RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 SALL2Q9Y467 1007 aaPredicted RBP13□□□□□ -0.33
CTNNB1-211ENST00000465552 KRT24Q2M2I5 525 aa12.99□□□□□ -0.33
CTNNB1-211ENST00000465552 TBC1D2BQ9UPU7 963 aa12.99□□□□□ -0.33
CTNNB1-211ENST00000465552 EIF5P55010 431 aaKnown RBP12.98□□□□□ -0.33
CTNNB1-211ENST00000465552 NLGN1Q8N2Q7 840 aa12.98□□□□□ -0.33
CTNNB1-211ENST00000465552 NECTIN2Q92692 538 aa12.98□□□□□ -0.33
CTNNB1-211ENST00000465552 NARFQ9UHQ1 456 aa12.98□□□□□ -0.33
CTNNB1-211ENST00000465552 C10orf71Q711Q0 1435 aa12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 TNRC6CQ9HCJ0 1690 aaKnown RBP12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 NBPF26B4DH59 902 aa12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 GIGYF1O75420 1035 aaPredicted RBP12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 IL6STP40189 918 aaPredicted RBP12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 DDR1Q08345 913 aa12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 NBPF10Q6P3W6 841 aaKnown RBP12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 NPM2Q86SE8 214 aaKnown RBP12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 NGEFQ8N5V2 710 aa12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 NBPF15Q8N660 670 aa12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 BCL2L12Q9HB09 334 aa12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
CTNNB1-211ENST00000465552 MYL6BP14649 208 aa12.96□□□□□ -0.33
CTNNB1-211ENST00000465552 EIF2S2P20042 333 aaKnown RBP12.96□□□□□ -0.33
CTNNB1-211ENST00000465552 DZIP3Q86Y13 1208 aaKnown RBP12.96□□□□□ -0.33
CTNNB1-211ENST00000465552 PXDNLA1KZ92 1463 aa12.96□□□□□ -0.34
CTNNB1-211ENST00000465552 A0A087WZG4 1122 aa12.95□□□□□ -0.34
CTNNB1-211ENST00000465552 ANXA1P04083 346 aa12.95□□□□□ -0.34
CTNNB1-211ENST00000465552 MBIPQ9NS73 344 aa12.95□□□□□ -0.34
CTNNB1-211ENST00000465552 GOLGB1Q14789 3259 aaKnown RBP12.95□□□□□ -0.34
CTNNB1-211ENST00000465552 SBF1O95248 1867 aa12.95□□□□□ -0.34
CTNNB1-211ENST00000465552 CARMIL3Q8ND23 1372 aa12.94□□□□□ -0.34
CTNNB1-211ENST00000465552 TAF1P21675 1872 aa12.94□□□□□ -0.34
CTNNB1-211ENST00000465552 POLRMTO00411 1230 aaKnown RBP12.94□□□□□ -0.34
CTNNB1-211ENST00000465552 CHL1O00533 1208 aa12.94□□□□□ -0.34
CTNNB1-211ENST00000465552 NFIXQ14938 502 aa12.94□□□□□ -0.34
CTNNB1-211ENST00000465552 TBC1D9BQ66K14 1250 aa12.94□□□□□ -0.34
CTNNB1-211ENST00000465552 UTRNP46939 3433 aa12.94□□□□□ -0.34
CTNNB1-211ENST00000465552 CAMTA2O94983 1202 aa12.93□□□□□ -0.34
CTNNB1-211ENST00000465552 EVX2Q03828 476 aa12.93□□□□□ -0.34
CTNNB1-211ENST00000465552 GPR162Q16538 588 aa12.93□□□□□ -0.34
CTNNB1-211ENST00000465552 CFAP44Q96MT7 982 aa12.93□□□□□ -0.34
CTNNB1-211ENST00000465552 BABAM1Q9NWV8 329 aa12.93□□□□□ -0.34
CTNNB1-211ENST00000465552 CD2APQ9Y5K6 639 aa12.93□□□□□ -0.34
CTNNB1-211ENST00000465552 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
CTNNB1-211ENST00000465552 SPEF2Q9C093 1822 aa12.92□□□□□ -0.34
CTNNB1-211ENST00000465552 MYH3P11055 1940 aa12.92□□□□□ -0.34
CTNNB1-211ENST00000465552 ELL2O00472 640 aaPredicted RBP12.92□□□□□ -0.34
CTNNB1-211ENST00000465552 TM4SF1P30408 202 aa12.92□□□□□ -0.34
CTNNB1-211ENST00000465552 GNAI1P63096 354 aa12.92□□□□□ -0.34
CTNNB1-211ENST00000465552 PROSER3Q2NL68 480 aa12.92□□□□□ -0.34
CTNNB1-211ENST00000465552 DIEXFQ68CQ4 756 aaKnown RBP12.92□□□□□ -0.34
CTNNB1-211ENST00000465552 WWC1Q8IX03 1113 aa12.92□□□□□ -0.34
CTNNB1-211ENST00000465552 CCDC24Q8N4L8 307 aa12.92□□□□□ -0.34
CTNNB1-211ENST00000465552 TSR2Q969E8 191 aaKnown RBP12.92□□□□□ -0.34
CTNNB1-211ENST00000465552 IFT57Q9NWB7 429 aa12.92□□□□□ -0.34
CTNNB1-211ENST00000465552 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
CTNNB1-211ENST00000465552 CALD1Q05682 793 aaKnown RBP12.91□□□□□ -0.34
CTNNB1-211ENST00000465552 TTLL7Q6ZT98 887 aa12.91□□□□□ -0.34
CTNNB1-211ENST00000465552 ZBTB3Q9H5J0 574 aa12.91□□□□□ -0.34
CTNNB1-211ENST00000465552 TIAM2Q8IVF5 1701 aa12.91□□□□□ -0.34
CTNNB1-211ENST00000465552 FAM177BA6PVY3 158 aa12.9□□□□□ -0.34
CTNNB1-211ENST00000465552 SERPINB2P05120 415 aa12.9□□□□□ -0.34
CTNNB1-211ENST00000465552 ZNF853P0CG23 659 aa12.9□□□□□ -0.34
CTNNB1-211ENST00000465552 YBX3P16989 372 aaKnown RBP eCLIP12.9□□□□□ -0.346e-13■■■□□ 16.8
CTNNB1-211ENST00000465552 HLFQ16534 295 aa12.9□□□□□ -0.34
CTNNB1-211ENST00000465552 HDGFL1Q5TGJ6 251 aa12.9□□□□□ -0.34
CTNNB1-211ENST00000465552 DICER1Q9UPY3 1922 aaKnown RBP12.9□□□□□ -0.35
CTNNB1-211ENST00000465552 FER1L6Q2WGJ9 1857 aa12.89□□□□□ -0.35
CTNNB1-211ENST00000465552 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
CTNNB1-211ENST00000465552 NPHP1O15259 732 aa12.89□□□□□ -0.35
CTNNB1-211ENST00000465552 DUSP27Q5VZP5 1158 aa12.89□□□□□ -0.35
CTNNB1-211ENST00000465552 KIF6Q6ZMV9 814 aa12.89□□□□□ -0.35
CTNNB1-211ENST00000465552 CHPF2Q9P2E5 772 aa12.89□□□□□ -0.35
CTNNB1-211ENST00000465552 ZNF652Q9Y2D9 606 aa12.89□□□□□ -0.35
CTNNB1-211ENST00000465552 ERBB4Q15303 1308 aa12.88□□□□□ -0.35
CTNNB1-211ENST00000465552 DPEP1P16444 411 aa12.88□□□□□ -0.35
CTNNB1-211ENST00000465552 CHRNA5P30532 468 aa12.88□□□□□ -0.35
CTNNB1-211ENST00000465552 AIMP1Q12904 312 aaKnown RBP12.88□□□□□ -0.35
CTNNB1-211ENST00000465552 PDIA6Q15084 440 aa12.88□□□□□ -0.35
CTNNB1-211ENST00000465552 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
CTNNB1-211ENST00000465552 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
CTNNB1-211ENST00000465552 NIP7Q9Y221 180 aaKnown RBP eCLIP12.88□□□□□ -0.35
CTNNB1-211ENST00000465552 MAP3K15Q6ZN16 1313 aa12.88□□□□□ -0.35
CTNNB1-211ENST00000465552 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
CTNNB1-211ENST00000465552 GPTP24298 496 aa12.87□□□□□ -0.35
CTNNB1-211ENST00000465552 MIER1Q8N108 512 aa12.87□□□□□ -0.35
CTNNB1-211ENST00000465552 C8orf58Q8NAV2 365 aa12.87□□□□□ -0.35
CTNNB1-211ENST00000465552 FANCIQ9NVI1 1328 aa12.87□□□□□ -0.35
CTNNB1-211ENST00000465552 CCER2I3L3R5 266 aa12.86□□□□□ -0.35
CTNNB1-211ENST00000465552 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
CTNNB1-211ENST00000465552 PRR5LQ6MZQ0 368 aa12.86□□□□□ -0.35
CTNNB1-211ENST00000465552 LRP10Q7Z4F1 713 aa12.86□□□□□ -0.35
CTNNB1-211ENST00000465552 TSPYL6Q8N831 410 aa12.86□□□□□ -0.35
CTNNB1-211ENST00000465552 CNBD1Q8NA66 436 aa12.86□□□□□ -0.35
CTNNB1-211ENST00000465552 XAGE3Q8WTP9 111 aa12.86□□□□□ -0.35
CTNNB1-211ENST00000465552 ZNF428Q96B54 188 aa12.86□□□□□ -0.35
CTNNB1-211ENST00000465552 BCS1LQ9Y276 419 aa12.86□□□□□ -0.35
CTNNB1-211ENST00000465552 ATP10DQ9P241 1426 aa12.86□□□□□ -0.35
CTNNB1-211ENST00000465552 TCERG1O14776 1098 aaKnown RBP12.85□□□□□ -0.35
CTNNB1-211ENST00000465552 HOXB7P09629 217 aa12.85□□□□□ -0.35
CTNNB1-211ENST00000465552 TGFB2P61812 414 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms