RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 CCDC93Q567U6 631 aa21.52■■□□□ 1.04
SNX12-203ENST00000465030 GPC2Q8N158 579 aa21.52■■□□□ 1.04
SNX12-203ENST00000465030 CCDC24Q8N4L8 307 aa21.52■■□□□ 1.04
SNX12-203ENST00000465030 KIF20BQ96Q89 1820 aa21.52■■□□□ 1.04
SNX12-203ENST00000465030 FZD9O00144 591 aa21.51■■□□□ 1.03
SNX12-203ENST00000465030 FKBP4Q02790 459 aaKnown RBP eCLIP21.51■■□□□ 1.03
SNX12-203ENST00000465030 ZNF530Q6P9A1 599 aaPredicted RBP21.51■■□□□ 1.03
SNX12-203ENST00000465030 C7orf43Q8WVR3 580 aa21.51■■□□□ 1.03
SNX12-203ENST00000465030 ZBTB1Q9Y2K1 713 aa21.51■■□□□ 1.03
SNX12-203ENST00000465030 TRPM7Q96QT4 1865 aa21.5■■□□□ 1.03
SNX12-203ENST00000465030 ST20-MTHFSA0A0A6YYL1 179 aa21.5■■□□□ 1.03
SNX12-203ENST00000465030 SRGNP10124 158 aa21.5■■□□□ 1.03
SNX12-203ENST00000465030 MTHFSP49914 203 aa21.5■■□□□ 1.03
SNX12-203ENST00000465030 HHIPL1Q96JK4 782 aa21.5■■□□□ 1.03
SNX12-203ENST00000465030 MKI67P46013 3256 aaKnown RBP21.49■■□□□ 1.03
SNX12-203ENST00000465030 ARFGEF2Q9Y6D5 1785 aa21.49■■□□□ 1.03
SNX12-203ENST00000465030 TBC1D9BQ66K14 1250 aa21.49■■□□□ 1.03
SNX12-203ENST00000465030 TESK2Q96S53 571 aa21.49■■□□□ 1.03
SNX12-203ENST00000465030 PLEKHO1Q53GL0 409 aaPredicted RBP21.48■■□□□ 1.03
SNX12-203ENST00000465030 MASTLQ96GX5 879 aa21.48■■□□□ 1.03
SNX12-203ENST00000465030 CACNA1SQ13698 1873 aa21.47■■□□□ 1.03
SNX12-203ENST00000465030 LMOD1P29536 600 aaPredicted RBP21.46■■□□□ 1.03
SNX12-203ENST00000465030 EIF4A2Q14240 407 aaKnown RBP21.45■■□□□ 1.02
SNX12-203ENST00000465030 CELF2O95319 508 aaKnown RBP21.44■■□□□ 1.02
SNX12-203ENST00000465030 IARSP41252 1262 aaKnown RBP21.44■■□□□ 1.02
SNX12-203ENST00000465030 NOGQ13253 232 aa21.44■■□□□ 1.02
SNX12-203ENST00000465030 AMOTQ4VCS5 1084 aa21.44■■□□□ 1.02
SNX12-203ENST00000465030 A0A0C4DFX4 3053 aa21.43■■□□□ 1.02
SNX12-203ENST00000465030 C1orf141Q5JVX7 400 aa21.43■■□□□ 1.02
SNX12-203ENST00000465030 USP50Q70EL3 339 aaPredicted RBP21.43■■□□□ 1.02
SNX12-203ENST00000465030 CNBD1Q8NA66 436 aa21.43■■□□□ 1.02
SNX12-203ENST00000465030 SIN3AQ96ST3 1273 aa21.43■■□□□ 1.02
SNX12-203ENST00000465030 ZIC5Q96T25 663 aa21.43■■□□□ 1.02
SNX12-203ENST00000465030 EPS15P42566 896 aa21.42■■□□□ 1.02
SNX12-203ENST00000465030 SCNN1DP51172 638 aa21.42■■□□□ 1.02
SNX12-203ENST00000465030 GJA3Q9Y6H8 435 aa21.42■■□□□ 1.02
SNX12-203ENST00000465030 SZT2Q5T011 3432 aa21.42■■□□□ 1.02
SNX12-203ENST00000465030 ST5P78524 1137 aa21.41■■□□□ 1.02
SNX12-203ENST00000465030 RTKN2Q8IZC4 609 aa21.41■■□□□ 1.02
SNX12-203ENST00000465030 SAGE1Q9NXZ1 904 aa21.41■■□□□ 1.02
SNX12-203ENST00000465030 NPHP1O15259 732 aa21.4■■□□□ 1.02
SNX12-203ENST00000465030 CANXP27824 592 aaKnown RBP21.4■■□□□ 1.02
SNX12-203ENST00000465030 FXR1P51114 621 aaKnown RBP eCLIP21.4■■□□□ 1.02
SNX12-203ENST00000465030 OLFM4Q6UX06 510 aa21.4■■□□□ 1.02
SNX12-203ENST00000465030 A0A087WZG4 1122 aa21.39■■□□□ 1.01
SNX12-203ENST00000465030 EIF5P55010 431 aaKnown RBP21.39■■□□□ 1.01
SNX12-203ENST00000465030 CTU1Q7Z7A3 348 aaKnown RBP21.39■■□□□ 1.01
SNX12-203ENST00000465030 JDP2Q8WYK2 163 aa21.39■■□□□ 1.01
SNX12-203ENST00000465030 POLKQ9UBT6 870 aa21.39■■□□□ 1.01
SNX12-203ENST00000465030 HPS5Q9UPZ3 1129 aa21.39■■□□□ 1.01
SNX12-203ENST00000465030 SCN7AQ01118 1682 aa21.39■■□□□ 1.01
SNX12-203ENST00000465030 BCORQ6W2J9 1755 aa21.38■■□□□ 1.01
SNX12-203ENST00000465030 SLC24A1O60721 1099 aa21.38■■□□□ 1.01
SNX12-203ENST00000465030 EIF6P56537 245 aaKnown RBP21.38■■□□□ 1.01
SNX12-203ENST00000465030 NEUROD1Q13562 356 aa21.37■■□□□ 1.01
SNX12-203ENST00000465030 SYNE4Q8N205 404 aa21.37■■□□□ 1.01
SNX12-203ENST00000465030 CUL9Q8IWT3 2517 aa21.36■■□□□ 1.01
SNX12-203ENST00000465030 SETDB2Q96T68 719 aa21.36■■□□□ 1.01
SNX12-203ENST00000465030 NPR1P16066 1061 aa21.35■■□□□ 1.01
SNX12-203ENST00000465030 SLC39A6Q13433 755 aa21.35■■□□□ 1.01
SNX12-203ENST00000465030 AKAP4Q5JQC9 854 aa21.35■■□□□ 1.01
SNX12-203ENST00000465030 SLC52A2Q9HAB3 445 aa21.35■■□□□ 1.01
SNX12-203ENST00000465030 VSIG10Q8N0Z9 540 aa21.34■■□□□ 1.01
SNX12-203ENST00000465030 CARD14Q9BXL6 1004 aa21.34■■□□□ 1.01
SNX12-203ENST00000465030 GLIS2Q9BZE0 524 aaPredicted RBP21.34■■□□□ 1.01
SNX12-203ENST00000465030 ZNF408Q9H9D4 720 aa21.34■■□□□ 1.01
SNX12-203ENST00000465030 COL4A5P29400 1685 aa21.34■■□□□ 1.01
SNX12-203ENST00000465030 DLL1O00548 723 aa21.33■■□□□ 1.01
SNX12-203ENST00000465030 PSMD1Q99460 953 aa21.32■■□□□ 1
SNX12-203ENST00000465030 RNF186Q9NXI6 227 aa21.32■■□□□ 1
SNX12-203ENST00000465030 TBC1D2BQ9UPU7 963 aa21.32■■□□□ 1
SNX12-203ENST00000465030 SCN11AQ9UI33 1791 aa21.32■■□□□ 1
SNX12-203ENST00000465030 SNED1Q8TER0 1413 aa21.31■■□□□ 1
SNX12-203ENST00000465030 TRPA1O75762 1119 aa21.31■■□□□ 1
SNX12-203ENST00000465030 ADARB2Q9NS39 739 aaKnown RBP21.31■■□□□ 1
SNX12-203ENST00000465030 HUNKP57058 714 aa21.3■■□□□ 1
SNX12-203ENST00000465030 MRC1P22897 1456 aa21.3■■□□□ 1
SNX12-203ENST00000465030 KLRG2A4D1S0 409 aaPredicted RBP21.29■■□□□ 1
SNX12-203ENST00000465030 FAM155AB1AL88 458 aaPredicted RBP21.29■■□□□ 1
SNX12-203ENST00000465030 STARD3NLO95772 234 aa21.29■■□□□ 1
SNX12-203ENST00000465030 PKN2Q16513 984 aaKnown RBP21.28■■□□□ 1
SNX12-203ENST00000465030 AEBP1Q8IUX7 1158 aa21.28■■□□□ 1
SNX12-203ENST00000465030 GPRC5DQ9NZD1 345 aa21.28■■□□□ 1
SNX12-203ENST00000465030 ZNF330Q9Y3S2 320 aaPredicted RBP21.28■■□□□ 1
SNX12-203ENST00000465030 KIF23Q02241 960 aaPredicted RBP21.27■■□□□ 1
SNX12-203ENST00000465030 PGAP2Q9UHJ9 254 aa21.27■■□□□ 1
SNX12-203ENST00000465030 CAMTA2O94983 1202 aa21.26■□□□□ 0.99
SNX12-203ENST00000465030 RGMBQ6NW40 437 aa21.25■□□□□ 0.99
SNX12-203ENST00000465030 NBPF5PQ86XG9 351 aaPredicted RBP21.25■□□□□ 0.99
SNX12-203ENST00000465030 LGR6Q9HBX8 967 aa21.25■□□□□ 0.99
SNX12-203ENST00000465030 LARGE2Q8N3Y3 721 aa21.24■□□□□ 0.99
SNX12-203ENST00000465030 HTTP42858 3142 aa21.24■□□□□ 0.99
SNX12-203ENST00000465030 BRCA2P51587 3418 aa21.23■□□□□ 0.99
SNX12-203ENST00000465030 ALDH1B1P30837 517 aa21.23■□□□□ 0.99
SNX12-203ENST00000465030 IL6STP40189 918 aaPredicted RBP21.23■□□□□ 0.99
SNX12-203ENST00000465030 CDC37L1Q7L3B6 337 aa21.23■□□□□ 0.99
SNX12-203ENST00000465030 ZC3H15Q8WU90 426 aaKnown RBP21.22■□□□□ 0.99
SNX12-203ENST00000465030 CCDC102AQ96A19 550 aa21.22■□□□□ 0.99
SNX12-203ENST00000465030 TNNT2P45379 298 aaPredicted RBP21.21■□□□□ 0.99
SNX12-203ENST00000465030 UBR2Q8IWV8 1755 aa21.2■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms