RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 MCM10Q7L590 875 aa18.94■□□□□ 0.62
ATG4B-214ENST00000465399 ZNF219Q9P2Y4 722 aaPredicted RBP18.94■□□□□ 0.62
ATG4B-214ENST00000465399 ZNF652Q9Y2D9 606 aa18.94■□□□□ 0.62
ATG4B-214ENST00000465399 USP16Q9Y5T5 823 aa18.94■□□□□ 0.62
ATG4B-214ENST00000465399 C21orf2O43822 256 aa18.93■□□□□ 0.62
ATG4B-214ENST00000465399 PIP4K2AP48426 406 aaPredicted RBP18.92■□□□□ 0.62
ATG4B-214ENST00000465399 HTRA3P83110 453 aa18.92■□□□□ 0.62
ATG4B-214ENST00000465399 DPY19L2Q6NUT2 758 aa18.92■□□□□ 0.62
ATG4B-214ENST00000465399 CNKSR1Q969H4 720 aa18.92■□□□□ 0.62
ATG4B-214ENST00000465399 KLRG1Q96E93 195 aa18.92■□□□□ 0.62
ATG4B-214ENST00000465399 PRAMEF22A3QJZ6 481 aa18.91■□□□□ 0.62
ATG4B-214ENST00000465399 HTATSF1O43719 755 aaKnown RBP18.91■□□□□ 0.62
ATG4B-214ENST00000465399 STYK1Q6J9G0 422 aa18.91■□□□□ 0.62
ATG4B-214ENST00000465399 CLEC4GQ6UXB4 293 aa18.91■□□□□ 0.62
ATG4B-214ENST00000465399 KDM3BQ7LBC6 1761 aa18.91■□□□□ 0.62
ATG4B-214ENST00000465399 ERFEQ4G0M1 354 aa18.9■□□□□ 0.62
ATG4B-214ENST00000465399 SOGA3Q5TF21 947 aa18.9■□□□□ 0.62
ATG4B-214ENST00000465399 NBPF5PQ86XG9 351 aaPredicted RBP18.9■□□□□ 0.62
ATG4B-214ENST00000465399 MASTLQ96GX5 879 aa18.9■□□□□ 0.62
ATG4B-214ENST00000465399 TAOK3Q9H2K8 898 aa18.9■□□□□ 0.62
ATG4B-214ENST00000465399 LTBP3Q9NS15 1303 aa18.9■□□□□ 0.62
ATG4B-214ENST00000465399 NEFMP07197 916 aa18.89■□□□□ 0.61
ATG4B-214ENST00000465399 SRGNP10124 158 aa18.89■□□□□ 0.61
ATG4B-214ENST00000465399 DCTN1Q14203 1278 aa18.89■□□□□ 0.61
ATG4B-214ENST00000465399 PRPF40BQ6NWY9 871 aaKnown RBP18.89■□□□□ 0.61
ATG4B-214ENST00000465399 NUP98P52948 1817 aa18.88■□□□□ 0.61
ATG4B-214ENST00000465399 RGL2O15211 777 aa18.87■□□□□ 0.61
ATG4B-214ENST00000465399 TAF7Q15545 349 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-214ENST00000465399 JMYQ8N9B5 988 aa18.87■□□□□ 0.61
ATG4B-214ENST00000465399 NIP7Q9Y221 180 aaKnown RBP eCLIP18.86■□□□□ 0.61
ATG4B-214ENST00000465399 TPTE2Q6XPS3 522 aa18.85■□□□□ 0.61
ATG4B-214ENST00000465399 SCN4AP35499 1836 aa18.85■□□□□ 0.61
ATG4B-214ENST00000465399 POTECB2RU33 542 aa18.84■□□□□ 0.61
ATG4B-214ENST00000465399 NBPF26B4DH59 902 aa18.84■□□□□ 0.61
ATG4B-214ENST00000465399 NPR1P16066 1061 aa18.84■□□□□ 0.61
ATG4B-214ENST00000465399 NBPF10Q6P3W6 841 aaKnown RBP18.84■□□□□ 0.61
ATG4B-214ENST00000465399 NBPF15Q8N660 670 aa18.84■□□□□ 0.61
ATG4B-214ENST00000465399 CCDC93Q567U6 631 aa18.83■□□□□ 0.6
ATG4B-214ENST00000465399 PNISRQ8TF01 805 aaKnown RBP18.83■□□□□ 0.6
ATG4B-214ENST00000465399 MIS18AQ9NYP9 233 aa18.82■□□□□ 0.6
ATG4B-214ENST00000465399 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
ATG4B-214ENST00000465399 FAM177BA6PVY3 158 aa18.81■□□□□ 0.6
ATG4B-214ENST00000465399 GTF2E1P29083 439 aaPredicted RBP18.81■□□□□ 0.6
ATG4B-214ENST00000465399 PCNTO95613 3336 aa18.8■□□□□ 0.6
ATG4B-214ENST00000465399 DDNO94850 711 aaPredicted RBP18.8■□□□□ 0.6
ATG4B-214ENST00000465399 C7orf43Q8WVR3 580 aa18.8■□□□□ 0.6
ATG4B-214ENST00000465399 IQCA1LA6NCM1 817 aa18.79■□□□□ 0.6
ATG4B-214ENST00000465399 FKBP4Q02790 459 aaKnown RBP eCLIP18.79■□□□□ 0.6
ATG4B-214ENST00000465399 HLFQ16534 295 aa18.79■□□□□ 0.6
ATG4B-214ENST00000465399 PNNQ9H307 717 aaKnown RBP18.79■□□□□ 0.6
ATG4B-214ENST00000465399 MAPK8IP3Q9UPT6 1336 aa18.78■□□□□ 0.6
ATG4B-214ENST00000465399 ALDH1B1P30837 517 aa18.78■□□□□ 0.6
ATG4B-214ENST00000465399 CHADLQ6NUI6 762 aa18.78■□□□□ 0.6
ATG4B-214ENST00000465399 KIF6Q6ZMV9 814 aa18.78■□□□□ 0.6
ATG4B-214ENST00000465399 RTKN2Q8IZC4 609 aa18.78■□□□□ 0.6
ATG4B-214ENST00000465399 NGEFQ8N5V2 710 aa18.78■□□□□ 0.6
ATG4B-214ENST00000465399 NYXQ9GZU5 481 aa18.78■□□□□ 0.6
ATG4B-214ENST00000465399 ERVV-1B6SEH8 477 aa18.77■□□□□ 0.6
ATG4B-214ENST00000465399 NFE2L2Q16236 605 aa18.77■□□□□ 0.6
ATG4B-214ENST00000465399 PLEKHF1Q96S99 279 aa18.77■□□□□ 0.6
ATG4B-214ENST00000465399 MAP3K15Q6ZN16 1313 aa18.76■□□□□ 0.59
ATG4B-214ENST00000465399 EIF4A1P60842 406 aaKnown RBP18.76■□□□□ 0.59
ATG4B-214ENST00000465399 RRP7AQ9Y3A4 280 aaKnown RBP18.76■□□□□ 0.59
ATG4B-214ENST00000465399 L3MBTL3Q96JM7 780 aaPredicted RBP18.75■□□□□ 0.59
ATG4B-214ENST00000465399 THUMPD2Q9BTF0 503 aaKnown RBP18.75■□□□□ 0.59
ATG4B-214ENST00000465399 ZNF277Q9NRM2 450 aaPredicted RBP18.75■□□□□ 0.59
ATG4B-214ENST00000465399 ABCC12Q96J65 1359 aa18.74■□□□□ 0.59
ATG4B-214ENST00000465399 IBTKQ9P2D0 1353 aaPredicted RBP18.74■□□□□ 0.59
ATG4B-214ENST00000465399 POTEIP0CG38 1075 aa18.74■□□□□ 0.59
ATG4B-214ENST00000465399 POTEJP0CG39 1038 aa18.74■□□□□ 0.59
ATG4B-214ENST00000465399 MYL6BP14649 208 aa18.74■□□□□ 0.59
ATG4B-214ENST00000465399 COL13A1Q5TAT6 717 aaPredicted RBP18.74■□□□□ 0.59
ATG4B-214ENST00000465399 OLFM4Q6UX06 510 aa18.74■□□□□ 0.59
ATG4B-214ENST00000465399 RIC1Q4ADV7 1423 aa18.74■□□□□ 0.59
ATG4B-214ENST00000465399 LDHDQ86WU2 507 aa18.73■□□□□ 0.59
ATG4B-214ENST00000465399 NUTM1Q86Y26 1132 aa18.73■□□□□ 0.59
ATG4B-214ENST00000465399 CREBZFQ9NS37 354 aa18.73■□□□□ 0.59
ATG4B-214ENST00000465399 ERBB4Q15303 1308 aa18.73■□□□□ 0.59
ATG4B-214ENST00000465399 HSPA1AP0DMV8 641 aaKnown RBP18.72■□□□□ 0.59
ATG4B-214ENST00000465399 HSPA1BP0DMV9 641 aaKnown RBP18.72■□□□□ 0.59
ATG4B-214ENST00000465399 IARSP41252 1262 aaKnown RBP18.72■□□□□ 0.59
ATG4B-214ENST00000465399 CRY2Q49AN0 593 aa18.72■□□□□ 0.59
ATG4B-214ENST00000465399 TTLL7Q6ZT98 887 aa18.72■□□□□ 0.59
ATG4B-214ENST00000465399 RPGRQ92834 1020 aaKnown RBP18.72■□□□□ 0.59
ATG4B-214ENST00000465399 ZBTB3Q9H5J0 574 aa18.72■□□□□ 0.59
ATG4B-214ENST00000465399 TAF1DQ9H5J8 278 aaPredicted RBP18.72■□□□□ 0.59
ATG4B-214ENST00000465399 ANKRD36CQ5JPF3 1778 aa18.72■□□□□ 0.59
ATG4B-214ENST00000465399 ZNF541Q9H0D2 1346 aa18.72■□□□□ 0.59
ATG4B-214ENST00000465399 ADAMTSL1Q8N6G6 1762 aa18.71■□□□□ 0.59
ATG4B-214ENST00000465399 GPTP24298 496 aa18.71■□□□□ 0.59
ATG4B-214ENST00000465399 SYNE4Q8N205 404 aa18.71■□□□□ 0.59
ATG4B-214ENST00000465399 TSPYL4Q9UJ04 414 aa18.71■□□□□ 0.59
ATG4B-214ENST00000465399 EAPPQ56P03 285 aaPredicted RBP18.7■□□□□ 0.58
ATG4B-214ENST00000465399 CC2D2BQ6DHV5 1058 aa18.7■□□□□ 0.58
ATG4B-214ENST00000465399 SNED1Q8TER0 1413 aa18.7■□□□□ 0.58
ATG4B-214ENST00000465399 PSMD1Q99460 953 aa18.7■□□□□ 0.58
ATG4B-214ENST00000465399 HACL1Q9UJ83 578 aa18.7■□□□□ 0.58
ATG4B-214ENST00000465399 UBN2Q6ZU65 1347 aa18.7■□□□□ 0.58
ATG4B-214ENST00000465399 JDP2Q8WYK2 163 aa18.69■□□□□ 0.58
ATG4B-214ENST00000465399 FZD9O00144 591 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms