RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CFHP08603 1231 aa8.81□□□□□ -1
VAMP3-202ENST00000470357 TNNT2P45379 298 aaPredicted RBP8.81□□□□□ -1
VAMP3-202ENST00000470357 MTHFSP49914 203 aa8.81□□□□□ -1
VAMP3-202ENST00000470357 CCDC184Q52MB2 194 aa8.81□□□□□ -1
VAMP3-202ENST00000470357 FAM9BQ8IZU0 186 aa8.81□□□□□ -1
VAMP3-202ENST00000470357 ABTB2Q8N961 1025 aa8.81□□□□□ -1
VAMP3-202ENST00000470357 KCNH5Q8NCM2 988 aa8.81□□□□□ -1
VAMP3-202ENST00000470357 NUDCQ9Y266 331 aa8.81□□□□□ -1
VAMP3-202ENST00000470357 CRYBG1Q9Y4K1 1723 aa8.8□□□□□ -1
VAMP3-202ENST00000470357 SULF1Q8IWU6 871 aa8.8□□□□□ -1
VAMP3-202ENST00000470357 REPIN1Q9BWE0 567 aaKnown RBP8.8□□□□□ -1
VAMP3-202ENST00000470357 RREB1Q92766 1687 aa8.8□□□□□ -1
VAMP3-202ENST00000470357 PHRF1Q9P1Y6 1649 aaKnown RBP8.8□□□□□ -1
VAMP3-202ENST00000470357 LTN1O94822 1766 aa8.79□□□□□ -1
VAMP3-202ENST00000470357 KCNQ2O43526 872 aa8.79□□□□□ -1
VAMP3-202ENST00000470357 CLCN1P35523 988 aa8.79□□□□□ -1
VAMP3-202ENST00000470357 KMT5BQ4FZB7 885 aa8.79□□□□□ -1
VAMP3-202ENST00000470357 YTHDC1Q96MU7 727 aaKnown RBP8.79□□□□□ -1
VAMP3-202ENST00000470357 TMUB1Q9BVT8 246 aa8.79□□□□□ -1
VAMP3-202ENST00000470357 PNNQ9H307 717 aaKnown RBP8.79□□□□□ -1
VAMP3-202ENST00000470357 GPCPD1Q9NPB8 672 aa8.79□□□□□ -1
VAMP3-202ENST00000470357 NUP188Q5SRE5 1749 aa8.79□□□□□ -1
VAMP3-202ENST00000470357 KIAA0232Q92628 1395 aa8.78□□□□□ -1
VAMP3-202ENST00000470357 CHRNA2Q15822 529 aa8.78□□□□□ -1
VAMP3-202ENST00000470357 NGEFQ8N5V2 710 aa8.78□□□□□ -1
VAMP3-202ENST00000470357 SPON1Q9HCB6 807 aa8.78□□□□□ -1
VAMP3-202ENST00000470357 PRDM11Q9NQV5 511 aa8.78□□□□□ -1
VAMP3-202ENST00000470357 POLKQ9UBT6 870 aa8.78□□□□□ -1
VAMP3-202ENST00000470357 SLIT3O75094 1523 aa8.78□□□□□ -1
VAMP3-202ENST00000470357 RTL1A6NKG5 1358 aa8.77□□□□□ -1.01
VAMP3-202ENST00000470357 FLT4P35916 1363 aa8.77□□□□□ -1.01
VAMP3-202ENST00000470357 ACTN4O43707 911 aaKnown RBP8.77□□□□□ -1.01
VAMP3-202ENST00000470357 DIAPH1O60610 1272 aaKnown RBP8.77□□□□□ -1.01
VAMP3-202ENST00000470357 TTLL12Q14166 644 aaPredicted RBP8.77□□□□□ -1.01
VAMP3-202ENST00000470357 AMHR2Q16671 573 aa8.77□□□□□ -1.01
VAMP3-202ENST00000470357 TJAP1Q5JTD0 557 aa8.77□□□□□ -1.01
VAMP3-202ENST00000470357 NBPF14Q5TI25 921 aa8.77□□□□□ -1.01
VAMP3-202ENST00000470357 MTRQ99707 1265 aa8.77□□□□□ -1.01
VAMP3-202ENST00000470357 PRR14Q9BWN1 585 aa8.77□□□□□ -1.01
VAMP3-202ENST00000470357 USP19O94966 1318 aa8.77□□□□□ -1.01
VAMP3-202ENST00000470357 COL3A1P02461 1466 aaPredicted RBP8.77□□□□□ -1.01
VAMP3-202ENST00000470357 NFAT5O94916 1531 aa8.76□□□□□ -1.01
VAMP3-202ENST00000470357 ABCC6O95255 1503 aa8.76□□□□□ -1.01
VAMP3-202ENST00000470357 GCGRP47871 477 aa8.76□□□□□ -1.01
VAMP3-202ENST00000470357 COPS2P61201 443 aa8.76□□□□□ -1.01
VAMP3-202ENST00000470357 HNRNPUQ00839 825 aaKnown RBP eCLIP8.76□□□□□ -1.01
VAMP3-202ENST00000470357 KCNC4Q03721 635 aa8.76□□□□□ -1.01
VAMP3-202ENST00000470357 ZNF784Q8NCA9 323 aaPredicted RBP8.76□□□□□ -1.01
VAMP3-202ENST00000470357 PDGFDQ9GZP0 370 aaPredicted RBP8.76□□□□□ -1.01
VAMP3-202ENST00000470357 STRN4Q9NRL3 753 aa8.76□□□□□ -1.01
VAMP3-202ENST00000470357 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
VAMP3-202ENST00000470357 PCDHB3Q9Y5E6 796 aa8.76□□□□□ -1.01
VAMP3-202ENST00000470357 CAMTA1Q9Y6Y1 1673 aa8.75□□□□□ -1.01
VAMP3-202ENST00000470357 PPM1GO15355 546 aaPredicted RBP8.75□□□□□ -1.01
VAMP3-202ENST00000470357 ITGBL1O95965 494 aaPredicted RBP8.75□□□□□ -1.01
VAMP3-202ENST00000470357 NEFMP07197 916 aa8.75□□□□□ -1.01
VAMP3-202ENST00000470357 CD46P15529 392 aa8.75□□□□□ -1.01
VAMP3-202ENST00000470357 SSTR3P32745 418 aaPredicted RBP8.75□□□□□ -1.01
VAMP3-202ENST00000470357 AMPHP49418 695 aa8.75□□□□□ -1.01
VAMP3-202ENST00000470357 ZC3H6P61129 1189 aaKnown RBP8.75□□□□□ -1.01
VAMP3-202ENST00000470357 PDE3BQ13370 1112 aa8.75□□□□□ -1.01
VAMP3-202ENST00000470357 TPRNQ4KMQ1 711 aa8.75□□□□□ -1.01
VAMP3-202ENST00000470357 LARP1Q6PKG0 1096 aaKnown RBP8.75□□□□□ -1.01
VAMP3-202ENST00000470357 ZNF516Q92618 1163 aa8.75□□□□□ -1.01
VAMP3-202ENST00000470357 USP35Q9P2H5 1018 aa8.75□□□□□ -1.01
VAMP3-202ENST00000470357 PPP1R1BQ9UD71 204 aaPredicted RBP8.75□□□□□ -1.01
VAMP3-202ENST00000470357 ZBED9Q6R2W3 1325 aa8.75□□□□□ -1.01
VAMP3-202ENST00000470357 PEAK1Q9H792 1746 aa8.74□□□□□ -1.01
VAMP3-202ENST00000470357 GCP02774 474 aa8.74□□□□□ -1.01
VAMP3-202ENST00000470357 U2AF1L5P0DN76 240 aaPredicted RBP8.74□□□□□ -1.01
VAMP3-202ENST00000470357 U2AF1Q01081 240 aaKnown RBP eCLIP8.74□□□□□ -1.01
VAMP3-202ENST00000470357 PDE4DQ08499 809 aa8.74□□□□□ -1.01
VAMP3-202ENST00000470357 RRS1Q15050 365 aaKnown RBP8.74□□□□□ -1.01
VAMP3-202ENST00000470357 BLOC1S3Q6QNY0 202 aa8.74□□□□□ -1.01
VAMP3-202ENST00000470357 IL21Q9HBE4 155 aa8.74□□□□□ -1.01
VAMP3-202ENST00000470357 ADAMTS8Q9UP79 889 aa8.74□□□□□ -1.01
VAMP3-202ENST00000470357 EMILIN1Q9Y6C2 1016 aa8.74□□□□□ -1.01
VAMP3-202ENST00000470357 FAM208AQ9UK61 1670 aaKnown RBP8.74□□□□□ -1.01
VAMP3-202ENST00000470357 MAP3K19Q56UN5 1328 aa8.74□□□□□ -1.01
VAMP3-202ENST00000470357 U2SURPO15042 1029 aaKnown RBP8.73□□□□□ -1.01
VAMP3-202ENST00000470357 PLSCR1O15162 318 aa8.73□□□□□ -1.01
VAMP3-202ENST00000470357 PUS10Q3MIT2 529 aaKnown RBP8.73□□□□□ -1.01
VAMP3-202ENST00000470357 NUTM2GQ5VZR2 741 aa8.73□□□□□ -1.01
VAMP3-202ENST00000470357 GIGYF2Q6Y7W6 1299 aaKnown RBP8.73□□□□□ -1.01
VAMP3-202ENST00000470357 PTF1AQ7RTS3 328 aa8.73□□□□□ -1.01
VAMP3-202ENST00000470357 PARP9Q8IXQ6 854 aa8.73□□□□□ -1.01
VAMP3-202ENST00000470357 TCP11L2Q8N4U5 519 aa8.73□□□□□ -1.01
VAMP3-202ENST00000470357 CEP350Q5VT06 3117 aa8.72□□□□□ -1.01
VAMP3-202ENST00000470357 CASZ1Q86V15 1759 aa8.72□□□□□ -1.01
VAMP3-202ENST00000470357 FUT2Q10981 343 aa8.72□□□□□ -1.01
VAMP3-202ENST00000470357 IP6K1Q92551 441 aa8.72□□□□□ -1.01
VAMP3-202ENST00000470357 RUNDC1Q96C34 613 aa8.72□□□□□ -1.01
VAMP3-202ENST00000470357 THRAP3Q9Y2W1 955 aaKnown RBP8.72□□□□□ -1.01
VAMP3-202ENST00000470357 CPDO75976 1380 aa8.72□□□□□ -1.01
VAMP3-202ENST00000470357 LMO7Q8WWI1 1683 aa8.72□□□□□ -1.01
VAMP3-202ENST00000470357 HOXC9P31274 260 aa8.71□□□□□ -1.02
VAMP3-202ENST00000470357 IL13P35225 146 aa8.71□□□□□ -1.02
VAMP3-202ENST00000470357 EVA1CP58658 441 aa8.71□□□□□ -1.02
VAMP3-202ENST00000470357 IFFO2Q5TF58 517 aa8.71□□□□□ -1.02
VAMP3-202ENST00000470357 ARHGEF25Q86VW2 580 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms