RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PHACTR1Q9C0D0 580 aa5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 NUCKS1Q9H1E3 243 aaKnown RBP5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 RUBCNLQ9H714 662 aa5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 SLAIN2Q9P270 581 aa5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 A0A1W2PNR3 127 aa5.11□□□□□ -1.59
FNDC3B-209ENST00000478016 PTCD1O75127 700 aaKnown RBP5.11□□□□□ -1.59
FNDC3B-209ENST00000478016 WFS1O76024 890 aa5.11□□□□□ -1.59
FNDC3B-209ENST00000478016 RTN1Q16799 776 aa5.11□□□□□ -1.59
FNDC3B-209ENST00000478016 B4GALNT3Q6L9W6 998 aa5.11□□□□□ -1.59
FNDC3B-209ENST00000478016 FOXR1Q6PIV2 292 aa5.11□□□□□ -1.59
FNDC3B-209ENST00000478016 NLRP8Q86W28 1048 aa5.11□□□□□ -1.59
FNDC3B-209ENST00000478016 ALDH16A1Q8IZ83 802 aa5.11□□□□□ -1.59
FNDC3B-209ENST00000478016 RHPN1Q8TCX5 695 aa5.11□□□□□ -1.59
FNDC3B-209ENST00000478016 COL26A1Q96A83 441 aa5.11□□□□□ -1.59
FNDC3B-209ENST00000478016 NGLY1Q96IV0 654 aa5.11□□□□□ -1.59
FNDC3B-209ENST00000478016 GJA3Q9Y6H8 435 aa5.11□□□□□ -1.59
FNDC3B-209ENST00000478016 CARNS1A5YM72 827 aa5.1□□□□□ -1.59
FNDC3B-209ENST00000478016 SSFA2P28290 1259 aa5.1□□□□□ -1.59
FNDC3B-209ENST00000478016 ERBB4Q15303 1308 aa5.1□□□□□ -1.59
FNDC3B-209ENST00000478016 HIF1AQ16665 826 aa5.1□□□□□ -1.59
FNDC3B-209ENST00000478016 ZNF326Q5BKZ1 582 aaKnown RBP5.1□□□□□ -1.59
FNDC3B-209ENST00000478016 FIGNL1Q6PIW4 674 aa5.1□□□□□ -1.59
FNDC3B-209ENST00000478016 TREML4Q6UXN2 200 aa5.1□□□□□ -1.59
FNDC3B-209ENST00000478016 C7orf43Q8WVR3 580 aa5.1□□□□□ -1.59
FNDC3B-209ENST00000478016 GTPBP3Q969Y2 492 aaKnown RBP5.1□□□□□ -1.59
FNDC3B-209ENST00000478016 TRERF1Q96PN7 1200 aa5.1□□□□□ -1.59
FNDC3B-209ENST00000478016 ZIC5Q96T25 663 aa5.1□□□□□ -1.59
FNDC3B-209ENST00000478016 NEUROD4Q9HD90 331 aa5.1□□□□□ -1.59
FNDC3B-209ENST00000478016 THBS1P07996 1170 aa5.09□□□□□ -1.59
FNDC3B-209ENST00000478016 MYO19Q96H55 970 aa5.09□□□□□ -1.59
FNDC3B-209ENST00000478016 MKNK1Q9BUB5 465 aa5.09□□□□□ -1.59
FNDC3B-209ENST00000478016 QTRT2Q9H974 415 aaKnown RBP5.09□□□□□ -1.59
FNDC3B-209ENST00000478016 ANKIB1Q9P2G1 1089 aa5.09□□□□□ -1.59
FNDC3B-209ENST00000478016 SAMD5Q5TGI4 173 aa5.08□□□□□ -1.6
FNDC3B-209ENST00000478016 C16orf46Q6P387 395 aa5.08□□□□□ -1.6
FNDC3B-209ENST00000478016 LRRC69Q6ZNQ3 347 aa5.08□□□□□ -1.6
FNDC3B-209ENST00000478016 RGS22Q8NE09 1264 aa5.08□□□□□ -1.6
FNDC3B-209ENST00000478016 ZCCHC2Q9C0B9 1178 aaKnown RBP5.08□□□□□ -1.6
FNDC3B-209ENST00000478016 PHF24Q9UPV7 400 aa5.08□□□□□ -1.6
FNDC3B-209ENST00000478016 PCDHGC4Q9Y5F7 938 aa5.08□□□□□ -1.6
FNDC3B-209ENST00000478016 GPR25O00155 361 aa5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 ATXN7O15265 892 aaPredicted RBP5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 DGKZQ13574 1117 aa5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 UBAP2LQ14157 1087 aaKnown RBP5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 COX20Q5RI15 118 aa5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 PHLDB3Q6NSJ2 640 aa5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 CAPN12Q6ZSI9 719 aa5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 TICAM2Q86XR7 235 aa5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 GPR161Q8N6U8 529 aaKnown RBP5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 HSH2DQ96JZ2 352 aa5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 SUSD3Q96L08 255 aa5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 CFHR5Q9BXR6 569 aa5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 ATXN7L1Q9ULK2 861 aaPredicted RBP5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 MTMR7Q9Y216 660 aa5.07□□□□□ -1.6
FNDC3B-209ENST00000478016 TGFBR3LH3BV60 316 aa5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 FAM157BP0CG42 384 aa5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 GMPRP36959 345 aa5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 NAA30Q147X3 362 aaPredicted RBP5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 C11orf91Q3C1V1 193 aa5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 LCE2AQ5TA79 106 aaPredicted RBP5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 LCE2CQ5TA81 110 aa5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 IER5Q5VY09 327 aa5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 KLRG1Q96E93 195 aa5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 COL25A1Q9BXS0 654 aaPredicted RBP5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 SAP130Q9H0E3 1048 aa5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 NDFIP2Q9NV92 336 aa5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 KLK14Q9P0G3 267 aa5.06□□□□□ -1.6
FNDC3B-209ENST00000478016 DCDC2BA2VCK2 349 aa5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 KHNYNO15037 678 aaKnown RBP5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 BNIP3LO60238 219 aa5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 BRD1O95696 1058 aa5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 TNP2Q05952 138 aa5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 LAMC2Q13753 1193 aa5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 GAS6Q14393 721 aa5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 ZNF280CQ8ND82 737 aa5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 IFT43Q96FT9 208 aa5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 ABHD17AQ96GS6 310 aa5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 CEP63Q96MT8 703 aa5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 SEPT3Q9UH03 358 aa5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 LRFN2Q9ULH4 789 aa5.05□□□□□ -1.6
FNDC3B-209ENST00000478016 ABCC9O60706 1549 aa5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 EFSO43281 561 aa5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 MAPTP10636 758 aaKnown RBP5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 FGFR3P22607 806 aa5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 ARID4AP29374 1257 aaPredicted RBP5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 SCNN1AP37088 669 aa5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 TYRO3Q06418 890 aa5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 RNFT1Q5M7Z0 435 aa5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 BTLAQ7Z6A9 289 aa5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 HELQQ8TDG4 1101 aa5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 GTF3C2Q8WUA4 911 aaPredicted RBP5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 TRAIPQ9BWF2 469 aa5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 MBIPQ9NS73 344 aa5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 NSFL1CQ9UNZ2 370 aaKnown RBP5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 BCS1LQ9Y276 419 aa5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 CCDC180Q9P1Z9 1646 aa5.04□□□□□ -1.6
FNDC3B-209ENST00000478016 TNFRSF10BO14763 440 aa5.03□□□□□ -1.6
FNDC3B-209ENST00000478016 WIPF1O43516 503 aa5.03□□□□□ -1.6
FNDC3B-209ENST00000478016 MICAL2O94851 1124 aa5.03□□□□□ -1.6
FNDC3B-209ENST00000478016 CLSTN1O94985 981 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms