000478288 RALBP1Q15311 655 aa17.13■□□□□ 0.33
ABCF3-212ENST00000478288 CC2D2BQ6DHV5 1058 aa17.13■□□□□ 0.33
ABCF3-212ENST00000478288 PSMD1Q99460 953 aa17.13■□□□□ 0.33
ABCF3-212ENST00000478288 HOXA10P31260 410 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-212ENST00000478288 GRIPAP1Q4V328 841 aa17.12■□□□□ 0.33
ABCF3-212ENST00000478288 THUMPD2Q9BTF0 503 aaKnown RBP17.12■□□□□ 0.33
ABCF3-212ENST00000478288 ADAMTSL1Q8N6G6 1762 aa17.12■□□□□ 0.33
ABCF3-212ENST00000478288 ANKRD36CQ5JPF3 1778 aa17.11■□□□□ 0.33
ABCF3-212ENST00000478288 TTLL7Q6ZT98 887 aa17.11■□□□□ 0.33
ABCF3-212ENST00000478288 LDHDQ86WU2 507 aa17.11■□□□□ 0.33
ABCF3-212ENST00000478288 ZNF277Q9NRM2 450 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-212ENST00000478288 CREBZFQ9NS37 354 aa17.11■□□□□ 0.33
ABCF3-212ENST00000478288 RRP7AQ9Y3A4 280 aaKnown RBP17.11■□□□□ 0.33
ABCF3-212ENST00000478288 UBN2Q6ZU65 1347 aa17.11■□□□□ 0.33
ABCF3-212ENST00000478288 FAM177BA6PVY3 158 aa17.1■□□□□ 0.33
ABCF3-212ENST00000478288 FZD9O00144 591 aa17.1■□□□□ 0.33
ABCF3-212ENST00000478288 IARSP41252 1262 aaKnown RBP17.1■□□□□ 0.33
ABCF3-212ENST00000478288 LMOD3Q0VAK6 560 aa17.1■□□□□ 0.33
ABCF3-212ENST00000478288 GIGYF2Q6Y7W6 1299 aaKnown RBP17.1■□□□□ 0.33
ABCF3-212ENST00000478288 LRP10Q7Z4F1 713 aa17.1■□□□□ 0.33
ABCF3-212ENST00000478288 ZNF34Q8IZ26 560 aa17.1■□□□□ 0.33
ABCF3-212ENST00000478288 TAF1DQ9H5J8 278 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-212ENST00000478288 TSPYL4Q9UJ04 414 aa17.1■□□□□ 0.33
ABCF3-212ENST00000478288 MYL6BP14649 208 aa17.09■□□□□ 0.33
ABCF3-212ENST00000478288 PARP10Q53GL7 1025 aa17.09■□□□□ 0.33
ABCF3-212ENST00000478288 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
ABCF3-212ENST00000478288 NGEFQ8N5V2 710 aa17.09■□□□□ 0.33
ABCF3-212ENST00000478288 RNF123Q5XPI4 1314 aa17.09■□□□□ 0.33
ABCF3-212ENST00000478288 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
ABCF3-212ENST00000478288 PASKQ96RG2 1323 aa17.08■□□□□ 0.32
ABCF3-212ENST00000478288 NTSR2O95665 410 aa17.08■□□□□ 0.32
ABCF3-212ENST00000478288 POTEIP0CG38 1075 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms