RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 DNAJC10Q8IXB1 793 aa15.33■□□□□ 0.04
LSM2-212ENST00000477182 CFAP44Q96MT7 982 aa15.33■□□□□ 0.04
LSM2-212ENST00000477182 BCL2L12Q9HB09 334 aa15.33■□□□□ 0.04
LSM2-212ENST00000477182 HACL1Q9UJ83 578 aa15.33■□□□□ 0.04
LSM2-212ENST00000477182 ANKRD31Q8N7Z5 1873 aa15.32■□□□□ 0.04
LSM2-212ENST00000477182 CYP19A1P11511 503 aaPredicted RBP15.32■□□□□ 0.04
LSM2-212ENST00000477182 CNTROBQ8N137 903 aa15.32■□□□□ 0.04
LSM2-212ENST00000477182 CNKSR1Q969H4 720 aa15.32■□□□□ 0.04
LSM2-212ENST00000477182 PDE4DIPQ5VU43 2346 aa15.32■□□□□ 0.04
LSM2-212ENST00000477182 IL13P35225 146 aa15.31■□□□□ 0.04
LSM2-212ENST00000477182 THSD7BQ9C0I4 1608 aa15.31■□□□□ 0.04
LSM2-212ENST00000477182 ADAMTSL1Q8N6G6 1762 aa15.31■□□□□ 0.04
LSM2-212ENST00000477182 U2SURPO15042 1029 aaKnown RBP15.3■□□□□ 0.04
LSM2-212ENST00000477182 EPHX2P34913 555 aa15.3■□□□□ 0.04
LSM2-212ENST00000477182 BICDL1Q6ZP65 573 aa15.3■□□□□ 0.04
LSM2-212ENST00000477182 PNISRQ8TF01 805 aaKnown RBP15.3■□□□□ 0.04
LSM2-212ENST00000477182 TNRC18O15417 2968 aaPredicted RBP15.3■□□□□ 0.04
LSM2-212ENST00000477182 SCN11AQ9UI33 1791 aa15.29■□□□□ 0.04
LSM2-212ENST00000477182 COL11A2P13942 1736 aaPredicted RBP15.29■□□□□ 0.04
LSM2-212ENST00000477182 A0A087WZG4 1122 aa15.29■□□□□ 0.04
LSM2-212ENST00000477182 WDR43Q15061 677 aaKnown RBP eCLIP15.29■□□□□ 0.04
LSM2-212ENST00000477182 STYK1Q6J9G0 422 aa15.29■□□□□ 0.04
LSM2-212ENST00000477182 CAPNS2Q96L46 248 aa15.29■□□□□ 0.04
LSM2-212ENST00000477182 NUDCQ9Y266 331 aa15.29■□□□□ 0.04
LSM2-212ENST00000477182 ZBTB1Q9Y2K1 713 aa15.29■□□□□ 0.04
LSM2-212ENST00000477182 CA12O43570 354 aa15.28■□□□□ 0.04
LSM2-212ENST00000477182 MAP1SQ66K74 1059 aaPredicted RBP15.28■□□□□ 0.04
LSM2-212ENST00000477182 PRPF40BQ6NWY9 871 aaKnown RBP15.28■□□□□ 0.04
LSM2-212ENST00000477182 PAXIP1Q6ZW49 1069 aaPredicted RBP15.28■□□□□ 0.04
LSM2-212ENST00000477182 FAM9BQ8IZU0 186 aa15.28■□□□□ 0.04
LSM2-212ENST00000477182 GPR101Q96P66 508 aaPredicted RBP15.28■□□□□ 0.04
LSM2-212ENST00000477182 CACNA1SQ13698 1873 aa15.28■□□□□ 0.04
LSM2-212ENST00000477182 SLX4Q8IY92 1834 aa15.28■□□□□ 0.04
LSM2-212ENST00000477182 ARFGEF2Q9Y6D5 1785 aa15.28■□□□□ 0.04
LSM2-212ENST00000477182 U2AF1L5P0DN76 240 aaPredicted RBP15.27■□□□□ 0.04
LSM2-212ENST00000477182 U2AF1Q01081 240 aaKnown RBP eCLIP15.27■□□□□ 0.04
LSM2-212ENST00000477182 PRR5LQ6MZQ0 368 aa15.27■□□□□ 0.04
LSM2-212ENST00000477182 VSIG10Q8N0Z9 540 aa15.27■□□□□ 0.04
LSM2-212ENST00000477182 MCOLN1Q9GZU1 580 aa15.27■□□□□ 0.04
LSM2-212ENST00000477182 DDX21Q9NR30 783 aaKnown RBP eCLIP15.27■□□□□ 0.04
LSM2-212ENST00000477182 NPHP1O15259 732 aa15.26■□□□□ 0.03
LSM2-212ENST00000477182 MAP2K2P36507 400 aa15.26■□□□□ 0.03
LSM2-212ENST00000477182 CCDC93Q567U6 631 aa15.26■□□□□ 0.03
LSM2-212ENST00000477182 MASTLQ96GX5 879 aa15.26■□□□□ 0.03
LSM2-212ENST00000477182 SLC52A2Q9HAB3 445 aa15.26■□□□□ 0.03
LSM2-212ENST00000477182 SRGNP10124 158 aa15.25■□□□□ 0.03
LSM2-212ENST00000477182 CANXP27824 592 aaKnown RBP15.25■□□□□ 0.03
LSM2-212ENST00000477182 TBC1D9BQ66K14 1250 aa15.25■□□□□ 0.03
LSM2-212ENST00000477182 ADAMTS8Q9UP79 889 aa15.25■□□□□ 0.03
LSM2-212ENST00000477182 ZNF541Q9H0D2 1346 aa15.24■□□□□ 0.03
LSM2-212ENST00000477182 HMOX1P09601 288 aa15.24■□□□□ 0.03
LSM2-212ENST00000477182 EIF5P55010 431 aaKnown RBP15.24■□□□□ 0.03
LSM2-212ENST00000477182 ST5P78524 1137 aa15.24■□□□□ 0.03
LSM2-212ENST00000477182 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
LSM2-212ENST00000477182 AKAP4Q5JQC9 854 aa15.24■□□□□ 0.03
LSM2-212ENST00000477182 AEBP1Q8IUX7 1158 aa15.24■□□□□ 0.03
LSM2-212ENST00000477182 CNBD1Q8NA66 436 aa15.24■□□□□ 0.03
LSM2-212ENST00000477182 RNF123Q5XPI4 1314 aa15.23■□□□□ 0.03
LSM2-212ENST00000477182 TRPM7Q96QT4 1865 aa15.23■□□□□ 0.03
LSM2-212ENST00000477182 STARD3NLO95772 234 aa15.23■□□□□ 0.03
LSM2-212ENST00000477182 GRM1Q13255 1194 aa15.23■□□□□ 0.03
LSM2-212ENST00000477182 SULT6B1Q6IMI4 303 aa15.23■□□□□ 0.03
LSM2-212ENST00000477182 CYP4F22Q6NT55 531 aa15.23■□□□□ 0.03
LSM2-212ENST00000477182 GPC2Q8N158 579 aa15.23■□□□□ 0.03
LSM2-212ENST00000477182 CASP8AP2Q9UKL3 1982 aa15.23■□□□□ 0.03
LSM2-212ENST00000477182 DGKZQ13574 1117 aa15.22■□□□□ 0.03
LSM2-212ENST00000477182 CCDC24Q8N4L8 307 aa15.22■□□□□ 0.03
LSM2-212ENST00000477182 SETDB2Q96T68 719 aa15.22■□□□□ 0.03
LSM2-212ENST00000477182 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
LSM2-212ENST00000477182 SCN7AQ01118 1682 aa15.22■□□□□ 0.03
LSM2-212ENST00000477182 LTBP1Q14766 1721 aa15.21■□□□□ 0.03
LSM2-212ENST00000477182 FZD9O00144 591 aa15.21■□□□□ 0.03
LSM2-212ENST00000477182 SLC39A6Q13433 755 aa15.21■□□□□ 0.03
LSM2-212ENST00000477182 RTKN2Q8IZC4 609 aa15.21■□□□□ 0.03
LSM2-212ENST00000477182 C7orf43Q8WVR3 580 aa15.21■□□□□ 0.03
LSM2-212ENST00000477182 RSPH6AQ9H0K4 717 aa15.21■□□□□ 0.03
LSM2-212ENST00000477182 ZNF277Q9NRM2 450 aaPredicted RBP15.21■□□□□ 0.03
LSM2-212ENST00000477182 TLL2Q9Y6L7 1015 aa15.21■□□□□ 0.03
LSM2-212ENST00000477182 MRC1P22897 1456 aa15.2■□□□□ 0.02
LSM2-212ENST00000477182 LMOD1P29536 600 aaPredicted RBP15.2■□□□□ 0.02
LSM2-212ENST00000477182 PRPF38BQ5VTL8 546 aaKnown RBP15.2■□□□□ 0.02
LSM2-212ENST00000477182 NPM2Q86SE8 214 aaKnown RBP15.2■□□□□ 0.02
LSM2-212ENST00000477182 CCDC146Q8IYE0 955 aa15.2■□□□□ 0.02
LSM2-212ENST00000477182 DLG5Q8TDM6 1919 aa15.19■□□□□ 0.02
LSM2-212ENST00000477182 PRKAR2BP31323 418 aa15.19■□□□□ 0.02
LSM2-212ENST00000477182 BRPF1P55201 1214 aaPredicted RBP15.19■□□□□ 0.02
LSM2-212ENST00000477182 RNMTO43148 476 aaKnown RBP15.18■□□□□ 0.02
LSM2-212ENST00000477182 NPR1P16066 1061 aa15.18■□□□□ 0.02
LSM2-212ENST00000477182 IARSP41252 1262 aaKnown RBP15.18■□□□□ 0.02
LSM2-212ENST00000477182 JDP2Q8WYK2 163 aa15.18■□□□□ 0.02
LSM2-212ENST00000477182 TEX13AQ9BXU3 409 aaPredicted RBP15.18■□□□□ 0.02
LSM2-212ENST00000477182 LGR6Q9HBX8 967 aa15.18■□□□□ 0.02
LSM2-212ENST00000477182 UBR2Q8IWV8 1755 aa15.17■□□□□ 0.02
LSM2-212ENST00000477182 AOC2O75106 756 aa15.17■□□□□ 0.02
LSM2-212ENST00000477182 EIF6P56537 245 aaKnown RBP15.17■□□□□ 0.02
LSM2-212ENST00000477182 CST9Q5W186 159 aa15.17■□□□□ 0.02
LSM2-212ENST00000477182 TTC5Q8N0Z6 440 aa15.17■□□□□ 0.02
LSM2-212ENST00000477182 RUNDC1Q96C34 613 aa15.17■□□□□ 0.02
LSM2-212ENST00000477182 HHIPL1Q96JK4 782 aa15.17■□□□□ 0.02
LSM2-212ENST00000477182 PLEKHF1Q96S99 279 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms