RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 DGKZQ13574 1117 aa7.39□□□□□ -1.23
CDC42BPA-211ENST00000466538 C6orf118Q5T5N4 469 aa7.39□□□□□ -1.23
CDC42BPA-211ENST00000466538 PRICKLE2Q7Z3G6 844 aa7.39□□□□□ -1.23
CDC42BPA-211ENST00000466538 NPAS4Q8IUM7 802 aa7.39□□□□□ -1.23
CDC42BPA-211ENST00000466538 CRIPAKQ8N1N5 446 aa7.39□□□□□ -1.23
CDC42BPA-211ENST00000466538 SOS2Q07890 1332 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-211ENST00000466538 NRG2O14511 850 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-211ENST00000466538 ZBTB39O15060 712 aa7.38□□□□□ -1.23
CDC42BPA-211ENST00000466538 FZD6O60353 706 aa7.38□□□□□ -1.23
CDC42BPA-211ENST00000466538 MZF1P28698 734 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-211ENST00000466538 LAPTM4AQ15012 233 aa7.38□□□□□ -1.23
CDC42BPA-211ENST00000466538 PKDCCQ504Y2 493 aa7.38□□□□□ -1.23
CDC42BPA-211ENST00000466538 ZNF326Q5BKZ1 582 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-211ENST00000466538 KLK14Q9P0G3 267 aa7.38□□□□□ -1.23
CDC42BPA-211ENST00000466538 A0A1B0GTH6 734 aa7.37□□□□□ -1.23
CDC42BPA-211ENST00000466538 GFRA3O60609 400 aa7.37□□□□□ -1.23
CDC42BPA-211ENST00000466538 RPLP1P05386 114 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-211ENST00000466538 PHKA2P46019 1235 aa7.37□□□□□ -1.23
CDC42BPA-211ENST00000466538 IER5Q5VY09 327 aa7.37□□□□□ -1.23
CDC42BPA-211ENST00000466538 ETFBKMTQ8IXQ9 262 aa7.37□□□□□ -1.23
CDC42BPA-211ENST00000466538 RHPN1Q8TCX5 695 aa7.37□□□□□ -1.23
CDC42BPA-211ENST00000466538 DMRTB1Q96MA1 342 aa7.37□□□□□ -1.23
CDC42BPA-211ENST00000466538 BCL2L13Q9BXK5 485 aa7.37□□□□□ -1.23
CDC42BPA-211ENST00000466538 TIMMDC1Q9NPL8 285 aa7.37□□□□□ -1.23
CDC42BPA-211ENST00000466538 TGFBR3LH3BV60 316 aa7.36□□□□□ -1.23
CDC42BPA-211ENST00000466538 AXIN1O15169 862 aa7.36□□□□□ -1.23
CDC42BPA-211ENST00000466538 PCSK2P16519 638 aa7.36□□□□□ -1.23
CDC42BPA-211ENST00000466538 ZAP70P43403 619 aa7.36□□□□□ -1.23
CDC42BPA-211ENST00000466538 TMC7Q7Z402 723 aa7.36□□□□□ -1.23
CDC42BPA-211ENST00000466538 NEUROD4Q9HD90 331 aa7.36□□□□□ -1.23
CDC42BPA-211ENST00000466538 CCDC87Q9NVE4 849 aa7.36□□□□□ -1.23
CDC42BPA-211ENST00000466538 MICAL2O94851 1124 aa7.35□□□□□ -1.23
CDC42BPA-211ENST00000466538 FGD1P98174 961 aa7.35□□□□□ -1.23
CDC42BPA-211ENST00000466538 PLCB3Q01970 1234 aa7.35□□□□□ -1.23
CDC42BPA-211ENST00000466538 EHHADHQ08426 723 aa7.35□□□□□ -1.23
CDC42BPA-211ENST00000466538 BICDL1Q6ZP65 573 aa7.35□□□□□ -1.23
CDC42BPA-211ENST00000466538 TRIM46Q7Z4K8 759 aa7.35□□□□□ -1.23
CDC42BPA-211ENST00000466538 TREML1Q86YW5 311 aa7.35□□□□□ -1.23
CDC42BPA-211ENST00000466538 TMC1Q8TDI8 760 aa7.35□□□□□ -1.23
CDC42BPA-211ENST00000466538 SUSD3Q96L08 255 aa7.35□□□□□ -1.23
CDC42BPA-211ENST00000466538 FAM129BQ96TA1 746 aa7.35□□□□□ -1.23
CDC42BPA-211ENST00000466538 TREHO43280 583 aa7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 ZNF16P17020 682 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 MSX1P28360 303 aa7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 EAPPQ56P03 285 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 FAM26DQ5JW98 314 aa7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 TTC16Q8NEE8 873 aa7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 PIK3R5Q8WYR1 880 aa7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 ZNF428Q96B54 188 aa7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 ALKBH8Q96BT7 664 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 ZFP42Q96MM3 310 aa7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 ZIC5Q96T25 663 aa7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 BCS1LQ9Y276 419 aa7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 DYRK1BQ9Y463 629 aa7.34□□□□□ -1.23
CDC42BPA-211ENST00000466538 FIGNL2A6NMB9 653 aa7.33□□□□□ -1.24
CDC42BPA-211ENST00000466538 ATP4AP20648 1035 aa7.33□□□□□ -1.24
CDC42BPA-211ENST00000466538 DSC3Q14574 896 aa7.33□□□□□ -1.24
CDC42BPA-211ENST00000466538 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.33□□□□□ -1.248e-6■■□□□ 12.6
CDC42BPA-211ENST00000466538 ARSJQ5FYB0 599 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-211ENST00000466538 FBXO33Q7Z6M2 555 aa7.33□□□□□ -1.24
CDC42BPA-211ENST00000466538 ATCAYQ86WG3 371 aa7.33□□□□□ -1.24
CDC42BPA-211ENST00000466538 GJD3Q8N144 294 aa7.33□□□□□ -1.24
CDC42BPA-211ENST00000466538 BCL11AQ9H165 835 aa7.33□□□□□ -1.24
CDC42BPA-211ENST00000466538 C11orf16Q9NQ32 467 aa7.33□□□□□ -1.24
CDC42BPA-211ENST00000466538 DMGDHQ9UI17 866 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-211ENST00000466538 POLIQ9UNA4 740 aa7.33□□□□□ -1.24
CDC42BPA-211ENST00000466538 OPLAHO14841 1288 aa7.32□□□□□ -1.24
CDC42BPA-211ENST00000466538 IGHA2P01877 340 aa7.32□□□□□ -1.24
CDC42BPA-211ENST00000466538 F11P03951 625 aa7.32□□□□□ -1.24
CDC42BPA-211ENST00000466538 PDGFAP04085 211 aa7.32□□□□□ -1.24
CDC42BPA-211ENST00000466538 NEFLP07196 543 aa7.32□□□□□ -1.24
CDC42BPA-211ENST00000466538 RHOQP17081 205 aa7.32□□□□□ -1.24
CDC42BPA-211ENST00000466538 DNM1Q05193 864 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-211ENST00000466538 GIPC2Q8TF65 315 aa7.32□□□□□ -1.24
CDC42BPA-211ENST00000466538 EDEM1Q92611 657 aa7.32□□□□□ -1.24
CDC42BPA-211ENST00000466538 CRISPLD1Q9H336 500 aa7.32□□□□□ -1.24
CDC42BPA-211ENST00000466538 A0A1W2PNR3 127 aa7.31□□□□□ -1.24
CDC42BPA-211ENST00000466538 BMP1P13497 986 aa7.31□□□□□ -1.24
CDC42BPA-211ENST00000466538 FMR1Q06787 632 aaKnown RBP eCLIP7.31□□□□□ -1.24
CDC42BPA-211ENST00000466538 LBRQ14739 615 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-211ENST00000466538 NLRP8Q86W28 1048 aa7.31□□□□□ -1.24
CDC42BPA-211ENST00000466538 GPR152Q8TDT2 470 aa7.31□□□□□ -1.24
CDC42BPA-211ENST00000466538 FNDC3AQ9Y2H6 1198 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-211ENST00000466538 INPP5BP32019 993 aa7.3□□□□□ -1.24
CDC42BPA-211ENST00000466538 IDH3AP50213 366 aa7.3□□□□□ -1.24
CDC42BPA-211ENST00000466538 ARSDP51689 593 aa7.3□□□□□ -1.24
CDC42BPA-211ENST00000466538 XKR5Q6UX68 686 aa7.3□□□□□ -1.24
CDC42BPA-211ENST00000466538 BTLAQ7Z6A9 289 aa7.3□□□□□ -1.24
CDC42BPA-211ENST00000466538 PGBD3Q8N328 593 aa7.3□□□□□ -1.24
CDC42BPA-211ENST00000466538 ZNF280CQ8ND82 737 aa7.3□□□□□ -1.24
CDC42BPA-211ENST00000466538 NUDT16Q96DE0 195 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-211ENST00000466538 ATP13A2Q9NQ11 1180 aa7.3□□□□□ -1.24
CDC42BPA-211ENST00000466538 AAASQ9NRG9 546 aa7.3□□□□□ -1.24
CDC42BPA-211ENST00000466538 GJA3Q9Y6H8 435 aa7.3□□□□□ -1.24
CDC42BPA-211ENST00000466538 UNCXA6NJT0 531 aa7.29□□□□□ -1.24
CDC42BPA-211ENST00000466538 MAN1A2O60476 641 aa7.29□□□□□ -1.24
CDC42BPA-211ENST00000466538 EPB42P16452 691 aa7.29□□□□□ -1.24
CDC42BPA-211ENST00000466538 VAMP1P23763 118 aa7.29□□□□□ -1.24
CDC42BPA-211ENST00000466538 ITGAEP38570 1179 aa7.29□□□□□ -1.24
CDC42BPA-211ENST00000466538 SAMD5Q5TGI4 173 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms