RNA–Protein interactions for RNA: ENST00000468479.5

FDPS-207, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 938 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-207ENST00000468479 TEX13AQ9BXU3 409 aaPredicted RBP16.95■□□□□ 0.3
FDPS-207ENST00000468479 GPBP1L1Q9HC44 474 aaPredicted RBP16.95■□□□□ 0.3
FDPS-207ENST00000468479 UBR3Q6ZT12 1888 aa16.95■□□□□ 0.3
FDPS-207ENST00000468479 ZPR1O75312 459 aa16.94■□□□□ 0.3
FDPS-207ENST00000468479 HSPA6P17066 643 aa16.94■□□□□ 0.3
FDPS-207ENST00000468479 DNAJC10Q8IXB1 793 aa16.94■□□□□ 0.3
FDPS-207ENST00000468479 PARP3Q9Y6F1 533 aa16.94■□□□□ 0.3
FDPS-207ENST00000468479 PTPRCP08575 1304 aa16.94■□□□□ 0.3
FDPS-207ENST00000468479 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
FDPS-207ENST00000468479 HOXB7P09629 217 aa16.93■□□□□ 0.3
FDPS-207ENST00000468479 GYS1P13807 737 aa16.93■□□□□ 0.3
FDPS-207ENST00000468479 ZNF790Q6PG37 636 aa16.93■□□□□ 0.3
FDPS-207ENST00000468479 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
FDPS-207ENST00000468479 TSHZ2Q9NRE2 1034 aa16.93■□□□□ 0.3
FDPS-207ENST00000468479 SCN11AQ9UI33 1791 aa16.92■□□□□ 0.3
FDPS-207ENST00000468479 CYP19A1P11511 503 aaPredicted RBP16.92■□□□□ 0.3
FDPS-207ENST00000468479 INTS5Q6P9B9 1019 aaKnown RBP16.92■□□□□ 0.3
FDPS-207ENST00000468479 ZNF526Q8TF50 670 aaPredicted RBP16.92■□□□□ 0.3
FDPS-207ENST00000468479 FMNL2Q96PY5 1086 aa16.92■□□□□ 0.3
FDPS-207ENST00000468479 USP42Q9H9J4 1324 aaKnown RBP16.92■□□□□ 0.3
FDPS-207ENST00000468479 BTBD11A6QL63 1104 aa16.91■□□□□ 0.3
FDPS-207ENST00000468479 ELL2O00472 640 aaPredicted RBP16.91■□□□□ 0.3
FDPS-207ENST00000468479 ABCC4O15439 1325 aa16.91■□□□□ 0.3
FDPS-207ENST00000468479 CICQ96RK0 1608 aaPredicted RBP16.9■□□□□ 0.3
FDPS-207ENST00000468479 A0A087WZG4 1122 aa16.9■□□□□ 0.3
FDPS-207ENST00000468479 TGFB2P61812 414 aa16.9■□□□□ 0.3
FDPS-207ENST00000468479 CCDC30Q5VVM6 783 aa16.9■□□□□ 0.3
FDPS-207ENST00000468479 RWDD1Q9H446 243 aaPredicted RBP16.9■□□□□ 0.3
FDPS-207ENST00000468479 ADAMTS7Q9UKP4 1686 aa16.9■□□□□ 0.3
FDPS-207ENST00000468479 ADCY9O60503 1353 aa16.89■□□□□ 0.3
FDPS-207ENST00000468479 ITPRIPQ8IWB1 547 aa16.89■□□□□ 0.29
FDPS-207ENST00000468479 COL5A3P25940 1745 aaPredicted RBP16.89■□□□□ 0.29
FDPS-207ENST00000468479 KCPQ6ZWJ8 1503 aa16.89■□□□□ 0.29
FDPS-207ENST00000468479 HEG1Q9ULI3 1381 aa16.89■□□□□ 0.29
FDPS-207ENST00000468479 TMEM57Q8N5G2 664 aa16.88■□□□□ 0.29
FDPS-207ENST00000468479 STK31Q9BXU1 1019 aa16.88■□□□□ 0.29
FDPS-207ENST00000468479 MIS18AQ9NYP9 233 aa16.88■□□□□ 0.29
FDPS-207ENST00000468479 TNNQ9UQP3 1299 aa16.88■□□□□ 0.29
FDPS-207ENST00000468479 COL15A1P39059 1388 aa16.88■□□□□ 0.29
FDPS-207ENST00000468479 ZNF496Q96IT1 587 aaPredicted RBP16.87■□□□□ 0.29
FDPS-207ENST00000468479 ZBTB40Q9NUA8 1239 aa16.87■□□□□ 0.29
FDPS-207ENST00000468479 SRP68Q9UHB9 627 aaKnown RBP16.87■□□□□ 0.29
FDPS-207ENST00000468479 NARFQ9UHQ1 456 aa16.87■□□□□ 0.29
FDPS-207ENST00000468479 ZBTB1Q9Y2K1 713 aa16.87■□□□□ 0.29
FDPS-207ENST00000468479 HDAC1Q13547 482 aaPredicted RBP16.86■□□□□ 0.29
FDPS-207ENST00000468479 INTS3Q68E01 1043 aaKnown RBP16.86■□□□□ 0.29
FDPS-207ENST00000468479 WDR90Q96KV7 1748 aa16.85■□□□□ 0.29
FDPS-207ENST00000468479 KRT24Q2M2I5 525 aa16.85■□□□□ 0.29
FDPS-207ENST00000468479 USPL1Q5W0Q7 1092 aa16.85■□□□□ 0.29
FDPS-207ENST00000468479 C10orf71Q711Q0 1435 aa16.85■□□□□ 0.29
FDPS-207ENST00000468479 TJP1Q07157 1748 aa16.84■□□□□ 0.29
FDPS-207ENST00000468479 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
FDPS-207ENST00000468479 IL6STP40189 918 aaPredicted RBP16.84■□□□□ 0.29
FDPS-207ENST00000468479 EIF4A1P60842 406 aaKnown RBP16.84■□□□□ 0.29
FDPS-207ENST00000468479 PCDHB15Q9Y5E8 787 aa16.84■□□□□ 0.29
FDPS-207ENST00000468479 KDM3BQ7LBC6 1761 aa16.84■□□□□ 0.29
FDPS-207ENST00000468479 ZBTB7BO15156 539 aaPredicted RBP16.83■□□□□ 0.28
FDPS-207ENST00000468479 CACNA1FO60840 1977 aa16.83■□□□□ 0.28
FDPS-207ENST00000468479 SNRPA1P09661 255 aaKnown RBP16.83■□□□□ 0.28
FDPS-207ENST00000468479 IGHDP01880 384 aa16.82■□□□□ 0.28
FDPS-207ENST00000468479 EIF5P55010 431 aaKnown RBP16.82■□□□□ 0.28
FDPS-207ENST00000468479 ZNF330Q9Y3S2 320 aaPredicted RBP16.82■□□□□ 0.28
FDPS-207ENST00000468479 TM4SF1P30408 202 aa16.81■□□□□ 0.28
FDPS-207ENST00000468479 CCT4P50991 539 aaKnown RBP16.81■□□□□ 0.28
FDPS-207ENST00000468479 PXDNLA1KZ92 1463 aa16.8■□□□□ 0.28
FDPS-207ENST00000468479 C4AP0C0L4 1744 aa16.8■□□□□ 0.28
FDPS-207ENST00000468479 A0A0G2JLW4 131 aa16.8■□□□□ 0.28
FDPS-207ENST00000468479 POLRMTO00411 1230 aaKnown RBP16.8■□□□□ 0.28
FDPS-207ENST00000468479 DDR1Q08345 913 aa16.8■□□□□ 0.28
FDPS-207ENST00000468479 SIPA1L3O60292 1781 aaPredicted RBP16.79■□□□□ 0.28
FDPS-207ENST00000468479 MYH14Q7Z406 1995 aaKnown RBP16.79■□□□□ 0.28
FDPS-207ENST00000468479 DPEP1P16444 411 aa16.79■□□□□ 0.28
FDPS-207ENST00000468479 HDGFL1Q5TGJ6 251 aa16.79■□□□□ 0.28
FDPS-207ENST00000468479 PIM2Q9P1W9 311 aa16.79■□□□□ 0.28
FDPS-207ENST00000468479 WWC3Q9ULE0 1092 aa16.79■□□□□ 0.28
FDPS-207ENST00000468479 BCS1LQ9Y276 419 aa16.79■□□□□ 0.28
FDPS-207ENST00000468479 UBR2Q8IWV8 1755 aa16.79■□□□□ 0.28
FDPS-207ENST00000468479 NFIXQ14938 502 aa16.78■□□□□ 0.28
FDPS-207ENST00000468479 ZNF652Q9Y2D9 606 aa16.78■□□□□ 0.28
FDPS-207ENST00000468479 KCNQ3O43525 872 aa16.77■□□□□ 0.28
FDPS-207ENST00000468479 FLIIQ13045 1269 aa16.77■□□□□ 0.28
FDPS-207ENST00000468479 DALRD3Q5D0E6 543 aaKnown RBP16.77■□□□□ 0.28
FDPS-207ENST00000468479 PDZRN3Q9UPQ7 1066 aa16.77■□□□□ 0.28
FDPS-207ENST00000468479 RBM19Q9Y4C8 960 aaKnown RBP16.77■□□□□ 0.28
FDPS-207ENST00000468479 N4BP2Q86UW6 1770 aaPredicted RBP16.77■□□□□ 0.27
FDPS-207ENST00000468479 KIF3CO14782 793 aa16.76■□□□□ 0.27
FDPS-207ENST00000468479 NPHP1O15259 732 aa16.76■□□□□ 0.27
FDPS-207ENST00000468479 A1BGP04217 495 aa16.76■□□□□ 0.27
FDPS-207ENST00000468479 SERPINB2P05120 415 aa16.76■□□□□ 0.27
FDPS-207ENST00000468479 APLP1P51693 650 aa16.76■□□□□ 0.27
FDPS-207ENST00000468479 CARMIL3Q8ND23 1372 aa16.76■□□□□ 0.27
FDPS-207ENST00000468479 RGL2O15211 777 aa16.75■□□□□ 0.27
FDPS-207ENST00000468479 DZIP3Q86Y13 1208 aaKnown RBP16.75■□□□□ 0.27
FDPS-207ENST00000468479 SMC5Q8IY18 1101 aa16.75■□□□□ 0.27
FDPS-207ENST00000468479 SETDB2Q96T68 719 aa16.75■□□□□ 0.27
FDPS-207ENST00000468479 BCL2L12Q9HB09 334 aa16.75■□□□□ 0.27
FDPS-207ENST00000468479 DBF4Q9UBU7 674 aaPredicted RBP16.75■□□□□ 0.27
FDPS-207ENST00000468479 TBC1D2BQ9UPU7 963 aa16.75■□□□□ 0.27
FDPS-207ENST00000468479 USP16Q9Y5T5 823 aa16.75■□□□□ 0.27
FDPS-207ENST00000468479 VIRMAQ69YN4 1812 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms