RNA–Protein interactions for RNA: ENST00000464368.1

TFRC-209, Transcript of transferrin receptor, humanhuman

TSL 4

Gene TFRC, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-209ENST00000464368 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
TFRC-209ENST00000464368 ST5P78524 1137 aa13.2□□□□□ -0.3
TFRC-209ENST00000464368 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
TFRC-209ENST00000464368 PDZRN3Q9UPQ7 1066 aa13.2□□□□□ -0.3
TFRC-209ENST00000464368 PCNTO95613 3336 aa13.2□□□□□ -0.3
TFRC-209ENST00000464368 LTBP3Q9NS15 1303 aa13.19□□□□□ -0.3
TFRC-209ENST00000464368 STYK1Q6J9G0 422 aa13.19□□□□□ -0.3
TFRC-209ENST00000464368 CHADLQ6NUI6 762 aa13.19□□□□□ -0.3
TFRC-209ENST00000464368 CNKSR1Q969H4 720 aa13.19□□□□□ -0.3
TFRC-209ENST00000464368 FER1L6Q2WGJ9 1857 aa13.19□□□□□ -0.3
TFRC-209ENST00000464368 SLX4Q8IY92 1834 aa13.18□□□□□ -0.3
TFRC-209ENST00000464368 BTBD11A6QL63 1104 aa13.18□□□□□ -0.3
TFRC-209ENST00000464368 MASTLQ96GX5 879 aa13.18□□□□□ -0.3
TFRC-209ENST00000464368 MKRN1Q9UHC7 482 aaKnown RBP13.18□□□□□ -0.3
TFRC-209ENST00000464368 USP16Q9Y5T5 823 aa13.18□□□□□ -0.3
TFRC-209ENST00000464368 NPC1L1Q9UHC9 1359 aa13.18□□□□□ -0.3
TFRC-209ENST00000464368 BCORQ6W2J9 1755 aa13.17□□□□□ -0.3
TFRC-209ENST00000464368 NBPF5PQ86XG9 351 aaPredicted RBP13.17□□□□□ -0.3
TFRC-209ENST00000464368 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
TFRC-209ENST00000464368 OLFM4Q6UX06 510 aa13.16□□□□□ -0.3
TFRC-209ENST00000464368 MCM10Q7L590 875 aa13.16□□□□□ -0.3
TFRC-209ENST00000464368 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
TFRC-209ENST00000464368 CACNA1SQ13698 1873 aa13.16□□□□□ -0.3
TFRC-209ENST00000464368 ZNF541Q9H0D2 1346 aa13.15□□□□□ -0.3
TFRC-209ENST00000464368 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
TFRC-209ENST00000464368 FAM177BA6PVY3 158 aa13.15□□□□□ -0.3
TFRC-209ENST00000464368 CCDC93Q567U6 631 aa13.15□□□□□ -0.3
TFRC-209ENST00000464368 SOGA3Q5TF21 947 aa13.15□□□□□ -0.3
TFRC-209ENST00000464368 C7orf43Q8WVR3 580 aa13.15□□□□□ -0.3
TFRC-209ENST00000464368 ZNF277Q9NRM2 450 aaPredicted RBP13.15□□□□□ -0.3
TFRC-209ENST00000464368 NBPF26B4DH59 902 aa13.14□□□□□ -0.31
TFRC-209ENST00000464368 SNRPA1P09661 255 aaKnown RBP13.14□□□□□ -0.31
TFRC-209ENST00000464368 DCTN1Q14203 1278 aa13.14□□□□□ -0.31
TFRC-209ENST00000464368 NBPF10Q6P3W6 841 aaKnown RBP13.14□□□□□ -0.31
TFRC-209ENST00000464368 NBPF15Q8N660 670 aa13.14□□□□□ -0.31
TFRC-209ENST00000464368 TAF1DQ9H5J8 278 aaPredicted RBP13.14□□□□□ -0.31
TFRC-209ENST00000464368 ARFGEF2Q9Y6D5 1785 aa13.13□□□□□ -0.31
TFRC-209ENST00000464368 IQCA1LA6NCM1 817 aa13.13□□□□□ -0.31
TFRC-209ENST00000464368 U2AF1L5P0DN76 240 aaPredicted RBP13.13□□□□□ -0.31
TFRC-209ENST00000464368 NPR1P16066 1061 aa13.13□□□□□ -0.31
TFRC-209ENST00000464368 U2AF1Q01081 240 aaKnown RBP eCLIP13.13□□□□□ -0.313e-18■■□□□ 13.7
TFRC-209ENST00000464368 CLEC4GQ6UXB4 293 aa13.13□□□□□ -0.31
TFRC-209ENST00000464368 L3MBTL3Q96JM7 780 aaPredicted RBP13.13□□□□□ -0.31
TFRC-209ENST00000464368 CFAP53Q96M91 514 aa13.13□□□□□ -0.31
TFRC-209ENST00000464368 NIP7Q9Y221 180 aaKnown RBP eCLIP13.13□□□□□ -0.31
TFRC-209ENST00000464368 ZNF652Q9Y2D9 606 aa13.13□□□□□ -0.31
TFRC-209ENST00000464368 PASKQ96RG2 1323 aa13.13□□□□□ -0.31
TFRC-209ENST00000464368 CNTNAP1P78357 1384 aa13.12□□□□□ -0.31
TFRC-209ENST00000464368 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
TFRC-209ENST00000464368 EAPPQ56P03 285 aaPredicted RBP13.12□□□□□ -0.31
TFRC-209ENST00000464368 LDHDQ86WU2 507 aa13.12□□□□□ -0.31
TFRC-209ENST00000464368 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
TFRC-209ENST00000464368 FOXN1O15353 648 aa13.11□□□□□ -0.31
TFRC-209ENST00000464368 TPTE2Q6XPS3 522 aa13.11□□□□□ -0.31
TFRC-209ENST00000464368 NUDCQ9Y266 331 aa13.11□□□□□ -0.31
TFRC-209ENST00000464368 ABCC12Q96J65 1359 aa13.1□□□□□ -0.31
TFRC-209ENST00000464368 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
TFRC-209ENST00000464368 HLFQ16534 295 aa13.1□□□□□ -0.31
TFRC-209ENST00000464368 POTEDQ86YR6 584 aa13.1□□□□□ -0.31
TFRC-209ENST00000464368 MIS18AQ9NYP9 233 aa13.1□□□□□ -0.31
TFRC-209ENST00000464368 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
TFRC-209ENST00000464368 RNF123Q5XPI4 1314 aa13.1□□□□□ -0.31
TFRC-209ENST00000464368 ITGBL1O95965 494 aaPredicted RBP13.09□□□□□ -0.31
TFRC-209ENST00000464368 PPP2R1AP30153 589 aa13.09□□□□□ -0.31
TFRC-209ENST00000464368 VEGFBP49765 207 aa13.09□□□□□ -0.31
TFRC-209ENST00000464368 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
TFRC-209ENST00000464368 HACL1Q9UJ83 578 aa13.09□□□□□ -0.31
TFRC-209ENST00000464368 TMEM88BA6NKF7 163 aa13.08□□□□□ -0.32
TFRC-209ENST00000464368 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.32
TFRC-209ENST00000464368 EPHX2P34913 555 aa13.08□□□□□ -0.32
TFRC-209ENST00000464368 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.32
TFRC-209ENST00000464368 MAP1SQ66K74 1059 aaPredicted RBP13.08□□□□□ -0.32
TFRC-209ENST00000464368 SLC51AQ86UW1 340 aa13.08□□□□□ -0.32
TFRC-209ENST00000464368 NUTM1Q86Y26 1132 aa13.08□□□□□ -0.32
TFRC-209ENST00000464368 RTKN2Q8IZC4 609 aa13.08□□□□□ -0.32
TFRC-209ENST00000464368 SYNE4Q8N205 404 aa13.08□□□□□ -0.32
TFRC-209ENST00000464368 SCN4AP35499 1836 aa13.08□□□□□ -0.32
TFRC-209ENST00000464368 ADAMTSL1Q8N6G6 1762 aa13.07□□□□□ -0.32
TFRC-209ENST00000464368 SNED1Q8TER0 1413 aa13.06□□□□□ -0.32
TFRC-209ENST00000464368 COL4A5P29400 1685 aa13.06□□□□□ -0.32
TFRC-209ENST00000464368 FZD9O00144 591 aa13.06□□□□□ -0.32
TFRC-209ENST00000464368 RGL2O15211 777 aa13.06□□□□□ -0.32
TFRC-209ENST00000464368 TAF7Q15545 349 aaPredicted RBP13.06□□□□□ -0.32
TFRC-209ENST00000464368 AIDAQ96BJ3 306 aa13.06□□□□□ -0.32
TFRC-209ENST00000464368 HTATSF1O43719 755 aaKnown RBP13.05□□□□□ -0.32
TFRC-209ENST00000464368 GPTP24298 496 aa13.05□□□□□ -0.32
TFRC-209ENST00000464368 ALDH1B1P30837 517 aa13.05□□□□□ -0.32
TFRC-209ENST00000464368 CRY2Q49AN0 593 aa13.05□□□□□ -0.32
TFRC-209ENST00000464368 TTLL7Q6ZT98 887 aa13.05□□□□□ -0.32
TFRC-209ENST00000464368 CNTROBQ8N137 903 aa13.05□□□□□ -0.32
TFRC-209ENST00000464368 GPC2Q8N158 579 aa13.05□□□□□ -0.32
TFRC-209ENST00000464368 GJA3Q9Y6H8 435 aa13.05□□□□□ -0.32
TFRC-209ENST00000464368 LAMB4A4D0S4 1761 aa13.04□□□□□ -0.32
TFRC-209ENST00000464368 TCERG1O14776 1098 aaKnown RBP13.04□□□□□ -0.32
TFRC-209ENST00000464368 CTCFP49711 727 aaPredicted RBP13.04□□□□□ -0.32
TFRC-209ENST00000464368 PNMA8AQ86V59 439 aaPredicted RBP13.04□□□□□ -0.32
TFRC-209ENST00000464368 JDP2Q8WYK2 163 aa13.04□□□□□ -0.32
TFRC-209ENST00000464368 PSMD1Q99460 953 aa13.04□□□□□ -0.32
TFRC-209ENST00000464368 THUMPD2Q9BTF0 503 aaKnown RBP13.04□□□□□ -0.32
TFRC-209ENST00000464368 ZBTB3Q9H5J0 574 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms