RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 PAXIP1Q6ZW49 1069 aaPredicted RBP21.2■□□□□ 0.98
SMG5-204ENST00000476954 SLC52A2Q9HAB3 445 aa21.2■□□□□ 0.98
SMG5-204ENST00000476954 CNKSR1Q969H4 720 aa21.19■□□□□ 0.98
SMG5-204ENST00000476954 ZNF277Q9NRM2 450 aaPredicted RBP21.19■□□□□ 0.98
SMG5-204ENST00000476954 PDZRN3Q9UPQ7 1066 aa21.19■□□□□ 0.98
SMG5-204ENST00000476954 SRGNP10124 158 aa21.18■□□□□ 0.98
SMG5-204ENST00000476954 EIF5P55010 431 aaKnown RBP21.18■□□□□ 0.98
SMG5-204ENST00000476954 CDCA8Q53HL2 280 aa21.18■□□□□ 0.98
SMG5-204ENST00000476954 STYK1Q6J9G0 422 aa21.18■□□□□ 0.98
SMG5-204ENST00000476954 BEGAINQ9BUH8 593 aa21.18■□□□□ 0.98
SMG5-204ENST00000476954 DDX21Q9NR30 783 aaKnown RBP eCLIP21.18■□□□□ 0.98
SMG5-204ENST00000476954 OLFM4Q6UX06 510 aa21.17■□□□□ 0.98
SMG5-204ENST00000476954 C7orf43Q8WVR3 580 aa21.17■□□□□ 0.98
SMG5-204ENST00000476954 GPR101Q96P66 508 aaPredicted RBP21.17■□□□□ 0.98
SMG5-204ENST00000476954 MRC1P22897 1456 aa21.16■□□□□ 0.98
SMG5-204ENST00000476954 AOC2O75106 756 aa21.16■□□□□ 0.98
SMG5-204ENST00000476954 SULT6B1Q6IMI4 303 aa21.16■□□□□ 0.98
SMG5-204ENST00000476954 TBC1D2BQ9UPU7 963 aa21.16■□□□□ 0.98
SMG5-204ENST00000476954 UBR2Q8IWV8 1755 aa21.15■□□□□ 0.98
SMG5-204ENST00000476954 PNMA8AQ86V59 439 aaPredicted RBP21.15■□□□□ 0.98
SMG5-204ENST00000476954 TRPM7Q96QT4 1865 aa21.15■□□□□ 0.98
SMG5-204ENST00000476954 SOGA3Q5TF21 947 aa21.14■□□□□ 0.97
SMG5-204ENST00000476954 CNBD1Q8NA66 436 aa21.14■□□□□ 0.97
SMG5-204ENST00000476954 MASTLQ96GX5 879 aa21.14■□□□□ 0.97
SMG5-204ENST00000476954 ZNF330Q9Y3S2 320 aaPredicted RBP21.14■□□□□ 0.97
SMG5-204ENST00000476954 RNMTO43148 476 aaKnown RBP21.13■□□□□ 0.97
SMG5-204ENST00000476954 CCDC93Q567U6 631 aa21.13■□□□□ 0.97
SMG5-204ENST00000476954 AKAP4Q5JQC9 854 aa21.13■□□□□ 0.97
SMG5-204ENST00000476954 A0A087WZG4 1122 aa21.12■□□□□ 0.97
SMG5-204ENST00000476954 TRAF5O00463 557 aa21.12■□□□□ 0.97
SMG5-204ENST00000476954 ECE1P42892 770 aa21.12■□□□□ 0.97
SMG5-204ENST00000476954 FKBP4Q02790 459 aaKnown RBP eCLIP21.12■□□□□ 0.97
SMG5-204ENST00000476954 DGKZQ13574 1117 aa21.11■□□□□ 0.97
SMG5-204ENST00000476954 CST9Q5W186 159 aa21.11■□□□□ 0.97
SMG5-204ENST00000476954 NPHP1O15259 732 aa21.1■□□□□ 0.97
SMG5-204ENST00000476954 VSIG10Q8N0Z9 540 aa21.1■□□□□ 0.97
SMG5-204ENST00000476954 FZD9O00144 591 aa21.09■□□□□ 0.97
SMG5-204ENST00000476954 SETDB2Q96T68 719 aa21.09■□□□□ 0.97
SMG5-204ENST00000476954 COL4A5P29400 1685 aa21.09■□□□□ 0.97
SMG5-204ENST00000476954 ST5P78524 1137 aa21.08■□□□□ 0.97
SMG5-204ENST00000476954 STARD3NLO95772 234 aa21.07■□□□□ 0.96
SMG5-204ENST00000476954 IARSP41252 1262 aaKnown RBP21.07■□□□□ 0.96
SMG5-204ENST00000476954 GPC2Q8N158 579 aa21.07■□□□□ 0.96
SMG5-204ENST00000476954 GJA3Q9Y6H8 435 aa21.07■□□□□ 0.96
SMG5-204ENST00000476954 TLL2Q9Y6L7 1015 aa21.07■□□□□ 0.96
SMG5-204ENST00000476954 BCORQ6W2J9 1755 aa21.07■□□□□ 0.96
SMG5-204ENST00000476954 CAMTA2O94983 1202 aa21.06■□□□□ 0.96
SMG5-204ENST00000476954 SOX10P56693 466 aa21.06■□□□□ 0.96
SMG5-204ENST00000476954 SYNE4Q8N205 404 aa21.06■□□□□ 0.96
SMG5-204ENST00000476954 IL13P35225 146 aa21.05■□□□□ 0.96
SMG5-204ENST00000476954 MAP2K2P36507 400 aa21.05■□□□□ 0.96
SMG5-204ENST00000476954 EPS15P42566 896 aa21.05■□□□□ 0.96
SMG5-204ENST00000476954 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
SMG5-204ENST00000476954 ZNF496Q96IT1 587 aaPredicted RBP21.04■□□□□ 0.96
SMG5-204ENST00000476954 A1BGP04217 495 aa21.03■□□□□ 0.96
SMG5-204ENST00000476954 NPR1P16066 1061 aa21.03■□□□□ 0.96
SMG5-204ENST00000476954 IL6STP40189 918 aaPredicted RBP21.02■□□□□ 0.96
SMG5-204ENST00000476954 SCNN1DP51172 638 aa21.02■□□□□ 0.96
SMG5-204ENST00000476954 CIAPIN1Q6FI81 312 aa21.01■□□□□ 0.95
SMG5-204ENST00000476954 RTKN2Q8IZC4 609 aa21.01■□□□□ 0.95
SMG5-204ENST00000476954 TTC5Q8N0Z6 440 aa21.01■□□□□ 0.95
SMG5-204ENST00000476954 HEG1Q9ULI3 1381 aa21■□□□□ 0.95
SMG5-204ENST00000476954 HMOX1P09601 288 aa21■□□□□ 0.95
SMG5-204ENST00000476954 LMOD1P29536 600 aaPredicted RBP21■□□□□ 0.95
SMG5-204ENST00000476954 PIP4K2AP48426 406 aaPredicted RBP21■□□□□ 0.95
SMG5-204ENST00000476954 MTHFSDQ2M296 383 aaKnown RBP21■□□□□ 0.95
SMG5-204ENST00000476954 SAPCD2Q86UD0 394 aa21■□□□□ 0.95
SMG5-204ENST00000476954 NBPF5PQ86XG9 351 aaPredicted RBP21■□□□□ 0.95
SMG5-204ENST00000476954 ZIC5Q96T25 663 aa21■□□□□ 0.95
SMG5-204ENST00000476954 SNED1Q8TER0 1413 aa21■□□□□ 0.95
SMG5-204ENST00000476954 CA12O43570 354 aa20.99■□□□□ 0.95
SMG5-204ENST00000476954 KLRG2A4D1S0 409 aaPredicted RBP20.98■□□□□ 0.95
SMG5-204ENST00000476954 BRPF1P55201 1214 aaPredicted RBP20.98■□□□□ 0.95
SMG5-204ENST00000476954 EIF6P56537 245 aaKnown RBP20.98■□□□□ 0.95
SMG5-204ENST00000476954 SLC51AQ86UW1 340 aa20.98■□□□□ 0.95
SMG5-204ENST00000476954 DZIP3Q86Y13 1208 aaKnown RBP20.98■□□□□ 0.95
SMG5-204ENST00000476954 JDP2Q8WYK2 163 aa20.98■□□□□ 0.95
SMG5-204ENST00000476954 CELF2O95319 508 aaKnown RBP20.97■□□□□ 0.95
SMG5-204ENST00000476954 PRPF38BQ5VTL8 546 aaKnown RBP20.97■□□□□ 0.95
SMG5-204ENST00000476954 SIPA1L3O60292 1781 aaPredicted RBP20.96■□□□□ 0.95
SMG5-204ENST00000476954 FAM177BA6PVY3 158 aa20.96■□□□□ 0.95
SMG5-204ENST00000476954 MORC1Q86VD1 984 aa20.96■□□□□ 0.95
SMG5-204ENST00000476954 USP50Q70EL3 339 aaPredicted RBP20.95■□□□□ 0.94
SMG5-204ENST00000476954 GLIS2Q9BZE0 524 aaPredicted RBP20.95■□□□□ 0.94
SMG5-204ENST00000476954 ZNF790Q6PG37 636 aa20.94■□□□□ 0.94
SMG5-204ENST00000476954 PSMD1Q99460 953 aa20.94■□□□□ 0.94
SMG5-204ENST00000476954 TEX13AQ9BXU3 409 aaPredicted RBP20.94■□□□□ 0.94
SMG5-204ENST00000476954 NPM2Q86SE8 214 aaKnown RBP20.93■□□□□ 0.94
SMG5-204ENST00000476954 PANK3Q9H999 370 aa20.93■□□□□ 0.94
SMG5-204ENST00000476954 KCNQ3O43525 872 aa20.92■□□□□ 0.94
SMG5-204ENST00000476954 ZNF408Q9H9D4 720 aa20.92■□□□□ 0.94
SMG5-204ENST00000476954 LARGE2Q8N3Y3 721 aa20.91■□□□□ 0.94
SMG5-204ENST00000476954 IL17REQ8NFR9 667 aa20.91■□□□□ 0.94
SMG5-204ENST00000476954 ALDH1B1P30837 517 aa20.9■□□□□ 0.94
SMG5-204ENST00000476954 HHIPL1Q96JK4 782 aa20.9■□□□□ 0.94
SMG5-204ENST00000476954 PRAMEF22A3QJZ6 481 aa20.89■□□□□ 0.93
SMG5-204ENST00000476954 TPTE2Q6XPS3 522 aa20.89■□□□□ 0.93
SMG5-204ENST00000476954 NIP7Q9Y221 180 aaKnown RBP eCLIP20.89■□□□□ 0.93
SMG5-204ENST00000476954 USP16Q9Y5T5 823 aa20.89■□□□□ 0.93
SMG5-204ENST00000476954 TEFQ10587 303 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms