RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 SMC5Q8IY18 1101 aa34.46■■■■□ 3.11
HOXB3-207ENST00000472863 LRRFIP2Q9Y608 721 aaKnown RBP34.46■■■■□ 3.11
HOXB3-207ENST00000472863 BRWD3Q6RI45 1802 aa34.45■■■■□ 3.11
HOXB3-207ENST00000472863 NHSQ6T4R5 1651 aa34.45■■■■□ 3.11
HOXB3-207ENST00000472863 ZBTB3Q9H5J0 574 aa34.45■■■■□ 3.11
HOXB3-207ENST00000472863 PDZRN3Q9UPQ7 1066 aa34.44■■■■□ 3.1
HOXB3-207ENST00000472863 BTAF1O14981 1849 aa34.44■■■■□ 3.1
HOXB3-207ENST00000472863 SBF2Q86WG5 1849 aa34.44■■■■□ 3.1
HOXB3-207ENST00000472863 ARFGEF2Q9Y6D5 1785 aa34.44■■■■□ 3.1
HOXB3-207ENST00000472863 NEURL1BA8MQ27 555 aa34.43■■■■□ 3.1
HOXB3-207ENST00000472863 C9orf78Q9NZ63 289 aaPredicted RBP34.43■■■■□ 3.1
HOXB3-207ENST00000472863 KCNQ4P56696 695 aa34.42■■■■□ 3.1
HOXB3-207ENST00000472863 INTS5Q6P9B9 1019 aaKnown RBP34.42■■■■□ 3.1
HOXB3-207ENST00000472863 ATP5J2-PTCD1G3V325 749 aa34.42■■■■□ 3.1
HOXB3-207ENST00000472863 CRKLP46109 303 aaKnown RBP34.41■■■■□ 3.1
HOXB3-207ENST00000472863 ARXQ96QS3 562 aa34.4■■■■□ 3.1
HOXB3-207ENST00000472863 RGS17Q9UGC6 210 aaPredicted RBP34.4■■■■□ 3.1
HOXB3-207ENST00000472863 RGS3P49796 1198 aa34.39■■■■□ 3.1
HOXB3-207ENST00000472863 GCKRQ14397 625 aa34.39■■■■□ 3.1
HOXB3-207ENST00000472863 CCDC87Q9NVE4 849 aa34.39■■■■□ 3.1
HOXB3-207ENST00000472863 GRM8O00222 908 aa34.38■■■■□ 3.09
HOXB3-207ENST00000472863 FAM196AQ6ZSG2 479 aa34.38■■■■□ 3.09
HOXB3-207ENST00000472863 EP400Q96L91 3159 aa34.38■■■■□ 3.09
HOXB3-207ENST00000472863 NUP188Q5SRE5 1749 aa34.37■■■■□ 3.09
HOXB3-207ENST00000472863 RXRBP28702 533 aa34.37■■■■□ 3.09
HOXB3-207ENST00000472863 IL6STP40189 918 aaPredicted RBP34.37■■■■□ 3.09
HOXB3-207ENST00000472863 ATP8B2P98198 1209 aa34.37■■■■□ 3.09
HOXB3-207ENST00000472863 GCC1Q96CN9 775 aa34.37■■■■□ 3.09
HOXB3-207ENST00000472863 BCL11BQ9C0K0 894 aaPredicted RBP34.36■■■■□ 3.09
HOXB3-207ENST00000472863 PNMA6EA0A0J9YXQ4 647 aa34.36■■■■□ 3.09
HOXB3-207ENST00000472863 KIF6Q6ZMV9 814 aa34.36■■■■□ 3.09
HOXB3-207ENST00000472863 DCTPP1Q9H773 170 aa34.36■■■■□ 3.09
HOXB3-207ENST00000472863 UTYO14607 1347 aa34.35■■■■□ 3.09
HOXB3-207ENST00000472863 CICQ96RK0 1608 aaPredicted RBP34.35■■■■□ 3.09
HOXB3-207ENST00000472863 LINC00116Q8NCU8 138 aa34.35■■■■□ 3.09
HOXB3-207ENST00000472863 MYH14Q7Z406 1995 aaKnown RBP34.35■■■■□ 3.09
HOXB3-207ENST00000472863 EIF5P55010 431 aaKnown RBP34.34■■■■□ 3.09
HOXB3-207ENST00000472863 MAP3K15Q6ZN16 1313 aa34.33■■■■□ 3.09
HOXB3-207ENST00000472863 HMMRO75330 724 aa34.32■■■■□ 3.08
HOXB3-207ENST00000472863 NUCB1Q02818 461 aa34.32■■■■□ 3.08
HOXB3-207ENST00000472863 JARID2Q92833 1246 aaPredicted RBP34.32■■■■□ 3.08
HOXB3-207ENST00000472863 IBTKQ9P2D0 1353 aaPredicted RBP34.32■■■■□ 3.08
HOXB3-207ENST00000472863 ZNF831Q5JPB2 1677 aa34.32■■■■□ 3.08
HOXB3-207ENST00000472863 AFDNP55196 1824 aaKnown RBP34.32■■■■□ 3.08
HOXB3-207ENST00000472863 TBC1D2BQ9UPU7 963 aa34.32■■■■□ 3.08
HOXB3-207ENST00000472863 HLFQ16534 295 aa34.3■■■■□ 3.08
HOXB3-207ENST00000472863 ANKRD45Q5TZF3 282 aa34.3■■■■□ 3.08
HOXB3-207ENST00000472863 POTEAQ6S8J7 498 aa34.3■■■■□ 3.08
HOXB3-207ENST00000472863 NPM2Q86SE8 214 aaKnown RBP34.3■■■■□ 3.08
HOXB3-207ENST00000472863 KAZALD1Q96I82 304 aa34.3■■■■□ 3.08
HOXB3-207ENST00000472863 SUCLG2Q96I99 432 aa34.3■■■■□ 3.08
HOXB3-207ENST00000472863 COL5A3P25940 1745 aaPredicted RBP34.3■■■■□ 3.08
HOXB3-207ENST00000472863 TRIM37O94972 964 aa34.3■■■■□ 3.08
HOXB3-207ENST00000472863 TCIRG1Q13488 830 aa34.3■■■■□ 3.08
HOXB3-207ENST00000472863 PPP1R42Q7Z4L9 355 aa34.3■■■■□ 3.08
HOXB3-207ENST00000472863 DZIP3Q86Y13 1208 aaKnown RBP34.3■■■■□ 3.08
HOXB3-207ENST00000472863 CCNL1Q9UK58 526 aaPredicted RBP34.29■■■■□ 3.08
HOXB3-207ENST00000472863 A0A087WZG4 1122 aa34.28■■■■□ 3.08
HOXB3-207ENST00000472863 CHD1LQ86WJ1 897 aa34.28■■■■□ 3.08
HOXB3-207ENST00000472863 LNPKQ9C0E8 428 aa34.28■■■■□ 3.08
HOXB3-207ENST00000472863 RREB1Q92766 1687 aa34.27■■■■□ 3.08
HOXB3-207ENST00000472863 GIGYF2Q6Y7W6 1299 aaKnown RBP34.27■■■■□ 3.08
HOXB3-207ENST00000472863 ISCA1Q9BUE6 129 aa34.27■■■■□ 3.08
HOXB3-207ENST00000472863 PDE4AP27815 886 aa34.26■■■■□ 3.08
HOXB3-207ENST00000472863 CWC25Q9NXE8 425 aaPredicted RBP34.26■■■■□ 3.08
HOXB3-207ENST00000472863 HDAC5Q9UQL6 1122 aa34.26■■■■□ 3.08
HOXB3-207ENST00000472863 UBE3BQ7Z3V4 1068 aa34.26■■■■□ 3.07
HOXB3-207ENST00000472863 SSH3Q8TE77 659 aa34.26■■■■□ 3.07
HOXB3-207ENST00000472863 SRGAP3O43295 1099 aa34.25■■■■□ 3.07
HOXB3-207ENST00000472863 CCDC191Q8NCU4 936 aa34.25■■■■□ 3.07
HOXB3-207ENST00000472863 BICC1Q9H694 974 aaKnown RBP34.24■■■■□ 3.07
HOXB3-207ENST00000472863 POLA2Q14181 598 aa34.24■■■■□ 3.07
HOXB3-207ENST00000472863 LY75O60449 1722 aa34.23■■■■□ 3.07
HOXB3-207ENST00000472863 TSHZ2Q9NRE2 1034 aa34.23■■■■□ 3.07
HOXB3-207ENST00000472863 ERVV-1B6SEH8 477 aa34.22■■■■□ 3.07
HOXB3-207ENST00000472863 H7C1W4 665 aa34.22■■■■□ 3.07
HOXB3-207ENST00000472863 APBB1O00213 710 aa34.22■■■■□ 3.07
HOXB3-207ENST00000472863 CASP7P55210 303 aa34.22■■■■□ 3.07
HOXB3-207ENST00000472863 EXOC6BQ9Y2D4 811 aa34.22■■■■□ 3.07
HOXB3-207ENST00000472863 CNTNAP4Q9C0A0 1308 aa34.22■■■■□ 3.07
HOXB3-207ENST00000472863 MTX1Q13505 466 aa34.22■■■■□ 3.07
HOXB3-207ENST00000472863 RTL5Q5HYW3 569 aaPredicted RBP34.22■■■■□ 3.07
HOXB3-207ENST00000472863 EPHA10Q5JZY3 1008 aa34.22■■■■□ 3.07
HOXB3-207ENST00000472863 TRIM28Q13263 835 aaKnown RBP34.21■■■■□ 3.07
HOXB3-207ENST00000472863 GPTP24298 496 aa34.2■■■■□ 3.06
HOXB3-207ENST00000472863 SMIM5Q71RC9 77 aa34.19■■■■□ 3.06
HOXB3-207ENST00000472863 RC3H1Q5TC82 1133 aaKnown RBP34.18■■■■□ 3.06
HOXB3-207ENST00000472863 LRRC4BQ9NT99 713 aa34.18■■■■□ 3.06
HOXB3-207ENST00000472863 COL15A1P39059 1388 aa34.18■■■■□ 3.06
HOXB3-207ENST00000472863 NUP98P52948 1817 aa34.18■■■■□ 3.06
HOXB3-207ENST00000472863 BCL11AQ9H165 835 aa34.18■■■■□ 3.06
HOXB3-207ENST00000472863 SMARCA5O60264 1052 aaPredicted RBP34.17■■■■□ 3.06
HOXB3-207ENST00000472863 CAMTA2O94983 1202 aa34.17■■■■□ 3.06
HOXB3-207ENST00000472863 HSP90AB3PQ58FF7 597 aa34.17■■■■□ 3.06
HOXB3-207ENST00000472863 SURF6O75683 361 aaKnown RBP34.14■■■■□ 3.06
HOXB3-207ENST00000472863 NLRP10Q86W26 655 aa34.14■■■■□ 3.06
HOXB3-207ENST00000472863 TAF1LQ8IZX4 1826 aa34.14■■■■□ 3.06
HOXB3-207ENST00000472863 RPS6KA4O75676 772 aa34.14■■■■□ 3.06
HOXB3-207ENST00000472863 GNPATO15228 680 aa34.13■■■■□ 3.05
HOXB3-207ENST00000472863 C16orf71Q8IYS4 520 aaPredicted RBP34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms