RNA–Protein interactions for RNA: ENST00000476535.1

LCLAT1-208, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 4

Gene LCLAT1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-208ENST00000476535 NPHP1O15259 732 aa23.18■■□□□ 1.3
LCLAT1-208ENST00000476535 RUNDC1Q96C34 613 aa23.18■■□□□ 1.3
LCLAT1-208ENST00000476535 ARFGEF2Q9Y6D5 1785 aa23.17■■□□□ 1.3
LCLAT1-208ENST00000476535 SENP3-EIF4A1A0A087X0R7 540 aa23.17■■□□□ 1.3
LCLAT1-208ENST00000476535 KIF3CO14782 793 aa23.17■■□□□ 1.3
LCLAT1-208ENST00000476535 NBPF5PQ86XG9 351 aaPredicted RBP23.17■■□□□ 1.3
LCLAT1-208ENST00000476535 CCDC24Q8N4L8 307 aa23.17■■□□□ 1.3
LCLAT1-208ENST00000476535 ERVV-1B6SEH8 477 aa23.16■■□□□ 1.3
LCLAT1-208ENST00000476535 CCDC146Q8IYE0 955 aa23.16■■□□□ 1.3
LCLAT1-208ENST00000476535 RNF181Q9P0P0 153 aa23.16■■□□□ 1.3
LCLAT1-208ENST00000476535 NIP7Q9Y221 180 aaKnown RBP eCLIP23.16■■□□□ 1.3
LCLAT1-208ENST00000476535 ZC3H4Q9UPT8 1303 aaKnown RBP23.15■■□□□ 1.3
LCLAT1-208ENST00000476535 ZNF622Q969S3 477 aaKnown RBP eCLIP23.15■■□□□ 1.3
LCLAT1-208ENST00000476535 CCDC88AQ3V6T2 1871 aa23.15■■□□□ 1.3
LCLAT1-208ENST00000476535 MAP3K15Q6ZN16 1313 aa23.14■■□□□ 1.3
LCLAT1-208ENST00000476535 FER1L6Q2WGJ9 1857 aa23.14■■□□□ 1.29
LCLAT1-208ENST00000476535 SRGNP10124 158 aa23.14■■□□□ 1.29
LCLAT1-208ENST00000476535 ZEB1P37275 1124 aaPredicted RBP23.14■■□□□ 1.29
LCLAT1-208ENST00000476535 HLFQ16534 295 aa23.14■■□□□ 1.29
LCLAT1-208ENST00000476535 STYK1Q6J9G0 422 aa23.14■■□□□ 1.29
LCLAT1-208ENST00000476535 ADAMTS8Q9UP79 889 aa23.14■■□□□ 1.29
LCLAT1-208ENST00000476535 RASSF7Q02833 373 aa23.13■■□□□ 1.29
LCLAT1-208ENST00000476535 TPTE2Q6XPS3 522 aa23.13■■□□□ 1.29
LCLAT1-208ENST00000476535 CNKSR1Q969H4 720 aa23.13■■□□□ 1.29
LCLAT1-208ENST00000476535 RRP7AQ9Y3A4 280 aaKnown RBP23.13■■□□□ 1.29
LCLAT1-208ENST00000476535 CACNA1SQ13698 1873 aa23.13■■□□□ 1.29
LCLAT1-208ENST00000476535 SLX4Q8IY92 1834 aa23.12■■□□□ 1.29
LCLAT1-208ENST00000476535 CEP350Q5VT06 3117 aa23.12■■□□□ 1.29
LCLAT1-208ENST00000476535 KLRG2A4D1S0 409 aaPredicted RBP23.12■■□□□ 1.29
LCLAT1-208ENST00000476535 LMNB1P20700 586 aa23.12■■□□□ 1.29
LCLAT1-208ENST00000476535 KIF6Q6ZMV9 814 aa23.12■■□□□ 1.29
LCLAT1-208ENST00000476535 MASTLQ96GX5 879 aa23.12■■□□□ 1.29
LCLAT1-208ENST00000476535 NEUROD2Q15784 382 aa23.11■■□□□ 1.29
LCLAT1-208ENST00000476535 NGEFQ8N5V2 710 aa23.11■■□□□ 1.29
LCLAT1-208ENST00000476535 TRIM35Q9UPQ4 493 aa23.11■■□□□ 1.29
LCLAT1-208ENST00000476535 NFKBIEO00221 500 aa23.1■■□□□ 1.29
LCLAT1-208ENST00000476535 CHL1O00533 1208 aa23.1■■□□□ 1.29
LCLAT1-208ENST00000476535 MYL6BP14649 208 aa23.1■■□□□ 1.29
LCLAT1-208ENST00000476535 TTLL7Q6ZT98 887 aa23.1■■□□□ 1.29
LCLAT1-208ENST00000476535 DICER1Q9UPY3 1922 aaKnown RBP23.1■■□□□ 1.29
LCLAT1-208ENST00000476535 TNRC6CQ9HCJ0 1690 aaKnown RBP23.09■■□□□ 1.29
LCLAT1-208ENST00000476535 KDM2BQ8NHM5 1336 aa23.09■■□□□ 1.29
LCLAT1-208ENST00000476535 TIAM2Q8IVF5 1701 aa23.09■■□□□ 1.29
LCLAT1-208ENST00000476535 LRP10Q7Z4F1 713 aa23.09■■□□□ 1.29
LCLAT1-208ENST00000476535 NMRK2Q9NPI5 230 aa23.09■■□□□ 1.29
LCLAT1-208ENST00000476535 IBTKQ9P2D0 1353 aaPredicted RBP23.09■■□□□ 1.29
LCLAT1-208ENST00000476535 C21orf2O43822 256 aa23.08■■□□□ 1.29
LCLAT1-208ENST00000476535 PRELPP51888 382 aa23.08■■□□□ 1.29
LCLAT1-208ENST00000476535 PRPF40BQ6NWY9 871 aaKnown RBP23.08■■□□□ 1.29
LCLAT1-208ENST00000476535 NYXQ9GZU5 481 aa23.08■■□□□ 1.29
LCLAT1-208ENST00000476535 LTBP3Q9NS15 1303 aa23.08■■□□□ 1.28
LCLAT1-208ENST00000476535 NPR1P16066 1061 aa23.07■■□□□ 1.28
LCLAT1-208ENST00000476535 PDIA6Q15084 440 aa23.07■■□□□ 1.28
LCLAT1-208ENST00000476535 SOGA3Q5TF21 947 aa23.07■■□□□ 1.28
LCLAT1-208ENST00000476535 TOMM70O94826 608 aa23.06■■□□□ 1.28
LCLAT1-208ENST00000476535 EIF2S2P20042 333 aaKnown RBP23.06■■□□□ 1.28
LCLAT1-208ENST00000476535 GIGYF2Q6Y7W6 1299 aaKnown RBP23.06■■□□□ 1.28
LCLAT1-208ENST00000476535 RIC1Q4ADV7 1423 aa23.06■■□□□ 1.28
LCLAT1-208ENST00000476535 FAM177BA6PVY3 158 aa23.05■■□□□ 1.28
LCLAT1-208ENST00000476535 ZBTB3Q9H5J0 574 aa23.05■■□□□ 1.28
LCLAT1-208ENST00000476535 HSPA6P17066 643 aa23.04■■□□□ 1.28
LCLAT1-208ENST00000476535 GTF2E1P29083 439 aaPredicted RBP23.04■■□□□ 1.28
LCLAT1-208ENST00000476535 ZNF34Q8IZ26 560 aa23.04■■□□□ 1.28
LCLAT1-208ENST00000476535 UBN2Q6ZU65 1347 aa23.04■■□□□ 1.28
LCLAT1-208ENST00000476535 ABCC12Q96J65 1359 aa23.03■■□□□ 1.28
LCLAT1-208ENST00000476535 HOXB7P09629 217 aa23.03■■□□□ 1.28
LCLAT1-208ENST00000476535 PROSER3Q2NL68 480 aa23.03■■□□□ 1.28
LCLAT1-208ENST00000476535 C7orf43Q8WVR3 580 aa23.03■■□□□ 1.28
LCLAT1-208ENST00000476535 TAOK3Q9H2K8 898 aa23.03■■□□□ 1.28
LCLAT1-208ENST00000476535 ZNF219Q9P2Y4 722 aaPredicted RBP23.03■■□□□ 1.28
LCLAT1-208ENST00000476535 CRY2Q49AN0 593 aa23.02■■□□□ 1.28
LCLAT1-208ENST00000476535 CFAP44Q96MT7 982 aa23.02■■□□□ 1.28
LCLAT1-208ENST00000476535 ANKRD36CQ5JPF3 1778 aa23.01■■□□□ 1.27
LCLAT1-208ENST00000476535 GLTPD2A6NH11 291 aa23.01■■□□□ 1.27
LCLAT1-208ENST00000476535 GPTP24298 496 aa23.01■■□□□ 1.27
LCLAT1-208ENST00000476535 RBM46Q8TBY0 533 aaKnown RBP23.01■■□□□ 1.27
LCLAT1-208ENST00000476535 LAS1LQ9Y4W2 734 aaKnown RBP23.01■■□□□ 1.27
LCLAT1-208ENST00000476535 KRT24Q2M2I5 525 aa23■■□□□ 1.27
LCLAT1-208ENST00000476535 PARP10Q53GL7 1025 aa23■■□□□ 1.27
LCLAT1-208ENST00000476535 SUSD4Q5VX71 490 aa23■■□□□ 1.27
LCLAT1-208ENST00000476535 NUTM1Q86Y26 1132 aa23■■□□□ 1.27
LCLAT1-208ENST00000476535 DDX21Q9NR30 783 aaKnown RBP eCLIP23■■□□□ 1.27
LCLAT1-208ENST00000476535 APAF1O14727 1248 aa22.99■■□□□ 1.27
LCLAT1-208ENST00000476535 ANXA1P04083 346 aa22.99■■□□□ 1.27
LCLAT1-208ENST00000476535 ALDH1B1P30837 517 aa22.99■■□□□ 1.27
LCLAT1-208ENST00000476535 ERFEQ4G0M1 354 aa22.99■■□□□ 1.27
LCLAT1-208ENST00000476535 CCDC93Q567U6 631 aa22.99■■□□□ 1.27
LCLAT1-208ENST00000476535 C16orf71Q8IYS4 520 aaPredicted RBP22.99■■□□□ 1.27
LCLAT1-208ENST00000476535 NTSR2O95665 410 aa22.98■■□□□ 1.27
LCLAT1-208ENST00000476535 ZNF853P0CG23 659 aa22.98■■□□□ 1.27
LCLAT1-208ENST00000476535 PPP1R42Q7Z4L9 355 aa22.98■■□□□ 1.27
LCLAT1-208ENST00000476535 RRAGCQ9HB90 399 aa22.98■■□□□ 1.27
LCLAT1-208ENST00000476535 CALD1Q05682 793 aaKnown RBP22.97■■□□□ 1.27
LCLAT1-208ENST00000476535 COPS6Q7L5N1 327 aa22.97■■□□□ 1.27
LCLAT1-208ENST00000476535 XAGE3Q8WTP9 111 aa22.97■■□□□ 1.27
LCLAT1-208ENST00000476535 NECTIN2Q92692 538 aa22.97■■□□□ 1.27
LCLAT1-208ENST00000476535 WDR90Q96KV7 1748 aa22.96■■□□□ 1.27
LCLAT1-208ENST00000476535 HSP90AB3PQ58FF7 597 aa22.96■■□□□ 1.27
LCLAT1-208ENST00000476535 HDGFL1Q5TGJ6 251 aa22.96■■□□□ 1.27
LCLAT1-208ENST00000476535 MBIPQ9NS73 344 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms