RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 PHACTR3Q96KR7 559 aa15.93■□□□□ 0.14
GTF3A-205ENST00000466776 A1BGP04217 495 aa15.92■□□□□ 0.14
GTF3A-205ENST00000466776 SNRPA1P09661 255 aaKnown RBP15.92■□□□□ 0.14
GTF3A-205ENST00000466776 VEGFAP15692 232 aaPredicted RBP15.92■□□□□ 0.14
GTF3A-205ENST00000466776 DPY19L2Q6NUT2 758 aa15.92■□□□□ 0.14
GTF3A-205ENST00000466776 CNKSR1Q969H4 720 aa15.92■□□□□ 0.14
GTF3A-205ENST00000466776 SLX4Q8IY92 1834 aa15.91■□□□□ 0.14
GTF3A-205ENST00000466776 HTATSF1O43719 755 aaKnown RBP15.91■□□□□ 0.14
GTF3A-205ENST00000466776 CAMTA2O94983 1202 aa15.91■□□□□ 0.14
GTF3A-205ENST00000466776 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
GTF3A-205ENST00000466776 SOGA3Q5TF21 947 aa15.91■□□□□ 0.14
GTF3A-205ENST00000466776 DNAJC5GQ8N7S2 189 aa15.91■□□□□ 0.14
GTF3A-205ENST00000466776 NFKBIEO00221 500 aa15.9■□□□□ 0.14
GTF3A-205ENST00000466776 CLEC4GQ6UXB4 293 aa15.9■□□□□ 0.14
GTF3A-205ENST00000466776 KCNQ3O43525 872 aa15.89■□□□□ 0.13
GTF3A-205ENST00000466776 C21orf2O43822 256 aa15.89■□□□□ 0.13
GTF3A-205ENST00000466776 ERFEQ4G0M1 354 aa15.89■□□□□ 0.13
GTF3A-205ENST00000466776 STYK1Q6J9G0 422 aa15.89■□□□□ 0.13
GTF3A-205ENST00000466776 MCM10Q7L590 875 aa15.89■□□□□ 0.13
GTF3A-205ENST00000466776 KLRG1Q96E93 195 aa15.89■□□□□ 0.13
GTF3A-205ENST00000466776 TAOK3Q9H2K8 898 aa15.89■□□□□ 0.13
GTF3A-205ENST00000466776 RGL2O15211 777 aa15.88■□□□□ 0.13
GTF3A-205ENST00000466776 NBPF5PQ86XG9 351 aaPredicted RBP15.88■□□□□ 0.13
GTF3A-205ENST00000466776 CCDC24Q8N4L8 307 aa15.88■□□□□ 0.13
GTF3A-205ENST00000466776 MASTLQ96GX5 879 aa15.88■□□□□ 0.13
GTF3A-205ENST00000466776 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
GTF3A-205ENST00000466776 USP16Q9Y5T5 823 aa15.88■□□□□ 0.13
GTF3A-205ENST00000466776 LTBP3Q9NS15 1303 aa15.88■□□□□ 0.13
GTF3A-205ENST00000466776 KDM3BQ7LBC6 1761 aa15.87■□□□□ 0.13
GTF3A-205ENST00000466776 NUP98P52948 1817 aa15.87■□□□□ 0.13
GTF3A-205ENST00000466776 SRGNP10124 158 aa15.87■□□□□ 0.13
GTF3A-205ENST00000466776 PRELPP51888 382 aa15.86■□□□□ 0.13
GTF3A-205ENST00000466776 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
GTF3A-205ENST00000466776 PRPF40BQ6NWY9 871 aaKnown RBP15.86■□□□□ 0.13
GTF3A-205ENST00000466776 SCN4AP35499 1836 aa15.86■□□□□ 0.13
GTF3A-205ENST00000466776 PIP4K2AP48426 406 aaPredicted RBP15.85■□□□□ 0.13
GTF3A-205ENST00000466776 TPTE2Q6XPS3 522 aa15.85■□□□□ 0.13
GTF3A-205ENST00000466776 PNISRQ8TF01 805 aaKnown RBP15.85■□□□□ 0.13
GTF3A-205ENST00000466776 PNNQ9H307 717 aaKnown RBP15.85■□□□□ 0.13
GTF3A-205ENST00000466776 PRAMEF22A3QJZ6 481 aa15.84■□□□□ 0.13
GTF3A-205ENST00000466776 NPR1P16066 1061 aa15.84■□□□□ 0.13
GTF3A-205ENST00000466776 HTRA3P83110 453 aa15.84■□□□□ 0.13
GTF3A-205ENST00000466776 DCTN1Q14203 1278 aa15.84■□□□□ 0.13
GTF3A-205ENST00000466776 CCDC93Q567U6 631 aa15.84■□□□□ 0.13
GTF3A-205ENST00000466776 JMYQ8N9B5 988 aa15.84■□□□□ 0.13
GTF3A-205ENST00000466776 NIP7Q9Y221 180 aaKnown RBP eCLIP15.84■□□□□ 0.13
GTF3A-205ENST00000466776 GTF2E1P29083 439 aaPredicted RBP15.83■□□□□ 0.12
GTF3A-205ENST00000466776 IQCA1LA6NCM1 817 aa15.81■□□□□ 0.12
GTF3A-205ENST00000466776 NYXQ9GZU5 481 aa15.81■□□□□ 0.12
GTF3A-205ENST00000466776 MAPK8IP3Q9UPT6 1336 aa15.81■□□□□ 0.12
GTF3A-205ENST00000466776 NBPF26B4DH59 902 aa15.8■□□□□ 0.12
GTF3A-205ENST00000466776 ALDH1B1P30837 517 aa15.8■□□□□ 0.12
GTF3A-205ENST00000466776 NBPF10Q6P3W6 841 aaKnown RBP15.8■□□□□ 0.12
GTF3A-205ENST00000466776 KIF6Q6ZMV9 814 aa15.8■□□□□ 0.12
GTF3A-205ENST00000466776 NBPF15Q8N660 670 aa15.8■□□□□ 0.12
GTF3A-205ENST00000466776 FAM177BA6PVY3 158 aa15.79■□□□□ 0.12
GTF3A-205ENST00000466776 RTKN2Q8IZC4 609 aa15.79■□□□□ 0.12
GTF3A-205ENST00000466776 KLRG2A4D1S0 409 aaPredicted RBP15.78■□□□□ 0.12
GTF3A-205ENST00000466776 POTECB2RU33 542 aa15.78■□□□□ 0.12
GTF3A-205ENST00000466776 ERVV-1B6SEH8 477 aa15.78■□□□□ 0.12
GTF3A-205ENST00000466776 FKBP4Q02790 459 aaKnown RBP eCLIP15.78■□□□□ 0.12
GTF3A-205ENST00000466776 CHADLQ6NUI6 762 aa15.78■□□□□ 0.12
GTF3A-205ENST00000466776 MIS18AQ9NYP9 233 aa15.78■□□□□ 0.12
GTF3A-205ENST00000466776 DDNO94850 711 aaPredicted RBP15.77■□□□□ 0.12
GTF3A-205ENST00000466776 NFE2L2Q16236 605 aa15.77■□□□□ 0.12
GTF3A-205ENST00000466776 POTEHQ6S545 545 aa15.77■□□□□ 0.12
GTF3A-205ENST00000466776 MAP3K15Q6ZN16 1313 aa15.76■□□□□ 0.11
GTF3A-205ENST00000466776 HLFQ16534 295 aa15.76■□□□□ 0.11
GTF3A-205ENST00000466776 NGEFQ8N5V2 710 aa15.76■□□□□ 0.11
GTF3A-205ENST00000466776 C7orf43Q8WVR3 580 aa15.76■□□□□ 0.11
GTF3A-205ENST00000466776 IBTKQ9P2D0 1353 aaPredicted RBP15.75■□□□□ 0.11
GTF3A-205ENST00000466776 ERBB4Q15303 1308 aa15.75■□□□□ 0.11
GTF3A-205ENST00000466776 EIF4A1P60842 406 aaKnown RBP15.75■□□□□ 0.11
GTF3A-205ENST00000466776 LDHDQ86WU2 507 aa15.75■□□□□ 0.11
GTF3A-205ENST00000466776 RPGRQ92834 1020 aaKnown RBP15.75■□□□□ 0.11
GTF3A-205ENST00000466776 L3MBTL3Q96JM7 780 aaPredicted RBP15.75■□□□□ 0.11
GTF3A-205ENST00000466776 PLEKHF1Q96S99 279 aa15.75■□□□□ 0.11
GTF3A-205ENST00000466776 CREBZFQ9NS37 354 aa15.75■□□□□ 0.11
GTF3A-205ENST00000466776 RRP7AQ9Y3A4 280 aaKnown RBP15.75■□□□□ 0.11
GTF3A-205ENST00000466776 RIC1Q4ADV7 1423 aa15.75■□□□□ 0.11
GTF3A-205ENST00000466776 ANKRD36CQ5JPF3 1778 aa15.75■□□□□ 0.11
GTF3A-205ENST00000466776 CC2D2BQ6DHV5 1058 aa15.74■□□□□ 0.11
GTF3A-205ENST00000466776 ZNF277Q9NRM2 450 aaPredicted RBP15.74■□□□□ 0.11
GTF3A-205ENST00000466776 MYL6BP14649 208 aa15.73■□□□□ 0.11
GTF3A-205ENST00000466776 IARSP41252 1262 aaKnown RBP15.73■□□□□ 0.11
GTF3A-205ENST00000466776 GRIPAP1Q4V328 841 aa15.73■□□□□ 0.11
GTF3A-205ENST00000466776 JDP2Q8WYK2 163 aa15.73■□□□□ 0.11
GTF3A-205ENST00000466776 LMOD3Q0VAK6 560 aa15.72■□□□□ 0.11
GTF3A-205ENST00000466776 CRY2Q49AN0 593 aa15.72■□□□□ 0.11
GTF3A-205ENST00000466776 NUTM1Q86Y26 1132 aa15.72■□□□□ 0.11
GTF3A-205ENST00000466776 TMX4Q9H1E5 349 aaPredicted RBP15.72■□□□□ 0.11
GTF3A-205ENST00000466776 TAF1DQ9H5J8 278 aaPredicted RBP15.72■□□□□ 0.11
GTF3A-205ENST00000466776 TSPYL4Q9UJ04 414 aa15.72■□□□□ 0.11
GTF3A-205ENST00000466776 HACL1Q9UJ83 578 aa15.72■□□□□ 0.11
GTF3A-205ENST00000466776 ABCC12Q96J65 1359 aa15.72■□□□□ 0.11
GTF3A-205ENST00000466776 PCNTO95613 3336 aa15.71■□□□□ 0.11
GTF3A-205ENST00000466776 HSPA1AP0DMV8 641 aaKnown RBP15.71■□□□□ 0.11
GTF3A-205ENST00000466776 HSPA1BP0DMV9 641 aaKnown RBP15.71■□□□□ 0.11
GTF3A-205ENST00000466776 PPP1R42Q7Z4L9 355 aa15.71■□□□□ 0.11
GTF3A-205ENST00000466776 SYNE4Q8N205 404 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms