RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 DNM1Q05193 864 aaKnown RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 CAMK4Q16566 473 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 ZSCAN26Q16670 478 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 ARHGAP29Q52LW3 1261 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 SLC4A10Q6U841 1118 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 KRBA2Q6ZNG9 492 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 PAXIP1Q6ZW49 1069 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 LRRC8AQ8IWT6 810 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 CCDC191Q8NCU4 936 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 ERCC4Q92889 916 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 CHAMP1Q96JM3 812 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 C14orf93Q9H972 538 aaKnown RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 ARFGAP3Q9NP61 516 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 PDRG1Q9NUG6 133 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 IMPACTQ9P2X3 320 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 MED14O60244 1454 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 RAD50Q92878 1312 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 GOLGA6L9A6NEM1 432 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 CCDC69A6NI79 296 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 H3BQV1 296 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 ZBTB22O15209 634 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 KINO60870 393 aaKnown RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 ERLIN1O75477 346 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 GJB2P29033 226 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 STX1AQ16623 288 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 IFFO2Q5TF58 517 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 FBXO38Q6PIJ6 1188 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 GOLGA5Q8TBA6 731 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 KIF1BPQ96EK5 621 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 MYCBPQ99417 103 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 GEMIN8Q9NWZ8 242 aaKnown RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 DACT1Q9NYF0 836 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 FEZ2Q9UHY8 353 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 PHRF1Q9P1Y6 1649 aaKnown RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 AOX1Q06278 1338 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 ZSCAN12O43309 604 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 HSPA4P34932 840 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 RBM6P78332 1123 aaKnown RBP4.54□□□□□ -1.68
CCNL1-204ENST00000464316 RAD51AP2Q09MP3 1159 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 LRMPQ12912 555 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 CKAP2LQ8IYA6 745 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 MBIPQ9NS73 344 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 TRMT1Q9NXH9 659 aaKnown RBP4.54□□□□□ -1.68
CCNL1-204ENST00000464316 PSDA5PKW4 1024 aaPredicted RBP4.54□□□□□ -1.68
CCNL1-204ENST00000464316 POTEB2H3BUK9 544 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 RAB11FIP3O75154 756 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 SMC2O95347 1197 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 CASTP20810 708 aaKnown RBP4.54□□□□□ -1.68
CCNL1-204ENST00000464316 TTC31Q49AM3 519 aaPredicted RBP4.54□□□□□ -1.68
CCNL1-204ENST00000464316 C10orf67Q8IYJ2 551 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 CACTINQ8WUQ7 758 aaKnown RBP4.54□□□□□ -1.68
CCNL1-204ENST00000464316 GTF3C6Q969F1 213 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 FUCA2Q9BTY2 467 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 CLSTN2Q9H4D0 955 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.54□□□□□ -1.68
CCNL1-204ENST00000464316 WNK3Q9BYP7 1800 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 HIP1O00291 1037 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 TUBBP07437 444 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 VPS53Q5VIR6 699 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 ICE2Q659A1 982 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 SARM1Q6SZW1 724 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 CCDC91Q7Z6B0 441 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 PLA2G4DQ86XP0 818 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 CCDC83Q8IWF9 413 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 CCAR2Q8N163 923 aaKnown RBP4.54□□□□□ -1.68
CCNL1-204ENST00000464316 OTUD7AQ8TE49 926 aaPredicted RBP4.54□□□□□ -1.68
CCNL1-204ENST00000464316 PPM1EQ8WY54 764 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 EXOC4Q96A65 974 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 GBP3Q9H0R5 595 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.54□□□□□ -1.68
CCNL1-204ENST00000464316 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.54□□□□□ -1.689e-9■■□□□ 14.3
CCNL1-204ENST00000464316 MRVI1Q9Y6F6 885 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 MLH3Q9UHC1 1453 aa4.54□□□□□ -1.68
CCNL1-204ENST00000464316 STRCP1A6NGW2 1772 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 PNMA6AP0CW24 399 aaPredicted RBP4.53□□□□□ -1.68
CCNL1-204ENST00000464316 OS9Q13438 667 aaPredicted RBP4.53□□□□□ -1.68
CCNL1-204ENST00000464316 XRN1Q8IZH2 1706 aaKnown RBP4.53□□□□□ -1.68
CCNL1-204ENST00000464316 SDF4Q9BRK5 362 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 CABP2Q9NPB3 220 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 MKRN1Q9UHC7 482 aaKnown RBP4.53□□□□□ -1.68
CCNL1-204ENST00000464316 EFCAB8A8MWE9 144 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 CBFA2T2O43439 604 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 URI1O94763 535 aaPredicted RBP4.53□□□□□ -1.68
CCNL1-204ENST00000464316 LMAN1P49257 510 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 AK2P54819 239 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 ERCC6LQ2NKX8 1250 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 TSPYL6Q8N831 410 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 ZNF396Q96N95 335 aaPredicted RBP4.53□□□□□ -1.68
CCNL1-204ENST00000464316 TM6SF1Q9BZW5 370 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 DNAJC25Q9H1X3 360 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 ZSCAN16Q9H4T2 348 aaPredicted RBP4.53□□□□□ -1.68
CCNL1-204ENST00000464316 MTMR6Q9Y217 621 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 MYO1CO00159 1063 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 SLC4A2P04920 1241 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 HMOX1P09601 288 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 CCDC158Q5M9N0 1113 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 GORABQ5T7V8 394 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 FBXO18Q8NFZ0 1043 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 IL17RAQ96F46 866 aa4.53□□□□□ -1.68
CCNL1-204ENST00000464316 DDX11Q96FC9 970 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms