RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 KRT85P78386 507 aa16.54■□□□□ 0.24
TGFBR3-204ENST00000465892 FLIIQ13045 1269 aa16.54■□□□□ 0.24
TGFBR3-204ENST00000465892 TAF3Q5VWG9 929 aa16.54■□□□□ 0.24
TGFBR3-204ENST00000465892 FILIP1Q7Z7B0 1213 aa16.54■□□□□ 0.24
TGFBR3-204ENST00000465892 KRT222Q8N1A0 295 aa16.54■□□□□ 0.24
TGFBR3-204ENST00000465892 PAXBP1Q9Y5B6 917 aa16.54■□□□□ 0.24
TGFBR3-204ENST00000465892 CPSF1Q10570 1443 aaKnown RBP16.54■□□□□ 0.24
TGFBR3-204ENST00000465892 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
TGFBR3-204ENST00000465892 LMTK2Q8IWU2 1503 aa16.54■□□□□ 0.24
TGFBR3-204ENST00000465892 FBXO38Q6PIJ6 1188 aa16.54■□□□□ 0.24
TGFBR3-204ENST00000465892 KIF20BQ96Q89 1820 aa16.54■□□□□ 0.24
TGFBR3-204ENST00000465892 NR1I2O75469 434 aa16.53■□□□□ 0.24
TGFBR3-204ENST00000465892 RAPGEF3O95398 923 aa16.53■□□□□ 0.24
TGFBR3-204ENST00000465892 STK3Q13188 491 aa16.53■□□□□ 0.24
TGFBR3-204ENST00000465892 GNAI3P08754 354 aa16.53■□□□□ 0.24
TGFBR3-204ENST00000465892 CEBPZQ03701 1054 aaKnown RBP16.53■□□□□ 0.24
TGFBR3-204ENST00000465892 PLA2G4DQ86XP0 818 aa16.52■□□□□ 0.24
TGFBR3-204ENST00000465892 PI4K2BQ8TCG2 481 aa16.52■□□□□ 0.24
TGFBR3-204ENST00000465892 FBXO31Q5XUX0 539 aaPredicted RBP16.52■□□□□ 0.24
TGFBR3-204ENST00000465892 PPP1R42Q7Z4L9 355 aa16.52■□□□□ 0.24
TGFBR3-204ENST00000465892 BICD2Q8TD16 824 aa16.52■□□□□ 0.24
TGFBR3-204ENST00000465892 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
TGFBR3-204ENST00000465892 RBM6P78332 1123 aaKnown RBP16.52■□□□□ 0.23
TGFBR3-204ENST00000465892 SPATA32Q96LK8 384 aa16.52■□□□□ 0.23
TGFBR3-204ENST00000465892 TPCN1Q9ULQ1 816 aa16.52■□□□□ 0.23
TGFBR3-204ENST00000465892 UBTFL1P0CB47 393 aaPredicted RBP16.51■□□□□ 0.23
TGFBR3-204ENST00000465892 USP44Q9H0E7 712 aa16.51■□□□□ 0.23
TGFBR3-204ENST00000465892 PTPN14Q15678 1187 aa16.51■□□□□ 0.23
TGFBR3-204ENST00000465892 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
TGFBR3-204ENST00000465892 CNTROBQ8N137 903 aa16.5■□□□□ 0.23
TGFBR3-204ENST00000465892 GTF3C6Q969F1 213 aa16.5■□□□□ 0.23
TGFBR3-204ENST00000465892 DDX11Q96FC9 970 aa16.5■□□□□ 0.23
TGFBR3-204ENST00000465892 CYP46A1Q9Y6A2 500 aa16.5■□□□□ 0.23
TGFBR3-204ENST00000465892 SIGLEC1Q9BZZ2 1709 aa16.5■□□□□ 0.23
TGFBR3-204ENST00000465892 SRGAP3O43295 1099 aa16.5■□□□□ 0.23
TGFBR3-204ENST00000465892 SKILP12757 684 aa16.5■□□□□ 0.23
TGFBR3-204ENST00000465892 LRRC8AQ8IWT6 810 aa16.5■□□□□ 0.23
TGFBR3-204ENST00000465892 ZNF397Q8NF99 534 aaPredicted RBP16.5■□□□□ 0.23
TGFBR3-204ENST00000465892 IL17RAQ96F46 866 aa16.5■□□□□ 0.23
TGFBR3-204ENST00000465892 ABCA9Q8IUA7 1624 aa16.5■□□□□ 0.23
TGFBR3-204ENST00000465892 MTHFSDQ2M296 383 aaKnown RBP16.49■□□□□ 0.23
TGFBR3-204ENST00000465892 ERCC4Q92889 916 aaPredicted RBP16.49■□□□□ 0.23
TGFBR3-204ENST00000465892 SYCP1Q15431 976 aa16.49■□□□□ 0.23
TGFBR3-204ENST00000465892 ARAP3Q8WWN8 1544 aa16.49■□□□□ 0.23
TGFBR3-204ENST00000465892 LARP1Q6PKG0 1096 aaKnown RBP16.49■□□□□ 0.23
TGFBR3-204ENST00000465892 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
TGFBR3-204ENST00000465892 SOS1Q07889 1333 aaPredicted RBP16.48■□□□□ 0.23
TGFBR3-204ENST00000465892 CCDC66A2RUB6 948 aa16.48■□□□□ 0.23
TGFBR3-204ENST00000465892 FOSBP53539 338 aa16.48■□□□□ 0.23
TGFBR3-204ENST00000465892 TIGD1Q96MW7 591 aa16.48■□□□□ 0.23
TGFBR3-204ENST00000465892 OS9Q13438 667 aaPredicted RBP16.48■□□□□ 0.23
TGFBR3-204ENST00000465892 TXNDC2Q86VQ3 553 aa16.48■□□□□ 0.23
TGFBR3-204ENST00000465892 LRRN4CLQ8ND94 238 aa16.48■□□□□ 0.23
TGFBR3-204ENST00000465892 GOLGA6L19H0YKK7 550 aa16.47■□□□□ 0.23
TGFBR3-204ENST00000465892 RAB11FIP3O75154 756 aa16.47■□□□□ 0.23
TGFBR3-204ENST00000465892 PHAXQ9H814 394 aaKnown RBP16.47■□□□□ 0.23
TGFBR3-204ENST00000465892 ZNF446Q9NWS9 450 aa16.47■□□□□ 0.23
TGFBR3-204ENST00000465892 ERCC6LQ2NKX8 1250 aa16.47■□□□□ 0.23
TGFBR3-204ENST00000465892 VPS53Q5VIR6 699 aa16.47■□□□□ 0.23
TGFBR3-204ENST00000465892 C11orf57Q6ZUT1 292 aaPredicted RBP16.47■□□□□ 0.23
TGFBR3-204ENST00000465892 NUDT16Q96DE0 195 aaKnown RBP16.47■□□□□ 0.23
TGFBR3-204ENST00000465892 PGBD1Q96JS3 809 aa16.47■□□□□ 0.23
TGFBR3-204ENST00000465892 TDRD7Q8NHU6 1098 aaKnown RBP16.46■□□□□ 0.23
TGFBR3-204ENST00000465892 LEO1Q8WVC0 666 aaPredicted RBP16.46■□□□□ 0.23
TGFBR3-204ENST00000465892 TAF6LQ9Y6J9 622 aa16.46■□□□□ 0.23
TGFBR3-204ENST00000465892 PPFIA3O75145 1194 aa16.46■□□□□ 0.23
TGFBR3-204ENST00000465892 CCDC69A6NI79 296 aa16.46■□□□□ 0.22
TGFBR3-204ENST00000465892 NBPF7P0C2Y1 421 aaPredicted RBP16.46■□□□□ 0.22
TGFBR3-204ENST00000465892 CLSTN2Q9H4D0 955 aa16.46■□□□□ 0.22
TGFBR3-204ENST00000465892 ASXL2Q76L83 1435 aa16.45■□□□□ 0.22
TGFBR3-204ENST00000465892 UHRF1BP1LA0JNW5 1464 aa16.45■□□□□ 0.22
TGFBR3-204ENST00000465892 CRB1P82279 1406 aa16.45■□□□□ 0.22
TGFBR3-204ENST00000465892 GORABQ5T7V8 394 aa16.45■□□□□ 0.22
TGFBR3-204ENST00000465892 ZSWIM6Q9HCJ5 1215 aa16.45■□□□□ 0.22
TGFBR3-204ENST00000465892 SLC52A1Q9NWF4 448 aa16.45■□□□□ 0.22
TGFBR3-204ENST00000465892 WASLO00401 505 aaPredicted RBP16.45■□□□□ 0.22
TGFBR3-204ENST00000465892 CHMP4AQ9BY43 222 aa16.45■□□□□ 0.22
TGFBR3-204ENST00000465892 CPS1P31327 1500 aa16.44■□□□□ 0.22
TGFBR3-204ENST00000465892 SSH3Q8TE77 659 aa16.44■□□□□ 0.22
TGFBR3-204ENST00000465892 SH2B1Q9NRF2 756 aaPredicted RBP16.44■□□□□ 0.22
TGFBR3-204ENST00000465892 FRMPD1Q5SYB0 1578 aa16.44■□□□□ 0.22
TGFBR3-204ENST00000465892 ATP7BP35670 1465 aa16.44■□□□□ 0.22
TGFBR3-204ENST00000465892 CAPN2P17655 700 aa16.44■□□□□ 0.22
TGFBR3-204ENST00000465892 ZBTB9Q96C00 473 aa16.44■□□□□ 0.22
TGFBR3-204ENST00000465892 ZSCAN31Q96LW9 406 aaPredicted RBP16.44■□□□□ 0.22
TGFBR3-204ENST00000465892 FAM227BQ96M60 508 aa16.44■□□□□ 0.22
TGFBR3-204ENST00000465892 PIK3C2BO00750 1634 aa16.44■□□□□ 0.22
TGFBR3-204ENST00000465892 TUBGCP6Q96RT7 1819 aa16.44■□□□□ 0.22
TGFBR3-204ENST00000465892 EDC4Q6P2E9 1401 aaKnown RBP16.44■□□□□ 0.22
TGFBR3-204ENST00000465892 BECN2A8MW95 431 aa16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 ZKSCAN1P17029 563 aaPredicted RBP16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 EIF2S2P20042 333 aaKnown RBP16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 CCDC30Q5VVM6 783 aa16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 NOL10Q9BSC4 688 aaKnown RBP16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 FTOQ9C0B1 505 aaKnown RBP eCLIP16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 DDX19AQ9NUU7 478 aaKnown RBP16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 RBM8AQ9Y5S9 174 aaKnown RBP16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 MYO5BQ9ULV0 1848 aa16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 MAP3K19Q56UN5 1328 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms