RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 RGL2O15211 777 aa16.49■□□□□ 0.23
UBR4-211ENST00000467272 CLEC4GQ6UXB4 293 aa16.49■□□□□ 0.23
UBR4-211ENST00000467272 CNBD1Q8NA66 436 aa16.49■□□□□ 0.23
UBR4-211ENST00000467272 SNED1Q8TER0 1413 aa16.49■□□□□ 0.23
UBR4-211ENST00000467272 MASTLQ96GX5 879 aa16.49■□□□□ 0.23
UBR4-211ENST00000467272 PHACTR3Q96KR7 559 aa16.49■□□□□ 0.23
UBR4-211ENST00000467272 SETDB2Q96T68 719 aa16.49■□□□□ 0.23
UBR4-211ENST00000467272 PCGF6Q9BYE7 350 aa16.49■□□□□ 0.23
UBR4-211ENST00000467272 CNTNAP1P78357 1384 aa16.49■□□□□ 0.23
UBR4-211ENST00000467272 CAPN15O75808 1086 aa16.48■□□□□ 0.23
UBR4-211ENST00000467272 ITGBL1O95965 494 aaPredicted RBP16.48■□□□□ 0.23
UBR4-211ENST00000467272 TEFQ10587 303 aa16.48■□□□□ 0.23
UBR4-211ENST00000467272 SOGA3Q5TF21 947 aa16.48■□□□□ 0.23
UBR4-211ENST00000467272 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
UBR4-211ENST00000467272 ADAMTSL1Q8N6G6 1762 aa16.47■□□□□ 0.23
UBR4-211ENST00000467272 TAF1DQ9H5J8 278 aaPredicted RBP16.47■□□□□ 0.23
UBR4-211ENST00000467272 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
UBR4-211ENST00000467272 CC2D1BQ5T0F9 858 aaKnown RBP16.46■□□□□ 0.23
UBR4-211ENST00000467272 LDHDQ86WU2 507 aa16.46■□□□□ 0.23
UBR4-211ENST00000467272 DZIP3Q86Y13 1208 aaKnown RBP16.46■□□□□ 0.23
UBR4-211ENST00000467272 RSPH6AQ9H0K4 717 aa16.46■□□□□ 0.23
UBR4-211ENST00000467272 PRAMEF22A3QJZ6 481 aa16.45■□□□□ 0.22
UBR4-211ENST00000467272 MKRN1Q9UHC7 482 aaKnown RBP16.45■□□□□ 0.22
UBR4-211ENST00000467272 IQCA1LA6NCM1 817 aa16.44■□□□□ 0.22
UBR4-211ENST00000467272 BTBD11A6QL63 1104 aa16.44■□□□□ 0.22
UBR4-211ENST00000467272 NBPF26B4DH59 902 aa16.44■□□□□ 0.22
UBR4-211ENST00000467272 FOXN1O15353 648 aa16.44■□□□□ 0.22
UBR4-211ENST00000467272 ST5P78524 1137 aa16.44■□□□□ 0.22
UBR4-211ENST00000467272 NBPF10Q6P3W6 841 aaKnown RBP16.44■□□□□ 0.22
UBR4-211ENST00000467272 NBPF15Q8N660 670 aa16.44■□□□□ 0.22
UBR4-211ENST00000467272 ZNF541Q9H0D2 1346 aa16.44■□□□□ 0.22
UBR4-211ENST00000467272 SCN4AP35499 1836 aa16.43■□□□□ 0.22
UBR4-211ENST00000467272 NPR1P16066 1061 aa16.43■□□□□ 0.22
UBR4-211ENST00000467272 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
UBR4-211ENST00000467272 PRDM10Q9NQV6 1147 aa16.43■□□□□ 0.22
UBR4-211ENST00000467272 FZD9O00144 591 aa16.42■□□□□ 0.22
UBR4-211ENST00000467272 U2SURPO15042 1029 aaKnown RBP16.42■□□□□ 0.22
UBR4-211ENST00000467272 PIP4K2AP48426 406 aaPredicted RBP16.42■□□□□ 0.22
UBR4-211ENST00000467272 CCDC93Q567U6 631 aa16.42■□□□□ 0.22
UBR4-211ENST00000467272 OLFM4Q6UX06 510 aa16.42■□□□□ 0.22
UBR4-211ENST00000467272 ZNF330Q9Y3S2 320 aaPredicted RBP16.42■□□□□ 0.22
UBR4-211ENST00000467272 VEGFBP49765 207 aa16.41■□□□□ 0.22
UBR4-211ENST00000467272 NBPF5PQ86XG9 351 aaPredicted RBP16.41■□□□□ 0.22
UBR4-211ENST00000467272 WBP1LQ9NX94 342 aa16.41■□□□□ 0.22
UBR4-211ENST00000467272 TMEM88BA6NKF7 163 aa16.4■□□□□ 0.22
UBR4-211ENST00000467272 SNRPA1P09661 255 aaKnown RBP16.4■□□□□ 0.22
UBR4-211ENST00000467272 PRKAR2BP31323 418 aa16.4■□□□□ 0.22
UBR4-211ENST00000467272 CRY2Q49AN0 593 aa16.4■□□□□ 0.22
UBR4-211ENST00000467272 ZNF277Q9NRM2 450 aaPredicted RBP16.4■□□□□ 0.22
UBR4-211ENST00000467272 RASSF10A6NK89 507 aa16.39■□□□□ 0.21
UBR4-211ENST00000467272 TPTE2Q6XPS3 522 aa16.39■□□□□ 0.21
UBR4-211ENST00000467272 RTKN2Q8IZC4 609 aa16.39■□□□□ 0.21
UBR4-211ENST00000467272 COL4A5P29400 1685 aa16.39■□□□□ 0.21
UBR4-211ENST00000467272 PSMD1Q99460 953 aa16.38■□□□□ 0.21
UBR4-211ENST00000467272 HACL1Q9UJ83 578 aa16.38■□□□□ 0.21
UBR4-211ENST00000467272 ZNF652Q9Y2D9 606 aa16.38■□□□□ 0.21
UBR4-211ENST00000467272 HTATSF1O43719 755 aaKnown RBP16.37■□□□□ 0.21
UBR4-211ENST00000467272 EPHX2P34913 555 aa16.37■□□□□ 0.21
UBR4-211ENST00000467272 HLFQ16534 295 aa16.37■□□□□ 0.21
UBR4-211ENST00000467272 MCM10Q7L590 875 aa16.37■□□□□ 0.21
UBR4-211ENST00000467272 RIC1Q4ADV7 1423 aa16.36■□□□□ 0.21
UBR4-211ENST00000467272 CACNA1SQ13698 1873 aa16.36■□□□□ 0.21
UBR4-211ENST00000467272 HOXA10P31260 410 aaPredicted RBP16.36■□□□□ 0.21
UBR4-211ENST00000467272 IARSP41252 1262 aaKnown RBP16.36■□□□□ 0.21
UBR4-211ENST00000467272 CTCFP49711 727 aaPredicted RBP16.36■□□□□ 0.21
UBR4-211ENST00000467272 PNMA8AQ86V59 439 aaPredicted RBP16.36■□□□□ 0.21
UBR4-211ENST00000467272 GPC2Q8N158 579 aa16.36■□□□□ 0.21
UBR4-211ENST00000467272 NIP7Q9Y221 180 aaKnown RBP eCLIP16.36■□□□□ 0.21
UBR4-211ENST00000467272 ALDH1B1P30837 517 aa16.35■□□□□ 0.21
UBR4-211ENST00000467272 NPM2Q86SE8 214 aaKnown RBP16.35■□□□□ 0.21
UBR4-211ENST00000467272 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
UBR4-211ENST00000467272 ABCC12Q96J65 1359 aa16.35■□□□□ 0.21
UBR4-211ENST00000467272 LTBP1Q14766 1721 aa16.34■□□□□ 0.21
UBR4-211ENST00000467272 NPHP1O15259 732 aa16.34■□□□□ 0.21
UBR4-211ENST00000467272 CNTROBQ8N137 903 aa16.34■□□□□ 0.21
UBR4-211ENST00000467272 RNF123Q5XPI4 1314 aa16.34■□□□□ 0.21
UBR4-211ENST00000467272 THSD7BQ9C0I4 1608 aa16.34■□□□□ 0.21
UBR4-211ENST00000467272 ERVV-1B6SEH8 477 aa16.33■□□□□ 0.2
UBR4-211ENST00000467272 MAP1SQ66K74 1059 aaPredicted RBP16.33■□□□□ 0.2
UBR4-211ENST00000467272 IBTKQ9P2D0 1353 aaPredicted RBP16.33■□□□□ 0.2
UBR4-211ENST00000467272 HSPA8P11142 646 aaKnown RBP16.32■□□□□ 0.2
UBR4-211ENST00000467272 DCTN1Q14203 1278 aa16.32■□□□□ 0.2
UBR4-211ENST00000467272 EAPPQ56P03 285 aaPredicted RBP16.32■□□□□ 0.2
UBR4-211ENST00000467272 CC2D2BQ6DHV5 1058 aa16.32■□□□□ 0.2
UBR4-211ENST00000467272 CCER1Q8TC90 406 aaPredicted RBP16.32■□□□□ 0.2
UBR4-211ENST00000467272 PPP2R1AP30153 589 aa16.31■□□□□ 0.2
UBR4-211ENST00000467272 SCNN1DP51172 638 aa16.31■□□□□ 0.2
UBR4-211ENST00000467272 LBX1P52954 281 aa16.31■□□□□ 0.2
UBR4-211ENST00000467272 TAF7Q15545 349 aaPredicted RBP16.31■□□□□ 0.2
UBR4-211ENST00000467272 DEFB115Q30KQ5 88 aa16.31■□□□□ 0.2
UBR4-211ENST00000467272 SLC51AQ86UW1 340 aa16.31■□□□□ 0.2
UBR4-211ENST00000467272 UBN2Q6ZU65 1347 aa16.3■□□□□ 0.2
UBR4-211ENST00000467272 WDR33Q9C0J8 1336 aaKnown RBP16.3■□□□□ 0.2
UBR4-211ENST00000467272 RTF1Q92541 710 aaKnown RBP16.3■□□□□ 0.2
UBR4-211ENST00000467272 CFAP53Q96M91 514 aa16.3■□□□□ 0.2
UBR4-211ENST00000467272 DDX21Q9NR30 783 aaKnown RBP eCLIP16.3■□□□□ 0.2
UBR4-211ENST00000467272 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
UBR4-211ENST00000467272 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
UBR4-211ENST00000467272 AIDAQ96BJ3 306 aa16.29■□□□□ 0.2
UBR4-211ENST00000467272 NUDCQ9Y266 331 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms