RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 TTC22Q5TAA0 569 aa7.72□□□□□ -1.17
CLK1-210ENST00000473565 NUTM1Q86Y26 1132 aa7.72□□□□□ -1.17
CLK1-210ENST00000473565 KLHDC4Q8TBB5 520 aa7.72□□□□□ -1.17
CLK1-210ENST00000473565 NGLY1Q96IV0 654 aa7.72□□□□□ -1.17
CLK1-210ENST00000473565 LRRCC1Q9C099 1032 aa7.72□□□□□ -1.17
CLK1-210ENST00000473565 WNK3Q9BYP7 1800 aa7.72□□□□□ -1.17
CLK1-210ENST00000473565 IBTKQ9P2D0 1353 aaPredicted RBP7.72□□□□□ -1.17
CLK1-210ENST00000473565 NEXNQ0ZGT2 675 aa7.71□□□□□ -1.17
CLK1-210ENST00000473565 POLA2Q14181 598 aa7.71□□□□□ -1.17
CLK1-210ENST00000473565 GCKRQ14397 625 aa7.71□□□□□ -1.17
CLK1-210ENST00000473565 FAM98CQ17RN3 349 aaKnown RBP7.71□□□□□ -1.17
CLK1-210ENST00000473565 TBC1D9Q6ZT07 1266 aa7.71□□□□□ -1.17
CLK1-210ENST00000473565 MARCH10Q8NA82 808 aaPredicted RBP7.71□□□□□ -1.17
CLK1-210ENST00000473565 ARFGEF2Q9Y6D5 1785 aa7.71□□□□□ -1.17
CLK1-210ENST00000473565 AFDNP55196 1824 aaKnown RBP7.71□□□□□ -1.17
CLK1-210ENST00000473565 UBE3BQ7Z3V4 1068 aa7.71□□□□□ -1.18
CLK1-210ENST00000473565 DOT1LQ8TEK3 1739 aa7.71□□□□□ -1.18
CLK1-210ENST00000473565 SPATA31A5Q5VU36 1347 aa7.71□□□□□ -1.18
CLK1-210ENST00000473565 SPATA31A7Q8IWB4 1347 aa7.71□□□□□ -1.18
CLK1-210ENST00000473565 SDSP20132 328 aa7.71□□□□□ -1.18
CLK1-210ENST00000473565 MYT1Q01538 1121 aa7.71□□□□□ -1.18
CLK1-210ENST00000473565 AEBP2Q6ZN18 517 aaPredicted RBP7.71□□□□□ -1.18
CLK1-210ENST00000473565 TBC1D32Q96NH3 1257 aa7.71□□□□□ -1.18
CLK1-210ENST00000473565 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.71□□□□□ -1.18
CLK1-210ENST00000473565 EP400Q96L91 3159 aa7.7□□□□□ -1.18
CLK1-210ENST00000473565 SLIT2O94813 1529 aa7.7□□□□□ -1.18
CLK1-210ENST00000473565 PDE1AP54750 535 aa7.7□□□□□ -1.18
CLK1-210ENST00000473565 OS9Q13438 667 aaPredicted RBP7.7□□□□□ -1.18
CLK1-210ENST00000473565 SIL1Q9H173 461 aa7.7□□□□□ -1.18
CLK1-210ENST00000473565 BCL9O00512 1426 aa7.7□□□□□ -1.18
CLK1-210ENST00000473565 FAM182BQ5T319 152 aa7.7□□□□□ -1.18
CLK1-210ENST00000473565 C22orf23Q9BZE7 217 aa7.7□□□□□ -1.18
CLK1-210ENST00000473565 UPF2Q9HAU5 1272 aaKnown RBP7.7□□□□□ -1.18
CLK1-210ENST00000473565 A0A087WZG4 1122 aa7.69□□□□□ -1.18
CLK1-210ENST00000473565 KCNQ2O43526 872 aa7.69□□□□□ -1.18
CLK1-210ENST00000473565 MAP4K4O95819 1239 aaPredicted RBP7.69□□□□□ -1.18
CLK1-210ENST00000473565 PLBD2Q8NHP8 589 aa7.69□□□□□ -1.18
CLK1-210ENST00000473565 RHPN1Q8TCX5 695 aa7.69□□□□□ -1.18
CLK1-210ENST00000473565 SALL3Q9BXA9 1300 aa7.69□□□□□ -1.18
CLK1-210ENST00000473565 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.69□□□□□ -1.18
CLK1-210ENST00000473565 LRP6O75581 1613 aa7.69□□□□□ -1.18
CLK1-210ENST00000473565 MX1P20591 662 aa7.69□□□□□ -1.18
CLK1-210ENST00000473565 CDC45O75419 566 aa7.69□□□□□ -1.18
CLK1-210ENST00000473565 PTF1AQ7RTS3 328 aa7.69□□□□□ -1.18
CLK1-210ENST00000473565 UNC5CLQ8IV45 518 aa7.69□□□□□ -1.18
CLK1-210ENST00000473565 ZBTB1Q9Y2K1 713 aa7.69□□□□□ -1.18
CLK1-210ENST00000473565 JCADQ9P266 1359 aa7.68□□□□□ -1.18
CLK1-210ENST00000473565 BCL9LQ86UU0 1499 aa7.68□□□□□ -1.18
CLK1-210ENST00000473565 HSPA1LP34931 641 aa7.68□□□□□ -1.18
CLK1-210ENST00000473565 KCNQ4P56696 695 aa7.68□□□□□ -1.18
CLK1-210ENST00000473565 CERKQ8TCT0 537 aa7.68□□□□□ -1.18
CLK1-210ENST00000473565 DDRGK1Q96HY6 314 aa7.68□□□□□ -1.18
CLK1-210ENST00000473565 UTYO14607 1347 aa7.68□□□□□ -1.18
CLK1-210ENST00000473565 MTX1Q13505 466 aa7.68□□□□□ -1.18
CLK1-210ENST00000473565 CHMP3Q9Y3E7 222 aa7.68□□□□□ -1.18
CLK1-210ENST00000473565 NUP188Q5SRE5 1749 aa7.68□□□□□ -1.18
CLK1-210ENST00000473565 TRIM6-TRIM34B2RNG4 842 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 RILPL2Q969X0 211 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 NWD2Q9ULI1 1742 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 ERBB4Q15303 1308 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 CYP19A1P11511 503 aaPredicted RBP7.67□□□□□ -1.18
CLK1-210ENST00000473565 GPTP24298 496 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 HLFQ16534 295 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 SYNE4Q8N205 404 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 SPRYD3Q8NCJ5 442 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 KIF1BPQ96EK5 621 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 CCDC85AQ96PX6 553 aaPredicted RBP7.67□□□□□ -1.18
CLK1-210ENST00000473565 THRAP3Q9Y2W1 955 aaKnown RBP7.67□□□□□ -1.18
CLK1-210ENST00000473565 SASH1O94885 1247 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 STARD3NLO95772 234 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 NBR1Q14596 966 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 DAXXQ9UER7 740 aaPredicted RBP7.67□□□□□ -1.18
CLK1-210ENST00000473565 USP21Q9UK80 565 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 TBC1D2BQ9UPU7 963 aa7.67□□□□□ -1.18
CLK1-210ENST00000473565 RAB11FIP3O75154 756 aa7.66□□□□□ -1.18
CLK1-210ENST00000473565 CASP7P55210 303 aa7.66□□□□□ -1.18
CLK1-210ENST00000473565 ANP32EQ9BTT0 268 aa7.66□□□□□ -1.18
CLK1-210ENST00000473565 CDCA7Q9BWT1 371 aaPredicted RBP7.66□□□□□ -1.18
CLK1-210ENST00000473565 OSBPL3Q9H4L5 887 aa7.66□□□□□ -1.18
CLK1-210ENST00000473565 CWC25Q9NXE8 425 aaPredicted RBP7.66□□□□□ -1.18
CLK1-210ENST00000473565 TJP1Q07157 1748 aa7.66□□□□□ -1.18
CLK1-210ENST00000473565 LMBR1LQ6UX01 489 aa7.66□□□□□ -1.18
CLK1-210ENST00000473565 BARGINQ6ZT62 677 aa7.66□□□□□ -1.18
CLK1-210ENST00000473565 SMIM5Q71RC9 77 aa7.66□□□□□ -1.18
CLK1-210ENST00000473565 VSIG10Q8N0Z9 540 aa7.66□□□□□ -1.18
CLK1-210ENST00000473565 CCDC8Q9H0W5 538 aaPredicted RBP7.66□□□□□ -1.18
CLK1-210ENST00000473565 TLR7Q9NYK1 1049 aaKnown RBP7.66□□□□□ -1.18
CLK1-210ENST00000473565 ATP6V1AP38606 617 aa7.65□□□□□ -1.18
CLK1-210ENST00000473565 ITPK1Q13572 414 aa7.65□□□□□ -1.18
CLK1-210ENST00000473565 MEX3CQ5U5Q3 659 aaKnown RBP7.65□□□□□ -1.18
CLK1-210ENST00000473565 AACSQ86V21 672 aa7.65□□□□□ -1.18
CLK1-210ENST00000473565 TUBGCP6Q96RT7 1819 aa7.65□□□□□ -1.18
CLK1-210ENST00000473565 G3BP1Q13283 466 aaKnown RBP eCLIP7.65□□□□□ -1.18
CLK1-210ENST00000473565 VPS72Q15906 364 aa7.65□□□□□ -1.18
CLK1-210ENST00000473565 KIF6Q6ZMV9 814 aa7.65□□□□□ -1.18
CLK1-210ENST00000473565 PI4K2BQ8TCG2 481 aa7.65□□□□□ -1.18
CLK1-210ENST00000473565 EAF2Q96CJ1 260 aaPredicted RBP7.65□□□□□ -1.18
CLK1-210ENST00000473565 FAM89AQ96GI7 184 aa7.65□□□□□ -1.18
CLK1-210ENST00000473565 ZNF594Q96JF6 807 aaPredicted RBP7.65□□□□□ -1.18
CLK1-210ENST00000473565 TBC1D2Q9BYX2 928 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms