RNA–Protein interactions for RNA: ENST00000476652.2

CEP78-208, Transcript of centrosomal protein 78, human

TSL 3

Gene CEP78, Length 634 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEP78-208	ENST00000476652	NUP98	P52948	1817 aa		28.08	■■■□□ 2.09
CEP78-208	ENST00000476652	NFKBIE	O00221	500 aa		28.08	■■■□□ 2.09
CEP78-208	ENST00000476652	NPHP1	O15259	732 aa		28.08	■■■□□ 2.09
CEP78-208	ENST00000476652	WDR90	Q96KV7	1748 aa		28.08	■■■□□ 2.09
CEP78-208	ENST00000476652	ST5	P78524	1137 aa		28.07	■■■□□ 2.08
CEP78-208	ENST00000476652	CLEC4G	Q6UXB4	293 aa		28.07	■■■□□ 2.08
CEP78-208	ENST00000476652	C16orf71	Q8IYS4	520 aa	Predicted RBP	28.06	■■■□□ 2.08
CEP78-208	ENST00000476652	RBM46	Q8TBY0	533 aa	Known RBP	28.06	■■■□□ 2.08
CEP78-208	ENST00000476652	RRAGC	Q9HB90	399 aa		28.06	■■■□□ 2.08
CEP78-208	ENST00000476652	ZNF652	Q9Y2D9	606 aa		28.06	■■■□□ 2.08
CEP78-208	ENST00000476652	NFE2L2	Q16236	605 aa		28.05	■■■□□ 2.08
CEP78-208	ENST00000476652	C21orf2	O43822	256 aa		28.04	■■■□□ 2.08
CEP78-208	ENST00000476652	APLP1	P51693	650 aa		28.04	■■■□□ 2.08
CEP78-208	ENST00000476652	THUMPD2	Q9BTF0	503 aa	Known RBP	28.04	■■■□□ 2.08
CEP78-208	ENST00000476652	ZNF219	Q9P2Y4	722 aa	Predicted RBP	28.04	■■■□□ 2.08
CEP78-208	ENST00000476652	MAPK8IP3	Q9UPT6	1336 aa		28.03	■■■□□ 2.08
CEP78-208	ENST00000476652	NBPF5P	Q86XG9	351 aa	Predicted RBP	28.03	■■■□□ 2.08
CEP78-208	ENST00000476652	PNISR	Q8TF01	805 aa	Known RBP	28.03	■■■□□ 2.08
CEP78-208	ENST00000476652	SRGN	P10124	158 aa		28.02	■■■□□ 2.08
CEP78-208	ENST00000476652	RGL2	O15211	777 aa		28.01	■■■□□ 2.07
CEP78-208	ENST00000476652	STYK1	Q6J9G0	422 aa		28.01	■■■□□ 2.07
CEP78-208	ENST00000476652	CNKSR1	Q969H4	720 aa		28.01	■■■□□ 2.07
CEP78-208	ENST00000476652	PNN	Q9H307	717 aa	Known RBP	28.01	■■■□□ 2.07
CEP78-208	ENST00000476652	NIP7	Q9Y221	180 aa	Known RBP eCLIP	28	■■■□□ 2.07
CEP78-208	ENST00000476652	GLTPD2	A6NH11	291 aa		27.99	■■■□□ 2.07
CEP78-208	ENST00000476652	EIF4A1	P60842	406 aa	Known RBP	27.99	■■■□□ 2.07
CEP78-208	ENST00000476652	PRPF40B	Q6NWY9	871 aa	Known RBP	27.99	■■■□□ 2.07
CEP78-208	ENST00000476652	MASTL	Q96GX5	879 aa		27.99	■■■□□ 2.07
CEP78-208	ENST00000476652	HLF	Q16534	295 aa		27.98	■■■□□ 2.07
CEP78-208	ENST00000476652	FSTL1	Q12841	308 aa		27.97	■■■□□ 2.07
CEP78-208	ENST00000476652	RALBP1	Q15311	655 aa		27.97	■■■□□ 2.07
CEP78-208	ENST00000476652	TPTE2	Q6XPS3	522 aa		27.96	■■■□□ 2.07
CEP78-208	ENST00000476652	LTBP3	Q9NS15	1303 aa		27.95	■■■□□ 2.07
CEP78-208	ENST00000476652	FAM177B	A6PVY3	158 aa		27.95	■■■□□ 2.06
CEP78-208	ENST00000476652	NGEF	Q8N5V2	710 aa		27.95	■■■□□ 2.06
CEP78-208	ENST00000476652	TAOK3	Q9H2K8	898 aa		27.95	■■■□□ 2.06
CEP78-208	ENST00000476652	ERFE	Q4G0M1	354 aa		27.93	■■■□□ 2.06
CEP78-208	ENST00000476652	RRP7A	Q9Y3A4	280 aa	Known RBP	27.93	■■■□□ 2.06
CEP78-208	ENST00000476652	KLRG2	A4D1S0	409 aa	Predicted RBP	27.92	■■■□□ 2.06
CEP78-208	ENST00000476652	VEGFA	P15692	232 aa	Predicted RBP	27.92	■■■□□ 2.06
CEP78-208	ENST00000476652	NPR1	P16066	1061 aa		27.92	■■■□□ 2.06
CEP78-208	ENST00000476652	SOGA3	Q5TF21	947 aa		27.92	■■■□□ 2.06
CEP78-208	ENST00000476652	DNAJC5G	Q8N7S2	189 aa		27.92	■■■□□ 2.06
CEP78-208	ENST00000476652	DDX10	Q13206	875 aa	Known RBP	27.91	■■■□□ 2.06
CEP78-208	ENST00000476652	SMC1B	Q8NDV3	1235 aa		27.91	■■■□□ 2.06
CEP78-208	ENST00000476652	MAP3K15	Q6ZN16	1313 aa		27.91	■■■□□ 2.06
CEP78-208	ENST00000476652	ERVV-1	B6SEH8	477 aa		27.9	■■■□□ 2.06
CEP78-208	ENST00000476652	MYL6B	P14649	208 aa		27.9	■■■□□ 2.06
CEP78-208	ENST00000476652	RIPK4	P57078	832 aa		27.9	■■■□□ 2.06
CEP78-208	ENST00000476652	TTLL7	Q6ZT98	887 aa		27.9	■■■□□ 2.06
CEP78-208	ENST00000476652	HTRA3	P83110	453 aa		27.89	■■■□□ 2.06
CEP78-208	ENST00000476652	DPY19L2	Q6NUT2	758 aa		27.89	■■■□□ 2.06
CEP78-208	ENST00000476652	KIF6	Q6ZMV9	814 aa		27.89	■■■□□ 2.06
CEP78-208	ENST00000476652	C7orf43	Q8WVR3	580 aa		27.89	■■■□□ 2.06
CEP78-208	ENST00000476652	TSPYL4	Q9UJ04	414 aa		27.89	■■■□□ 2.06
CEP78-208	ENST00000476652	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.88	■■■□□ 2.05
CEP78-208	ENST00000476652	ABCC12	Q96J65	1359 aa		27.87	■■■□□ 2.05
CEP78-208	ENST00000476652	ANKRD36C	Q5JPF3	1778 aa		27.87	■■■□□ 2.05
CEP78-208	ENST00000476652	POTEC	B2RU33	542 aa		27.87	■■■□□ 2.05
CEP78-208	ENST00000476652	GTF2E1	P29083	439 aa	Predicted RBP	27.87	■■■□□ 2.05
CEP78-208	ENST00000476652	CCDC93	Q567U6	631 aa		27.87	■■■□□ 2.05
CEP78-208	ENST00000476652	TMPO	P42166	694 aa	Known RBP	27.86	■■■□□ 2.05
CEP78-208	ENST00000476652	NYX	Q9GZU5	481 aa		27.86	■■■□□ 2.05
CEP78-208	ENST00000476652	ZBTB3	Q9H5J0	574 aa		27.86	■■■□□ 2.05
CEP78-208	ENST00000476652	ERBB4	Q15303	1308 aa		27.86	■■■□□ 2.05
CEP78-208	ENST00000476652	NUTM1	Q86Y26	1132 aa		27.85	■■■□□ 2.05
CEP78-208	ENST00000476652	SCN4A	P35499	1836 aa		27.84	■■■□□ 2.05
CEP78-208	ENST00000476652	UBN2	Q6ZU65	1347 aa		27.84	■■■□□ 2.05
CEP78-208	ENST00000476652	GPT	P24298	496 aa		27.83	■■■□□ 2.05
CEP78-208	ENST00000476652	LMOD3	Q0VAK6	560 aa		27.83	■■■□□ 2.05
CEP78-208	ENST00000476652	OLFM4	Q6UX06	510 aa		27.83	■■■□□ 2.05
CEP78-208	ENST00000476652	IBTK	Q9P2D0	1353 aa	Predicted RBP	27.83	■■■□□ 2.05
CEP78-208	ENST00000476652	ZEB1	P37275	1124 aa	Predicted RBP	27.82	■■■□□ 2.04
CEP78-208	ENST00000476652	CCDC146	Q8IYE0	955 aa		27.82	■■■□□ 2.04
CEP78-208	ENST00000476652	BABAM1	Q9NWV8	329 aa		27.82	■■■□□ 2.04
CEP78-208	ENST00000476652	DDN	O94850	711 aa	Predicted RBP	27.81	■■■□□ 2.04
CEP78-208	ENST00000476652	EIF2S2	P20042	333 aa	Known RBP	27.81	■■■□□ 2.04
CEP78-208	ENST00000476652	ALDH1B1	P30837	517 aa		27.81	■■■□□ 2.04
CEP78-208	ENST00000476652	FKBP4	Q02790	459 aa	Known RBP eCLIP	27.81	■■■□□ 2.04
CEP78-208	ENST00000476652	CRY2	Q49AN0	593 aa		27.81	■■■□□ 2.04
CEP78-208	ENST00000476652	RIC1	Q4ADV7	1423 aa		27.81	■■■□□ 2.04
CEP78-208	ENST00000476652	PDIA6	Q15084	440 aa		27.8	■■■□□ 2.04
CEP78-208	ENST00000476652	LRP10	Q7Z4F1	713 aa		27.8	■■■□□ 2.04
CEP78-208	ENST00000476652	KLRG1	Q96E93	195 aa		27.8	■■■□□ 2.04
CEP78-208	ENST00000476652	LAMB2	P55268	1798 aa		27.79	■■■□□ 2.04
CEP78-208	ENST00000476652	NEUROD2	Q15784	382 aa		27.79	■■■□□ 2.04
CEP78-208	ENST00000476652	SUSD4	Q5VX71	490 aa		27.79	■■■□□ 2.04
CEP78-208	ENST00000476652	GIGYF2	Q6Y7W6	1299 aa	Known RBP	27.79	■■■□□ 2.04
CEP78-208	ENST00000476652	ZNF34	Q8IZ26	560 aa		27.79	■■■□□ 2.04
CEP78-208	ENST00000476652	ZNF277	Q9NRM2	450 aa	Predicted RBP	27.79	■■■□□ 2.04
CEP78-208	ENST00000476652	RTKN2	Q8IZC4	609 aa		27.78	■■■□□ 2.04
CEP78-208	ENST00000476652	SNED1	Q8TER0	1413 aa		27.77	■■■□□ 2.04
CEP78-208	ENST00000476652	ANXA1	P04083	346 aa		27.77	■■■□□ 2.04
CEP78-208	ENST00000476652	PROSER3	Q2NL68	480 aa		27.77	■■■□□ 2.04
CEP78-208	ENST00000476652	NTSR2	O95665	410 aa		27.76	■■■□□ 2.03
CEP78-208	ENST00000476652	WDR43	Q15061	677 aa	Known RBP eCLIP	27.76	■■■□□ 2.03
CEP78-208	ENST00000476652	IFFO2	Q5TF58	517 aa		27.75	■■■□□ 2.03
CEP78-208	ENST00000476652	RPGR	Q92834	1020 aa	Known RBP	27.75	■■■□□ 2.03
CEP78-208	ENST00000476652	RUNDC1	Q96C34	613 aa		27.75	■■■□□ 2.03
CEP78-208	ENST00000476652	NECTIN2	Q92692	538 aa		27.74	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms