RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 USPL1Q5W0Q7 1092 aa19.52■□□□□ 0.72
SNX13-207ENST00000475800 DDX21Q9NR30 783 aaKnown RBP eCLIP19.52■□□□□ 0.72
SNX13-207ENST00000475800 FKBP8Q14318 412 aa19.51■□□□□ 0.71
SNX13-207ENST00000475800 ARHGAP27Q6ZUM4 889 aa19.51■□□□□ 0.71
SNX13-207ENST00000475800 C8orf58Q8NAV2 365 aa19.51■□□□□ 0.71
SNX13-207ENST00000475800 DBF4Q9UBU7 674 aaPredicted RBP19.51■□□□□ 0.71
SNX13-207ENST00000475800 TBC1D2BQ9UPU7 963 aa19.51■□□□□ 0.71
SNX13-207ENST00000475800 MYL6BP14649 208 aa19.5■□□□□ 0.71
SNX13-207ENST00000475800 PDIA6Q15084 440 aa19.5■□□□□ 0.71
SNX13-207ENST00000475800 TWISTNBQ3B726 338 aaPredicted RBP19.5■□□□□ 0.71
SNX13-207ENST00000475800 CCDC30Q5VVM6 783 aa19.5■□□□□ 0.71
SNX13-207ENST00000475800 CLEC4GQ6UXB4 293 aa19.5■□□□□ 0.71
SNX13-207ENST00000475800 ZNF652Q9Y2D9 606 aa19.5■□□□□ 0.71
SNX13-207ENST00000475800 ELL2O00472 640 aaPredicted RBP19.49■□□□□ 0.71
SNX13-207ENST00000475800 CAMTA2O94983 1202 aa19.49■□□□□ 0.71
SNX13-207ENST00000475800 KIF6Q6ZMV9 814 aa19.49■□□□□ 0.71
SNX13-207ENST00000475800 NECTIN2Q92692 538 aa19.49■□□□□ 0.71
SNX13-207ENST00000475800 SPINK5Q9NQ38 1064 aaPredicted RBP19.49■□□□□ 0.71
SNX13-207ENST00000475800 C10orf71Q711Q0 1435 aa19.49■□□□□ 0.71
SNX13-207ENST00000475800 ADCY9O60503 1353 aa19.48■□□□□ 0.71
SNX13-207ENST00000475800 ERVV-1B6SEH8 477 aa19.48■□□□□ 0.71
SNX13-207ENST00000475800 TGFB2P61812 414 aa19.48■□□□□ 0.71
SNX13-207ENST00000475800 HNRNPUQ00839 825 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNX13-207ENST00000475800 HYPKQ9NX55 129 aa19.48■□□□□ 0.71
SNX13-207ENST00000475800 CHPF2Q9P2E5 772 aa19.48■□□□□ 0.71
SNX13-207ENST00000475800 NUP98P52948 1817 aa19.48■□□□□ 0.71
SNX13-207ENST00000475800 KIAA1551Q9HCM1 1747 aa19.48■□□□□ 0.71
SNX13-207ENST00000475800 DDR1Q08345 913 aa19.47■□□□□ 0.71
SNX13-207ENST00000475800 SLFN5Q08AF3 891 aa19.47■□□□□ 0.71
SNX13-207ENST00000475800 LRP10Q7Z4F1 713 aa19.47■□□□□ 0.71
SNX13-207ENST00000475800 TSPYL6Q8N831 410 aa19.47■□□□□ 0.71
SNX13-207ENST00000475800 BCL2L12Q9HB09 334 aa19.47■□□□□ 0.71
SNX13-207ENST00000475800 MAP3K15Q6ZN16 1313 aa19.47■□□□□ 0.71
SNX13-207ENST00000475800 KIF13BQ9NQT8 1826 aa19.46■□□□□ 0.71
SNX13-207ENST00000475800 TM4SF1P30408 202 aa19.46■□□□□ 0.71
SNX13-207ENST00000475800 EXOSC9Q06265 439 aaKnown RBP19.46■□□□□ 0.71
SNX13-207ENST00000475800 STK31Q9BXU1 1019 aa19.46■□□□□ 0.71
SNX13-207ENST00000475800 CEP350Q5VT06 3117 aa19.46■□□□□ 0.71
SNX13-207ENST00000475800 PROSER3Q2NL68 480 aa19.45■□□□□ 0.7
SNX13-207ENST00000475800 ANXA1P04083 346 aa19.44■□□□□ 0.7
SNX13-207ENST00000475800 CHRNA5P30532 468 aa19.44■□□□□ 0.7
SNX13-207ENST00000475800 NFIXQ14938 502 aa19.44■□□□□ 0.7
SNX13-207ENST00000475800 AFDNP55196 1824 aaKnown RBP19.44■□□□□ 0.7
SNX13-207ENST00000475800 VAMP4O75379 141 aa19.43■□□□□ 0.7
SNX13-207ENST00000475800 TTLL7Q6ZT98 887 aa19.43■□□□□ 0.7
SNX13-207ENST00000475800 COPS6Q7L5N1 327 aa19.43■□□□□ 0.7
SNX13-207ENST00000475800 XAGE3Q8WTP9 111 aa19.43■□□□□ 0.7
SNX13-207ENST00000475800 CARMIL3Q8ND23 1372 aa19.43■□□□□ 0.7
SNX13-207ENST00000475800 NRXN2Q9P2S2 1712 aa19.42■□□□□ 0.7
SNX13-207ENST00000475800 POLRMTO00411 1230 aaKnown RBP19.42■□□□□ 0.7
SNX13-207ENST00000475800 KCNA3P22001 575 aa19.42■□□□□ 0.7
SNX13-207ENST00000475800 TBC1D9BQ66K14 1250 aa19.42■□□□□ 0.7
SNX13-207ENST00000475800 TRMT2AQ8IZ69 625 aaKnown RBP19.42■□□□□ 0.7
SNX13-207ENST00000475800 SETDB2Q96T68 719 aa19.42■□□□□ 0.7
SNX13-207ENST00000475800 ZBED9Q6R2W3 1325 aa19.42■□□□□ 0.7
SNX13-207ENST00000475800 AIMP1Q12904 312 aaKnown RBP19.41■□□□□ 0.7
SNX13-207ENST00000475800 GIGYF2Q6Y7W6 1299 aaKnown RBP19.41■□□□□ 0.7
SNX13-207ENST00000475800 PIM2Q9P1W9 311 aa19.41■□□□□ 0.7
SNX13-207ENST00000475800 ANKRD36CQ5JPF3 1778 aa19.4■□□□□ 0.7
SNX13-207ENST00000475800 HSP90AB3PQ58FF7 597 aa19.4■□□□□ 0.7
SNX13-207ENST00000475800 DALRD3Q5D0E6 543 aaKnown RBP19.4■□□□□ 0.7
SNX13-207ENST00000475800 BICDL1Q6ZP65 573 aa19.4■□□□□ 0.7
SNX13-207ENST00000475800 PLBD2Q8NHP8 589 aa19.4■□□□□ 0.7
SNX13-207ENST00000475800 ZNF428Q96B54 188 aa19.4■□□□□ 0.7
SNX13-207ENST00000475800 CDCA7LQ96GN5 454 aa19.4■□□□□ 0.7
SNX13-207ENST00000475800 ZBTB3Q9H5J0 574 aa19.4■□□□□ 0.7
SNX13-207ENST00000475800 KIF3CO14782 793 aa19.39■□□□□ 0.69
SNX13-207ENST00000475800 DDX58O95786 925 aaKnown RBP19.39■□□□□ 0.69
SNX13-207ENST00000475800 SERPINB2P05120 415 aa19.39■□□□□ 0.69
SNX13-207ENST00000475800 CT47B1P0C2W7 299 aaPredicted RBP19.39■□□□□ 0.69
SNX13-207ENST00000475800 HLFQ16534 295 aa19.39■□□□□ 0.69
SNX13-207ENST00000475800 C9orf131Q5VYM1 1079 aa19.39■□□□□ 0.69
SNX13-207ENST00000475800 ANKRD13DQ6ZTN6 518 aa19.39■□□□□ 0.69
SNX13-207ENST00000475800 NIP7Q9Y221 180 aaKnown RBP eCLIP19.39■□□□□ 0.69
SNX13-207ENST00000475800 BRCA1P38398 1863 aaKnown RBP19.38■□□□□ 0.69
SNX13-207ENST00000475800 NMRK2Q9NPI5 230 aa19.38■□□□□ 0.69
SNX13-207ENST00000475800 ARFGEF2Q9Y6D5 1785 aa19.37■□□□□ 0.69
SNX13-207ENST00000475800 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
SNX13-207ENST00000475800 HSPA6P17066 643 aa19.37■□□□□ 0.69
SNX13-207ENST00000475800 PARP10Q53GL7 1025 aa19.36■□□□□ 0.69
SNX13-207ENST00000475800 PHAXQ9H814 394 aaKnown RBP19.36■□□□□ 0.69
SNX13-207ENST00000475800 IBTKQ9P2D0 1353 aaPredicted RBP19.35■□□□□ 0.69
SNX13-207ENST00000475800 NPHP1O15259 732 aa19.35■□□□□ 0.69
SNX13-207ENST00000475800 TPTE2Q6XPS3 522 aa19.35■□□□□ 0.69
SNX13-207ENST00000475800 RIC3Q7Z5B4 369 aa19.35■□□□□ 0.69
SNX13-207ENST00000475800 NBPF5PQ86XG9 351 aaPredicted RBP19.35■□□□□ 0.69
SNX13-207ENST00000475800 ZNF34Q8IZ26 560 aa19.35■□□□□ 0.69
SNX13-207ENST00000475800 CNBD1Q8NA66 436 aa19.35■□□□□ 0.69
SNX13-207ENST00000475800 NYXQ9GZU5 481 aa19.35■□□□□ 0.69
SNX13-207ENST00000475800 RNF181Q9P0P0 153 aa19.35■□□□□ 0.69
SNX13-207ENST00000475800 ST5P78524 1137 aa19.34■□□□□ 0.69
SNX13-207ENST00000475800 TCIRG1Q13488 830 aa19.34■□□□□ 0.69
SNX13-207ENST00000475800 CCDC24Q8N4L8 307 aa19.34■□□□□ 0.69
SNX13-207ENST00000475800 TCERG1O14776 1098 aaKnown RBP19.33■□□□□ 0.68
SNX13-207ENST00000475800 FLIIQ13045 1269 aa19.33■□□□□ 0.68
SNX13-207ENST00000475800 PPP1R42Q7Z4L9 355 aa19.33■□□□□ 0.68
SNX13-207ENST00000475800 PDZRN3Q9UPQ7 1066 aa19.33■□□□□ 0.68
SNX13-207ENST00000475800 ARFGEF1Q9Y6D6 1849 aa19.32■□□□□ 0.68
SNX13-207ENST00000475800 RNF123Q5XPI4 1314 aa19.32■□□□□ 0.68
SNX13-207ENST00000475800 GPTP24298 496 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms