RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 SLC16A10Q8TF71 515 aa13.53□□□□□ -0.24
SMC1A-206ENST00000470241 MAP3K15Q6ZN16 1313 aa13.53□□□□□ -0.24
SMC1A-206ENST00000470241 ERVV-1B6SEH8 477 aa13.52□□□□□ -0.25
SMC1A-206ENST00000470241 ZBTB7AO95365 584 aa13.52□□□□□ -0.25
SMC1A-206ENST00000470241 FLIIQ13045 1269 aa13.52□□□□□ -0.25
SMC1A-206ENST00000470241 HLFQ16534 295 aa13.52□□□□□ -0.25
SMC1A-206ENST00000470241 ZBTB3Q9H5J0 574 aa13.52□□□□□ -0.25
SMC1A-206ENST00000470241 SMC4Q9NTJ3 1288 aa13.52□□□□□ -0.25
SMC1A-206ENST00000470241 C4AP0C0L4 1744 aa13.52□□□□□ -0.25
SMC1A-206ENST00000470241 RGL2O15211 777 aa13.51□□□□□ -0.25
SMC1A-206ENST00000470241 BRPF1P55201 1214 aaPredicted RBP13.51□□□□□ -0.25
SMC1A-206ENST00000470241 MSL1Q68DK7 614 aa13.51□□□□□ -0.25
SMC1A-206ENST00000470241 ANKRD13DQ6ZTN6 518 aa13.51□□□□□ -0.25
SMC1A-206ENST00000470241 PLBD2Q8NHP8 589 aa13.51□□□□□ -0.25
SMC1A-206ENST00000470241 MTFR1LQ9H019 292 aa13.51□□□□□ -0.25
SMC1A-206ENST00000470241 BCAR3O75815 825 aa13.5□□□□□ -0.25
SMC1A-206ENST00000470241 CLEC4GQ6UXB4 293 aa13.5□□□□□ -0.25
SMC1A-206ENST00000470241 NLGN1Q8N2Q7 840 aa13.5□□□□□ -0.25
SMC1A-206ENST00000470241 ADCY9O60503 1353 aa13.49□□□□□ -0.25
SMC1A-206ENST00000470241 DDX58O95786 925 aaKnown RBP13.49□□□□□ -0.25
SMC1A-206ENST00000470241 TM4SF1P30408 202 aa13.49□□□□□ -0.25
SMC1A-206ENST00000470241 TBC1D9BQ66K14 1250 aa13.49□□□□□ -0.25
SMC1A-206ENST00000470241 KSR2Q6VAB6 950 aa13.49□□□□□ -0.25
SMC1A-206ENST00000470241 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
SMC1A-206ENST00000470241 ATF5Q9Y2D1 282 aaPredicted RBP13.49□□□□□ -0.25
SMC1A-206ENST00000470241 ZNF652Q9Y2D9 606 aa13.49□□□□□ -0.25
SMC1A-206ENST00000470241 SCN7AQ01118 1682 aa13.49□□□□□ -0.25
SMC1A-206ENST00000470241 PI4KAP2A4QPH2 592 aa13.48□□□□□ -0.25
SMC1A-206ENST00000470241 FKBP5Q13451 457 aaPredicted RBP13.48□□□□□ -0.25
SMC1A-206ENST00000470241 NFIXQ14938 502 aa13.48□□□□□ -0.25
SMC1A-206ENST00000470241 RIC3Q7Z5B4 369 aa13.48□□□□□ -0.25
SMC1A-206ENST00000470241 PI4KAP1Q8N8J0 262 aa13.48□□□□□ -0.25
SMC1A-206ENST00000470241 SGIP1Q9BQI5 828 aa13.48□□□□□ -0.25
SMC1A-206ENST00000470241 RCAN3Q9UKA8 241 aa13.48□□□□□ -0.25
SMC1A-206ENST00000470241 NOB1Q9ULX3 412 aaKnown RBP13.48□□□□□ -0.25
SMC1A-206ENST00000470241 MAP3K2Q9Y2U5 619 aa13.48□□□□□ -0.25
SMC1A-206ENST00000470241 F6X3S4 739 aa13.47□□□□□ -0.25
SMC1A-206ENST00000470241 PTGER2P43116 358 aa13.47□□□□□ -0.25
SMC1A-206ENST00000470241 DDR1Q08345 913 aa13.47□□□□□ -0.25
SMC1A-206ENST00000470241 TCIRG1Q13488 830 aa13.47□□□□□ -0.25
SMC1A-206ENST00000470241 BICDL1Q6ZP65 573 aa13.47□□□□□ -0.25
SMC1A-206ENST00000470241 ZNF34Q8IZ26 560 aa13.47□□□□□ -0.25
SMC1A-206ENST00000470241 BCORQ6W2J9 1755 aa13.47□□□□□ -0.25
SMC1A-206ENST00000470241 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
SMC1A-206ENST00000470241 PTPRCP08575 1304 aa13.46□□□□□ -0.25
SMC1A-206ENST00000470241 MMP10P09238 476 aa13.46□□□□□ -0.25
SMC1A-206ENST00000470241 HSP90AB3PQ58FF7 597 aa13.46□□□□□ -0.25
SMC1A-206ENST00000470241 DNAAF4Q8WXU2 420 aa13.46□□□□□ -0.25
SMC1A-206ENST00000470241 ISCA1Q9BUE6 129 aa13.46□□□□□ -0.25
SMC1A-206ENST00000470241 METTL22Q9BUU2 404 aaPredicted RBP13.46□□□□□ -0.25
SMC1A-206ENST00000470241 NIP7Q9Y221 180 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMC1A-206ENST00000470241 UBN2Q6ZU65 1347 aa13.45□□□□□ -0.26
SMC1A-206ENST00000470241 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
SMC1A-206ENST00000470241 ATP5J2-PTCD1G3V325 749 aa13.45□□□□□ -0.26
SMC1A-206ENST00000470241 POLRMTO00411 1230 aaKnown RBP13.45□□□□□ -0.26
SMC1A-206ENST00000470241 GPTP24298 496 aa13.45□□□□□ -0.26
SMC1A-206ENST00000470241 SETDB2Q96T68 719 aa13.45□□□□□ -0.26
SMC1A-206ENST00000470241 MYD88Q99836 296 aa13.45□□□□□ -0.26
SMC1A-206ENST00000470241 SPON1Q9HCB6 807 aa13.45□□□□□ -0.26
SMC1A-206ENST00000470241 TRIM28Q13263 835 aaKnown RBP13.44□□□□□ -0.26
SMC1A-206ENST00000470241 NLRP10Q86W26 655 aa13.44□□□□□ -0.26
SMC1A-206ENST00000470241 ARHGAP45Q92619 1136 aa13.44□□□□□ -0.26
SMC1A-206ENST00000470241 SERPINB2P05120 415 aa13.43□□□□□ -0.26
SMC1A-206ENST00000470241 IGKV5-2P06315 115 aa13.43□□□□□ -0.26
SMC1A-206ENST00000470241 POLD1P28340 1107 aa13.43□□□□□ -0.26
SMC1A-206ENST00000470241 COL24A1Q17RW2 1714 aa13.43□□□□□ -0.26
SMC1A-206ENST00000470241 SUSD4Q5VX71 490 aa13.43□□□□□ -0.26
SMC1A-206ENST00000470241 FRAT1Q92837 279 aaPredicted RBP13.43□□□□□ -0.26
SMC1A-206ENST00000470241 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
SMC1A-206ENST00000470241 TNNQ9UQP3 1299 aa13.43□□□□□ -0.26
SMC1A-206ENST00000470241 PARP3Q9Y6F1 533 aa13.43□□□□□ -0.26
SMC1A-206ENST00000470241 CARMIL3Q8ND23 1372 aa13.43□□□□□ -0.26
SMC1A-206ENST00000470241 IPO8O15397 1037 aaKnown RBP13.42□□□□□ -0.26
SMC1A-206ENST00000470241 TRIM27P14373 513 aa13.42□□□□□ -0.26
SMC1A-206ENST00000470241 CWF19L2Q2TBE0 894 aaKnown RBP13.42□□□□□ -0.26
SMC1A-206ENST00000470241 PARP10Q53GL7 1025 aa13.42□□□□□ -0.26
SMC1A-206ENST00000470241 BEND3Q5T5X7 828 aa13.42□□□□□ -0.26
SMC1A-206ENST00000470241 ZKSCAN2Q63HK3 967 aa13.42□□□□□ -0.26
SMC1A-206ENST00000470241 ATF7IPQ6VMQ6 1270 aa13.42□□□□□ -0.26
SMC1A-206ENST00000470241 ARFGEF2Q9Y6D5 1785 aa13.41□□□□□ -0.26
SMC1A-206ENST00000470241 FAM177BA6PVY3 158 aa13.41□□□□□ -0.26
SMC1A-206ENST00000470241 NEURL1BA8MQ27 555 aa13.41□□□□□ -0.26
SMC1A-206ENST00000470241 NTSR2O95665 410 aa13.41□□□□□ -0.26
SMC1A-206ENST00000470241 NEXNQ0ZGT2 675 aa13.41□□□□□ -0.26
SMC1A-206ENST00000470241 SLC4A10Q6U841 1118 aa13.41□□□□□ -0.26
SMC1A-206ENST00000470241 CCDC191Q8NCU4 936 aa13.41□□□□□ -0.26
SMC1A-206ENST00000470241 LINS1Q8NG48 757 aa13.41□□□□□ -0.26
SMC1A-206ENST00000470241 CACNA1FO60840 1977 aa13.4□□□□□ -0.26
SMC1A-206ENST00000470241 PRR5LQ6MZQ0 368 aa13.4□□□□□ -0.26
SMC1A-206ENST00000470241 NBPF5PQ86XG9 351 aaPredicted RBP13.4□□□□□ -0.26
SMC1A-206ENST00000470241 UTP14AQ9BVJ6 771 aaKnown RBP13.4□□□□□ -0.26
SMC1A-206ENST00000470241 CWC25Q9NXE8 425 aaPredicted RBP13.4□□□□□ -0.26
SMC1A-206ENST00000470241 IBTKQ9P2D0 1353 aaPredicted RBP13.4□□□□□ -0.26
SMC1A-206ENST00000470241 ABCC4O15439 1325 aa13.39□□□□□ -0.27
SMC1A-206ENST00000470241 NUP98P52948 1817 aa13.39□□□□□ -0.27
SMC1A-206ENST00000470241 PLIN1O60240 522 aa13.39□□□□□ -0.27
SMC1A-206ENST00000470241 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
SMC1A-206ENST00000470241 PPP1R42Q7Z4L9 355 aa13.39□□□□□ -0.27
SMC1A-206ENST00000470241 NUTM1Q86Y26 1132 aa13.39□□□□□ -0.27
SMC1A-206ENST00000470241 CCDC24Q8N4L8 307 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms