RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 ST5P78524 1137 aa23■■□□□ 1.27
TRIM56-203ENST00000467847 ZNF219Q9P2Y4 722 aaPredicted RBP23■■□□□ 1.27
TRIM56-203ENST00000467847 CACNA1SQ13698 1873 aa23■■□□□ 1.27
TRIM56-203ENST00000467847 FER1L6Q2WGJ9 1857 aa22.99■■□□□ 1.27
TRIM56-203ENST00000467847 GLTPD2A6NH11 291 aa22.99■■□□□ 1.27
TRIM56-203ENST00000467847 C21orf2O43822 256 aa22.99■■□□□ 1.27
TRIM56-203ENST00000467847 DCTN1Q14203 1278 aa22.99■■□□□ 1.27
TRIM56-203ENST00000467847 HTATSF1O43719 755 aaKnown RBP22.98■■□□□ 1.27
TRIM56-203ENST00000467847 DICER1Q9UPY3 1922 aaKnown RBP22.97■■□□□ 1.27
TRIM56-203ENST00000467847 SLX4Q8IY92 1834 aa22.96■■□□□ 1.27
TRIM56-203ENST00000467847 HSPA1AP0DMV8 641 aaKnown RBP22.96■■□□□ 1.27
TRIM56-203ENST00000467847 HSPA1BP0DMV9 641 aaKnown RBP22.96■■□□□ 1.27
TRIM56-203ENST00000467847 VEGFAP15692 232 aaPredicted RBP22.96■■□□□ 1.27
TRIM56-203ENST00000467847 ZNF652Q9Y2D9 606 aa22.96■■□□□ 1.27
TRIM56-203ENST00000467847 ARFGEF2Q9Y6D5 1785 aa22.96■■□□□ 1.27
TRIM56-203ENST00000467847 STYK1Q6J9G0 422 aa22.95■■□□□ 1.26
TRIM56-203ENST00000467847 CLEC4GQ6UXB4 293 aa22.95■■□□□ 1.26
TRIM56-203ENST00000467847 NBPF5PQ86XG9 351 aaPredicted RBP22.95■■□□□ 1.26
TRIM56-203ENST00000467847 DLG5Q8TDM6 1919 aa22.95■■□□□ 1.26
TRIM56-203ENST00000467847 CNKSR1Q969H4 720 aa22.95■■□□□ 1.26
TRIM56-203ENST00000467847 SRGNP10124 158 aa22.94■■□□□ 1.26
TRIM56-203ENST00000467847 TAF7Q15545 349 aaPredicted RBP22.94■■□□□ 1.26
TRIM56-203ENST00000467847 PCNTO95613 3336 aa22.94■■□□□ 1.26
TRIM56-203ENST00000467847 NBPF26B4DH59 902 aa22.93■■□□□ 1.26
TRIM56-203ENST00000467847 NEFMP07197 916 aa22.93■■□□□ 1.26
TRIM56-203ENST00000467847 ERFEQ4G0M1 354 aa22.93■■□□□ 1.26
TRIM56-203ENST00000467847 DPY19L2Q6NUT2 758 aa22.93■■□□□ 1.26
TRIM56-203ENST00000467847 PRPF40BQ6NWY9 871 aaKnown RBP22.93■■□□□ 1.26
TRIM56-203ENST00000467847 NBPF10Q6P3W6 841 aaKnown RBP22.93■■□□□ 1.26
TRIM56-203ENST00000467847 NBPF15Q8N660 670 aa22.93■■□□□ 1.26
TRIM56-203ENST00000467847 MASTLQ96GX5 879 aa22.93■■□□□ 1.26
TRIM56-203ENST00000467847 LAMB4A4D0S4 1761 aa22.93■■□□□ 1.26
TRIM56-203ENST00000467847 TAOK3Q9H2K8 898 aa22.92■■□□□ 1.26
TRIM56-203ENST00000467847 MIS18AQ9NYP9 233 aa22.92■■□□□ 1.26
TRIM56-203ENST00000467847 LTBP3Q9NS15 1303 aa22.91■■□□□ 1.26
TRIM56-203ENST00000467847 SOGA3Q5TF21 947 aa22.9■■□□□ 1.26
TRIM56-203ENST00000467847 NIP7Q9Y221 180 aaKnown RBP eCLIP22.9■■□□□ 1.26
TRIM56-203ENST00000467847 KDM3BQ7LBC6 1761 aa22.9■■□□□ 1.26
TRIM56-203ENST00000467847 RGL2O15211 777 aa22.89■■□□□ 1.25
TRIM56-203ENST00000467847 TPTE2Q6XPS3 522 aa22.89■■□□□ 1.25
TRIM56-203ENST00000467847 FAM177BA6PVY3 158 aa22.87■■□□□ 1.25
TRIM56-203ENST00000467847 PNISRQ8TF01 805 aaKnown RBP22.87■■□□□ 1.25
TRIM56-203ENST00000467847 POTECB2RU33 542 aa22.86■■□□□ 1.25
TRIM56-203ENST00000467847 NPR1P16066 1061 aa22.86■■□□□ 1.25
TRIM56-203ENST00000467847 HLFQ16534 295 aa22.85■■□□□ 1.25
TRIM56-203ENST00000467847 PLEKHF1Q96S99 279 aa22.85■■□□□ 1.25
TRIM56-203ENST00000467847 KLRG2A4D1S0 409 aaPredicted RBP22.84■■□□□ 1.25
TRIM56-203ENST00000467847 NFE2L2Q16236 605 aa22.84■■□□□ 1.25
TRIM56-203ENST00000467847 CCDC93Q567U6 631 aa22.84■■□□□ 1.25
TRIM56-203ENST00000467847 NGEFQ8N5V2 710 aa22.84■■□□□ 1.25
TRIM56-203ENST00000467847 C7orf43Q8WVR3 580 aa22.84■■□□□ 1.25
TRIM56-203ENST00000467847 NUP98P52948 1817 aa22.83■■□□□ 1.25
TRIM56-203ENST00000467847 GTF2E1P29083 439 aaPredicted RBP22.83■■□□□ 1.25
TRIM56-203ENST00000467847 THUMPD2Q9BTF0 503 aaKnown RBP22.83■■□□□ 1.25
TRIM56-203ENST00000467847 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
TRIM56-203ENST00000467847 DDNO94850 711 aaPredicted RBP22.82■■□□□ 1.24
TRIM56-203ENST00000467847 PNNQ9H307 717 aaKnown RBP22.82■■□□□ 1.24
TRIM56-203ENST00000467847 EIF4A1P60842 406 aaKnown RBP22.81■■□□□ 1.24
TRIM56-203ENST00000467847 KIF6Q6ZMV9 814 aa22.8■■□□□ 1.24
TRIM56-203ENST00000467847 RRP7AQ9Y3A4 280 aaKnown RBP22.8■■□□□ 1.24
TRIM56-203ENST00000467847 ERVV-1B6SEH8 477 aa22.79■■□□□ 1.24
TRIM56-203ENST00000467847 FKBP4Q02790 459 aaKnown RBP eCLIP22.79■■□□□ 1.24
TRIM56-203ENST00000467847 NYXQ9GZU5 481 aa22.79■■□□□ 1.24
TRIM56-203ENST00000467847 MAP3K15Q6ZN16 1313 aa22.79■■□□□ 1.24
TRIM56-203ENST00000467847 MYL6BP14649 208 aa22.78■■□□□ 1.24
TRIM56-203ENST00000467847 ALDH1B1P30837 517 aa22.78■■□□□ 1.24
TRIM56-203ENST00000467847 OLFM4Q6UX06 510 aa22.78■■□□□ 1.24
TRIM56-203ENST00000467847 RTKN2Q8IZC4 609 aa22.78■■□□□ 1.24
TRIM56-203ENST00000467847 ZNF277Q9NRM2 450 aaPredicted RBP22.78■■□□□ 1.24
TRIM56-203ENST00000467847 CHADLQ6NUI6 762 aa22.77■■□□□ 1.24
TRIM56-203ENST00000467847 TTLL7Q6ZT98 887 aa22.77■■□□□ 1.24
TRIM56-203ENST00000467847 MKRN1Q9UHC7 482 aaKnown RBP22.77■■□□□ 1.24
TRIM56-203ENST00000467847 SCN4AP35499 1836 aa22.77■■□□□ 1.24
TRIM56-203ENST00000467847 ABCC12Q96J65 1359 aa22.76■■□□□ 1.23
TRIM56-203ENST00000467847 IQCA1LA6NCM1 817 aa22.76■■□□□ 1.23
TRIM56-203ENST00000467847 NUTM1Q86Y26 1132 aa22.76■■□□□ 1.23
TRIM56-203ENST00000467847 POTEIP0CG38 1075 aa22.75■■□□□ 1.23
TRIM56-203ENST00000467847 POTEJP0CG39 1038 aa22.75■■□□□ 1.23
TRIM56-203ENST00000467847 ZBTB3Q9H5J0 574 aa22.75■■□□□ 1.23
TRIM56-203ENST00000467847 CREBZFQ9NS37 354 aa22.75■■□□□ 1.23
TRIM56-203ENST00000467847 GPTP24298 496 aa22.74■■□□□ 1.23
TRIM56-203ENST00000467847 CRY2Q49AN0 593 aa22.74■■□□□ 1.23
TRIM56-203ENST00000467847 L3MBTL3Q96JM7 780 aaPredicted RBP22.74■■□□□ 1.23
TRIM56-203ENST00000467847 TSPYL4Q9UJ04 414 aa22.74■■□□□ 1.23
TRIM56-203ENST00000467847 ZNF541Q9H0D2 1346 aa22.73■■□□□ 1.23
TRIM56-203ENST00000467847 IBTKQ9P2D0 1353 aaPredicted RBP22.73■■□□□ 1.23
TRIM56-203ENST00000467847 SYNE4Q8N205 404 aa22.72■■□□□ 1.23
TRIM56-203ENST00000467847 RPGRQ92834 1020 aaKnown RBP22.72■■□□□ 1.23
TRIM56-203ENST00000467847 AIDAQ96BJ3 306 aa22.72■■□□□ 1.23
TRIM56-203ENST00000467847 ERBB4Q15303 1308 aa22.72■■□□□ 1.23
TRIM56-203ENST00000467847 UBN2Q6ZU65 1347 aa22.72■■□□□ 1.23
TRIM56-203ENST00000467847 IARSP41252 1262 aaKnown RBP22.71■■□□□ 1.23
TRIM56-203ENST00000467847 RIPK4P57078 832 aa22.71■■□□□ 1.23
TRIM56-203ENST00000467847 RALBP1Q15311 655 aa22.71■■□□□ 1.23
TRIM56-203ENST00000467847 SUSD4Q5VX71 490 aa22.71■■□□□ 1.23
TRIM56-203ENST00000467847 TAF1DQ9H5J8 278 aaPredicted RBP22.71■■□□□ 1.23
TRIM56-203ENST00000467847 RIC1Q4ADV7 1423 aa22.71■■□□□ 1.23
TRIM56-203ENST00000467847 LDHDQ86WU2 507 aa22.7■■□□□ 1.22
TRIM56-203ENST00000467847 ZNF34Q8IZ26 560 aa22.7■■□□□ 1.22
TRIM56-203ENST00000467847 GIGYF2Q6Y7W6 1299 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms