RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 XAGE3Q8WTP9 111 aa13.53□□□□□ -0.24
COPS6-208ENST00000474823 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
COPS6-208ENST00000474823 RGL2O15211 777 aa13.52□□□□□ -0.25
COPS6-208ENST00000474823 VAMP4O75379 141 aa13.52□□□□□ -0.25
COPS6-208ENST00000474823 TTLL7Q6ZT98 887 aa13.52□□□□□ -0.25
COPS6-208ENST00000474823 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
COPS6-208ENST00000474823 ZBTB3Q9H5J0 574 aa13.52□□□□□ -0.25
COPS6-208ENST00000474823 ZBED9Q6R2W3 1325 aa13.52□□□□□ -0.25
COPS6-208ENST00000474823 MAP3K15Q6ZN16 1313 aa13.52□□□□□ -0.25
COPS6-208ENST00000474823 NFIXQ14938 502 aa13.51□□□□□ -0.25
COPS6-208ENST00000474823 LRP10Q7Z4F1 713 aa13.51□□□□□ -0.25
COPS6-208ENST00000474823 SETDB2Q96T68 719 aa13.51□□□□□ -0.25
COPS6-208ENST00000474823 COL24A1Q17RW2 1714 aa13.5□□□□□ -0.25
COPS6-208ENST00000474823 SCN7AQ01118 1682 aa13.5□□□□□ -0.25
COPS6-208ENST00000474823 TCERG1O14776 1098 aaKnown RBP13.5□□□□□ -0.25
COPS6-208ENST00000474823 NPHP1O15259 732 aa13.5□□□□□ -0.25
COPS6-208ENST00000474823 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
COPS6-208ENST00000474823 TM4SF1P30408 202 aa13.5□□□□□ -0.25
COPS6-208ENST00000474823 HLFQ16534 295 aa13.5□□□□□ -0.25
COPS6-208ENST00000474823 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
COPS6-208ENST00000474823 TRMT2AQ8IZ69 625 aaKnown RBP13.5□□□□□ -0.25
COPS6-208ENST00000474823 CARMIL3Q8ND23 1372 aa13.49□□□□□ -0.25
COPS6-208ENST00000474823 POLRMTO00411 1230 aaKnown RBP13.49□□□□□ -0.25
COPS6-208ENST00000474823 DDX58O95786 925 aaKnown RBP13.49□□□□□ -0.25
COPS6-208ENST00000474823 HSP90AB3PQ58FF7 597 aa13.49□□□□□ -0.25
COPS6-208ENST00000474823 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
COPS6-208ENST00000474823 ANKRD13DQ6ZTN6 518 aa13.49□□□□□ -0.25
COPS6-208ENST00000474823 PLBD2Q8NHP8 589 aa13.49□□□□□ -0.25
COPS6-208ENST00000474823 PHAXQ9H814 394 aaKnown RBP13.49□□□□□ -0.25
COPS6-208ENST00000474823 NIP7Q9Y221 180 aaKnown RBP eCLIP13.49□□□□□ -0.25
COPS6-208ENST00000474823 BCORQ6W2J9 1755 aa13.48□□□□□ -0.25
COPS6-208ENST00000474823 SERPINB2P05120 415 aa13.48□□□□□ -0.25
COPS6-208ENST00000474823 CT47B1P0C2W7 299 aaPredicted RBP13.48□□□□□ -0.25
COPS6-208ENST00000474823 DDR1Q08345 913 aa13.48□□□□□ -0.25
COPS6-208ENST00000474823 RIC3Q7Z5B4 369 aa13.48□□□□□ -0.25
COPS6-208ENST00000474823 FHDC1Q9C0D6 1143 aaPredicted RBP13.48□□□□□ -0.25
COPS6-208ENST00000474823 CD2APQ9Y5K6 639 aa13.48□□□□□ -0.25
COPS6-208ENST00000474823 ZNF428Q96B54 188 aa13.47□□□□□ -0.25
COPS6-208ENST00000474823 SYT17Q9BSW7 474 aa13.47□□□□□ -0.25
COPS6-208ENST00000474823 GPTP24298 496 aa13.46□□□□□ -0.25
COPS6-208ENST00000474823 NBPF5PQ86XG9 351 aaPredicted RBP13.46□□□□□ -0.25
COPS6-208ENST00000474823 CNBD1Q8NA66 436 aa13.46□□□□□ -0.25
COPS6-208ENST00000474823 ATP10DQ9P241 1426 aa13.46□□□□□ -0.26
COPS6-208ENST00000474823 FAM177BA6PVY3 158 aa13.45□□□□□ -0.26
COPS6-208ENST00000474823 GTF2E1P29083 439 aaPredicted RBP13.45□□□□□ -0.26
COPS6-208ENST00000474823 ST5P78524 1137 aa13.45□□□□□ -0.26
COPS6-208ENST00000474823 FLIIQ13045 1269 aa13.45□□□□□ -0.26
COPS6-208ENST00000474823 FKBP5Q13451 457 aaPredicted RBP13.45□□□□□ -0.26
COPS6-208ENST00000474823 TCIRG1Q13488 830 aa13.45□□□□□ -0.26
COPS6-208ENST00000474823 PARP10Q53GL7 1025 aa13.45□□□□□ -0.26
COPS6-208ENST00000474823 TPTE2Q6XPS3 522 aa13.45□□□□□ -0.26
COPS6-208ENST00000474823 NYXQ9GZU5 481 aa13.45□□□□□ -0.26
COPS6-208ENST00000474823 SRCAPQ6ZRS2 3230 aa13.45□□□□□ -0.26
COPS6-208ENST00000474823 KSR2Q6VAB6 950 aa13.44□□□□□ -0.26
COPS6-208ENST00000474823 G2E3Q7L622 706 aa13.44□□□□□ -0.26
COPS6-208ENST00000474823 PPP1R42Q7Z4L9 355 aa13.44□□□□□ -0.26
COPS6-208ENST00000474823 ZNF34Q8IZ26 560 aa13.44□□□□□ -0.26
COPS6-208ENST00000474823 NUP98P52948 1817 aa13.43□□□□□ -0.26
COPS6-208ENST00000474823 CACNA1FO60840 1977 aa13.43□□□□□ -0.26
COPS6-208ENST00000474823 PI4KAP2A4QPH2 592 aa13.43□□□□□ -0.26
COPS6-208ENST00000474823 TGFB2P61812 414 aa13.43□□□□□ -0.26
COPS6-208ENST00000474823 NEXNQ0ZGT2 675 aa13.43□□□□□ -0.26
COPS6-208ENST00000474823 ALDH1L2Q3SY69 923 aa13.43□□□□□ -0.26
COPS6-208ENST00000474823 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
COPS6-208ENST00000474823 C10orf71Q711Q0 1435 aa13.43□□□□□ -0.26
COPS6-208ENST00000474823 PI4KAP1Q8N8J0 262 aa13.43□□□□□ -0.26
COPS6-208ENST00000474823 YTHDC1Q96MU7 727 aaKnown RBP13.43□□□□□ -0.26
COPS6-208ENST00000474823 SMC4Q9NTJ3 1288 aa13.43□□□□□ -0.26
COPS6-208ENST00000474823 MAP3K2Q9Y2U5 619 aa13.43□□□□□ -0.26
COPS6-208ENST00000474823 DCAF8L1A6NGE4 600 aa13.42□□□□□ -0.26
COPS6-208ENST00000474823 SSH1Q8WYL5 1049 aa13.42□□□□□ -0.26
COPS6-208ENST00000474823 MYD88Q99836 296 aa13.42□□□□□ -0.26
COPS6-208ENST00000474823 METTL22Q9BUU2 404 aaPredicted RBP13.42□□□□□ -0.26
COPS6-208ENST00000474823 UTP14AQ9BVJ6 771 aaKnown RBP13.42□□□□□ -0.26
COPS6-208ENST00000474823 UBN2Q6ZU65 1347 aa13.41□□□□□ -0.26
COPS6-208ENST00000474823 ATP5J2-PTCD1G3V325 749 aa13.41□□□□□ -0.26
COPS6-208ENST00000474823 PDE6BP35913 854 aa13.41□□□□□ -0.26
COPS6-208ENST00000474823 SUSD4Q5VX71 490 aa13.41□□□□□ -0.26
COPS6-208ENST00000474823 NLRP10Q86W26 655 aa13.41□□□□□ -0.26
COPS6-208ENST00000474823 CCDC24Q8N4L8 307 aa13.41□□□□□ -0.26
COPS6-208ENST00000474823 MRPL50Q8N5N7 158 aaKnown RBP13.41□□□□□ -0.26
COPS6-208ENST00000474823 NLGN2Q8NFZ4 835 aa13.41□□□□□ -0.26
COPS6-208ENST00000474823 BRIP1Q9BX63 1249 aa13.41□□□□□ -0.26
COPS6-208ENST00000474823 BCL2L13Q9BXK5 485 aa13.41□□□□□ -0.26
COPS6-208ENST00000474823 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
COPS6-208ENST00000474823 AFDNP55196 1824 aaKnown RBP13.41□□□□□ -0.26
COPS6-208ENST00000474823 NRXN2Q9P2S2 1712 aa13.4□□□□□ -0.26
COPS6-208ENST00000474823 DNAAF4Q8WXU2 420 aa13.4□□□□□ -0.26
COPS6-208ENST00000474823 ISCA1Q9BUE6 129 aa13.4□□□□□ -0.26
COPS6-208ENST00000474823 TRMT112Q9UI30 125 aaKnown RBP13.4□□□□□ -0.26
COPS6-208ENST00000474823 ADCY9O60503 1353 aa13.4□□□□□ -0.26
COPS6-208ENST00000474823 RNF123Q5XPI4 1314 aa13.39□□□□□ -0.27
COPS6-208ENST00000474823 A0A0G2JLW4 131 aa13.39□□□□□ -0.27
COPS6-208ENST00000474823 H0YIN7 160 aa13.39□□□□□ -0.27
COPS6-208ENST00000474823 NTSR2O95665 410 aa13.39□□□□□ -0.27
COPS6-208ENST00000474823 RARSP54136 660 aaKnown RBP13.39□□□□□ -0.27
COPS6-208ENST00000474823 TRIM28Q13263 835 aaKnown RBP13.39□□□□□ -0.27
COPS6-208ENST00000474823 NUTM1Q86Y26 1132 aa13.39□□□□□ -0.27
COPS6-208ENST00000474823 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
COPS6-208ENST00000474823 CCDC191Q8NCU4 936 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms