RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 SOCS7O14512 581 aa14.88□□□□□ -0.03
CBWD3-206ENST00000478048 SLFN5Q08AF3 891 aa14.88□□□□□ -0.03
CBWD3-206ENST00000478048 DNAJC10Q8IXB1 793 aa14.88□□□□□ -0.03
CBWD3-206ENST00000478048 TAF1LQ8IZX4 1826 aa14.88□□□□□ -0.03
CBWD3-206ENST00000478048 RREB1Q92766 1687 aa14.88□□□□□ -0.03
CBWD3-206ENST00000478048 SLC27A3Q5K4L6 730 aa14.87□□□□□ -0.03
CBWD3-206ENST00000478048 C5P01031 1676 aa14.87□□□□□ -0.03
CBWD3-206ENST00000478048 NUP188Q5SRE5 1749 aa14.87□□□□□ -0.03
CBWD3-206ENST00000478048 ZNF831Q5JPB2 1677 aa14.86□□□□□ -0.03
CBWD3-206ENST00000478048 E9PSI1 815 aa14.86□□□□□ -0.03
CBWD3-206ENST00000478048 GIGYF1O75420 1035 aaPredicted RBP14.86□□□□□ -0.03
CBWD3-206ENST00000478048 VSIG10Q8N0Z9 540 aa14.86□□□□□ -0.03
CBWD3-206ENST00000478048 LINC00116Q8NCU8 138 aa14.86□□□□□ -0.03
CBWD3-206ENST00000478048 TMEM121BQ9BXQ6 578 aaPredicted RBP14.86□□□□□ -0.03
CBWD3-206ENST00000478048 USP16Q9Y5T5 823 aa14.86□□□□□ -0.03
CBWD3-206ENST00000478048 ELL2O00472 640 aaPredicted RBP14.86□□□□□ -0.03
CBWD3-206ENST00000478048 TSPYL6Q8N831 410 aa14.86□□□□□ -0.03
CBWD3-206ENST00000478048 C8orf58Q8NAV2 365 aa14.86□□□□□ -0.03
CBWD3-206ENST00000478048 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
CBWD3-206ENST00000478048 MYH14Q7Z406 1995 aaKnown RBP14.85□□□□□ -0.03
CBWD3-206ENST00000478048 SNRPA1P09661 255 aaKnown RBP14.85□□□□□ -0.03
CBWD3-206ENST00000478048 TRMT2AQ8IZ69 625 aaKnown RBP14.85□□□□□ -0.03
CBWD3-206ENST00000478048 CICQ96RK0 1608 aaPredicted RBP14.85□□□□□ -0.03
CBWD3-206ENST00000478048 COL5A3P25940 1745 aaPredicted RBP14.84□□□□□ -0.03
CBWD3-206ENST00000478048 EXOSC9Q06265 439 aaKnown RBP14.84□□□□□ -0.03
CBWD3-206ENST00000478048 DUSP27Q5VZP5 1158 aa14.84□□□□□ -0.03
CBWD3-206ENST00000478048 CYP19A1P11511 503 aaPredicted RBP14.83□□□□□ -0.03
CBWD3-206ENST00000478048 ANO8Q9HCE9 1232 aaPredicted RBP14.83□□□□□ -0.03
CBWD3-206ENST00000478048 C4BP0C0L5 1744 aa14.83□□□□□ -0.04
CBWD3-206ENST00000478048 CDAN1Q8IWY9 1227 aa14.83□□□□□ -0.04
CBWD3-206ENST00000478048 CRKLP46109 303 aaKnown RBP14.82□□□□□ -0.04
CBWD3-206ENST00000478048 ZNF827Q17R98 1081 aa14.82□□□□□ -0.04
CBWD3-206ENST00000478048 SMIM5Q71RC9 77 aa14.82□□□□□ -0.04
CBWD3-206ENST00000478048 LAMB4A4D0S4 1761 aa14.81□□□□□ -0.04
CBWD3-206ENST00000478048 A1BGP04217 495 aa14.81□□□□□ -0.04
CBWD3-206ENST00000478048 EIF2S2P20042 333 aaKnown RBP14.81□□□□□ -0.04
CBWD3-206ENST00000478048 PIP4K2AP48426 406 aaPredicted RBP14.81□□□□□ -0.04
CBWD3-206ENST00000478048 NECTIN2Q92692 538 aa14.81□□□□□ -0.04
CBWD3-206ENST00000478048 TEX13AQ9BXU3 409 aaPredicted RBP14.81□□□□□ -0.04
CBWD3-206ENST00000478048 TWISTNBQ3B726 338 aaPredicted RBP14.8□□□□□ -0.04
CBWD3-206ENST00000478048 INTS5Q6P9B9 1019 aaKnown RBP14.8□□□□□ -0.04
CBWD3-206ENST00000478048 AMIGO3Q86WK7 504 aa14.8□□□□□ -0.04
CBWD3-206ENST00000478048 ZBTB1Q9Y2K1 713 aa14.8□□□□□ -0.04
CBWD3-206ENST00000478048 CNTNAP4Q9C0A0 1308 aa14.8□□□□□ -0.04
CBWD3-206ENST00000478048 VAMP4O75379 141 aa14.8□□□□□ -0.04
CBWD3-206ENST00000478048 STARD3NLO95772 234 aa14.8□□□□□ -0.04
CBWD3-206ENST00000478048 HOXB7P09629 217 aa14.79□□□□□ -0.04
CBWD3-206ENST00000478048 CCDC87Q9NVE4 849 aa14.79□□□□□ -0.04
CBWD3-206ENST00000478048 TUBGCP6Q96RT7 1819 aa14.79□□□□□ -0.04
CBWD3-206ENST00000478048 NBPF26B4DH59 902 aa14.78□□□□□ -0.04
CBWD3-206ENST00000478048 G3V3G9 751 aa14.78□□□□□ -0.04
CBWD3-206ENST00000478048 GNPATO15228 680 aa14.78□□□□□ -0.04
CBWD3-206ENST00000478048 CANXP27824 592 aaKnown RBP14.78□□□□□ -0.04
CBWD3-206ENST00000478048 SLC15A2Q16348 729 aa14.78□□□□□ -0.04
CBWD3-206ENST00000478048 RC3H1Q5TC82 1133 aaKnown RBP14.78□□□□□ -0.04
CBWD3-206ENST00000478048 HDGFL1Q5TGJ6 251 aa14.78□□□□□ -0.04
CBWD3-206ENST00000478048 NBPF14Q5TI25 921 aa14.78□□□□□ -0.04
CBWD3-206ENST00000478048 NBPF10Q6P3W6 841 aaKnown RBP14.78□□□□□ -0.04
CBWD3-206ENST00000478048 NBPF15Q8N660 670 aa14.78□□□□□ -0.04
CBWD3-206ENST00000478048 AK7Q96M32 723 aa14.78□□□□□ -0.04
CBWD3-206ENST00000478048 UBR3Q6ZT12 1888 aa14.78□□□□□ -0.04
CBWD3-206ENST00000478048 TCERG1O14776 1098 aaKnown RBP14.78□□□□□ -0.04
CBWD3-206ENST00000478048 ANXA1P04083 346 aa14.78□□□□□ -0.04
CBWD3-206ENST00000478048 STK32BQ9NY57 414 aa14.78□□□□□ -0.04
CBWD3-206ENST00000478048 PDIA6Q15084 440 aa14.77□□□□□ -0.05
CBWD3-206ENST00000478048 PROSER3Q2NL68 480 aa14.77□□□□□ -0.05
CBWD3-206ENST00000478048 TFCP2L1Q9NZI6 479 aa14.77□□□□□ -0.05
CBWD3-206ENST00000478048 RPS6KA4O75676 772 aa14.76□□□□□ -0.05
CBWD3-206ENST00000478048 CHPF2Q9P2E5 772 aa14.76□□□□□ -0.05
CBWD3-206ENST00000478048 PHF14O94880 888 aa14.75□□□□□ -0.05
CBWD3-206ENST00000478048 MYL6BP14649 208 aa14.75□□□□□ -0.05
CBWD3-206ENST00000478048 ZNF330Q9Y3S2 320 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-206ENST00000478048 SOS1Q07889 1333 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-206ENST00000478048 LRP10Q7Z4F1 713 aa14.75□□□□□ -0.05
CBWD3-206ENST00000478048 PDGFDQ9GZP0 370 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-206ENST00000478048 RTCBQ9Y3I0 505 aaKnown RBP14.75□□□□□ -0.05
CBWD3-206ENST00000478048 PNPLA7Q6ZV29 1317 aa14.74□□□□□ -0.05
CBWD3-206ENST00000478048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.74□□□□□ -0.05
CBWD3-206ENST00000478048 HMGB2P26583 209 aaKnown RBP14.74□□□□□ -0.05
CBWD3-206ENST00000478048 EIF5P55010 431 aaKnown RBP14.74□□□□□ -0.05
CBWD3-206ENST00000478048 R3HDM1Q15032 1099 aaKnown RBP14.74□□□□□ -0.05
CBWD3-206ENST00000478048 CCDC30Q5VVM6 783 aa14.74□□□□□ -0.05
CBWD3-206ENST00000478048 BOLA1Q9Y3E2 137 aa14.74□□□□□ -0.05
CBWD3-206ENST00000478048 PSDA5PKW4 1024 aaPredicted RBP14.73□□□□□ -0.05
CBWD3-206ENST00000478048 IL6STP40189 918 aaPredicted RBP14.73□□□□□ -0.05
CBWD3-206ENST00000478048 DPY19L2Q6NUT2 758 aa14.73□□□□□ -0.05
CBWD3-206ENST00000478048 DDX21Q9NR30 783 aaKnown RBP eCLIP14.73□□□□□ -0.05
CBWD3-206ENST00000478048 ERBB4Q15303 1308 aa14.73□□□□□ -0.05
CBWD3-206ENST00000478048 COL15A1P39059 1388 aa14.73□□□□□ -0.05
CBWD3-206ENST00000478048 SSFA2P28290 1259 aa14.72□□□□□ -0.05
CBWD3-206ENST00000478048 COL23A1Q86Y22 540 aaPredicted RBP14.72□□□□□ -0.05
CBWD3-206ENST00000478048 ARHGEF1Q92888 912 aaKnown RBP14.72□□□□□ -0.05
CBWD3-206ENST00000478048 DBF4Q9UBU7 674 aaPredicted RBP14.72□□□□□ -0.05
CBWD3-206ENST00000478048 C4AP0C0L4 1744 aa14.72□□□□□ -0.05
CBWD3-206ENST00000478048 TRAPPC3LQ5T215 181 aa14.72□□□□□ -0.05
CBWD3-206ENST00000478048 PHAXQ9H814 394 aaKnown RBP14.72□□□□□ -0.05
CBWD3-206ENST00000478048 QSER1Q2KHR3 1735 aa14.71□□□□□ -0.05
CBWD3-206ENST00000478048 BCL2L13Q9BXK5 485 aa14.71□□□□□ -0.05
CBWD3-206ENST00000478048 TBC1D2BQ9UPU7 963 aa14.71□□□□□ -0.05
CBWD3-206ENST00000478048 RIOK3O14730 519 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms