RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 CARMIL3Q8ND23 1372 aa17.34■□□□□ 0.37
LRRC47-202ENST00000462356 SETDB2Q96T68 719 aa17.34■□□□□ 0.37
LRRC47-202ENST00000462356 TGFB2P61812 414 aa17.33■□□□□ 0.36
LRRC47-202ENST00000462356 CCDC27Q2M243 656 aa17.33■□□□□ 0.36
LRRC47-202ENST00000462356 C8orf58Q8NAV2 365 aa17.33■□□□□ 0.36
LRRC47-202ENST00000462356 CHPF2Q9P2E5 772 aa17.33■□□□□ 0.36
LRRC47-202ENST00000462356 KCNA3P22001 575 aa17.32■□□□□ 0.36
LRRC47-202ENST00000462356 HDGFL1Q5TGJ6 251 aa17.32■□□□□ 0.36
LRRC47-202ENST00000462356 DIEXFQ68CQ4 756 aaKnown RBP17.32■□□□□ 0.36
LRRC47-202ENST00000462356 KIF6Q6ZMV9 814 aa17.32■□□□□ 0.36
LRRC47-202ENST00000462356 LRP10Q7Z4F1 713 aa17.32■□□□□ 0.36
LRRC47-202ENST00000462356 TSPYL6Q8N831 410 aa17.32■□□□□ 0.36
LRRC47-202ENST00000462356 NIP7Q9Y221 180 aaKnown RBP eCLIP17.32■□□□□ 0.36
LRRC47-202ENST00000462356 BCS1LQ9Y276 419 aa17.32■□□□□ 0.36
LRRC47-202ENST00000462356 ZNF652Q9Y2D9 606 aa17.32■□□□□ 0.36
LRRC47-202ENST00000462356 NRXN2Q9P2S2 1712 aa17.32■□□□□ 0.36
LRRC47-202ENST00000462356 ERBB4Q15303 1308 aa17.31■□□□□ 0.36
LRRC47-202ENST00000462356 MAP3K15Q6ZN16 1313 aa17.31■□□□□ 0.36
LRRC47-202ENST00000462356 NPHP1O15259 732 aa17.31■□□□□ 0.36
LRRC47-202ENST00000462356 GPTP24298 496 aa17.31■□□□□ 0.36
LRRC47-202ENST00000462356 PRR5LQ6MZQ0 368 aa17.31■□□□□ 0.36
LRRC47-202ENST00000462356 CLEC4GQ6UXB4 293 aa17.31■□□□□ 0.36
LRRC47-202ENST00000462356 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
LRRC47-202ENST00000462356 XAGE3Q8WTP9 111 aa17.31■□□□□ 0.36
LRRC47-202ENST00000462356 YY1P25490 414 aa17.3■□□□□ 0.36
LRRC47-202ENST00000462356 MIER1Q8N108 512 aa17.3■□□□□ 0.36
LRRC47-202ENST00000462356 DDX21Q9NR30 783 aaKnown RBP eCLIP17.3■□□□□ 0.36
LRRC47-202ENST00000462356 NUP98P52948 1817 aa17.29■□□□□ 0.36
LRRC47-202ENST00000462356 TCERG1O14776 1098 aaKnown RBP17.29■□□□□ 0.36
LRRC47-202ENST00000462356 NBPF5PQ86XG9 351 aaPredicted RBP17.29■□□□□ 0.36
LRRC47-202ENST00000462356 CNBD1Q8NA66 436 aa17.29■□□□□ 0.36
LRRC47-202ENST00000462356 ZNF428Q96B54 188 aa17.29■□□□□ 0.36
LRRC47-202ENST00000462356 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
LRRC47-202ENST00000462356 ERVV-1B6SEH8 477 aa17.28■□□□□ 0.36
LRRC47-202ENST00000462356 C2CD5Q86YS7 1000 aa17.28■□□□□ 0.36
LRRC47-202ENST00000462356 ANKRD31Q8N7Z5 1873 aa17.27■□□□□ 0.36
LRRC47-202ENST00000462356 GRIN3BO60391 1043 aa17.27■□□□□ 0.36
LRRC47-202ENST00000462356 HOXB7P09629 217 aa17.27■□□□□ 0.36
LRRC47-202ENST00000462356 PIM2Q9P1W9 311 aa17.27■□□□□ 0.36
LRRC47-202ENST00000462356 CCER2I3L3R5 266 aa17.26■□□□□ 0.35
LRRC47-202ENST00000462356 GIGYF2Q6Y7W6 1299 aaKnown RBP17.26■□□□□ 0.35
LRRC47-202ENST00000462356 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
LRRC47-202ENST00000462356 PHAXQ9H814 394 aaKnown RBP17.26■□□□□ 0.35
LRRC47-202ENST00000462356 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
LRRC47-202ENST00000462356 IL16Q14005 1332 aa17.25■□□□□ 0.35
LRRC47-202ENST00000462356 UBN2Q6ZU65 1347 aa17.25■□□□□ 0.35
LRRC47-202ENST00000462356 FANCIQ9NVI1 1328 aa17.25■□□□□ 0.35
LRRC47-202ENST00000462356 ST5P78524 1137 aa17.25■□□□□ 0.35
LRRC47-202ENST00000462356 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
LRRC47-202ENST00000462356 NUTM1Q86Y26 1132 aa17.25■□□□□ 0.35
LRRC47-202ENST00000462356 BRIP1Q9BX63 1249 aa17.25■□□□□ 0.35
LRRC47-202ENST00000462356 BRCA1P38398 1863 aaKnown RBP17.24■□□□□ 0.35
LRRC47-202ENST00000462356 H0YIN7 160 aa17.24■□□□□ 0.35
LRRC47-202ENST00000462356 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
LRRC47-202ENST00000462356 SUSD4Q5VX71 490 aa17.24■□□□□ 0.35
LRRC47-202ENST00000462356 TPTE2Q6XPS3 522 aa17.24■□□□□ 0.35
LRRC47-202ENST00000462356 ZNF34Q8IZ26 560 aa17.24■□□□□ 0.35
LRRC47-202ENST00000462356 ZNF622Q969S3 477 aaKnown RBP eCLIP17.24■□□□□ 0.35
LRRC47-202ENST00000462356 CHD4Q14839 1912 aa17.23■□□□□ 0.35
LRRC47-202ENST00000462356 EXOSC9Q06265 439 aaKnown RBP17.23■□□□□ 0.35
LRRC47-202ENST00000462356 TWISTNBQ3B726 338 aaPredicted RBP17.23■□□□□ 0.35
LRRC47-202ENST00000462356 DALRD3Q5D0E6 543 aaKnown RBP17.23■□□□□ 0.35
LRRC47-202ENST00000462356 ARHGAP27Q6ZUM4 889 aa17.23■□□□□ 0.35
LRRC47-202ENST00000462356 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
LRRC47-202ENST00000462356 ATP10DQ9P241 1426 aa17.22■□□□□ 0.35
LRRC47-202ENST00000462356 RGL2O15211 777 aa17.22■□□□□ 0.35
LRRC47-202ENST00000462356 PDE6BP35913 854 aa17.22■□□□□ 0.35
LRRC47-202ENST00000462356 ERFEQ4G0M1 354 aa17.22■□□□□ 0.35
LRRC47-202ENST00000462356 HYPKQ9NX55 129 aa17.22■□□□□ 0.35
LRRC47-202ENST00000462356 COL11A2P13942 1736 aaPredicted RBP17.21■□□□□ 0.35
LRRC47-202ENST00000462356 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.35
LRRC47-202ENST00000462356 ANKRD13DQ6ZTN6 518 aa17.21■□□□□ 0.35
LRRC47-202ENST00000462356 ABCC12Q96J65 1359 aa17.2■□□□□ 0.34
LRRC47-202ENST00000462356 ATP5J2-PTCD1G3V325 749 aa17.2■□□□□ 0.34
LRRC47-202ENST00000462356 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
LRRC47-202ENST00000462356 TCIRG1Q13488 830 aa17.2■□□□□ 0.34
LRRC47-202ENST00000462356 TTLL6Q8N841 843 aa17.2■□□□□ 0.34
LRRC47-202ENST00000462356 PLBD2Q8NHP8 589 aa17.2■□□□□ 0.34
LRRC47-202ENST00000462356 NTSR2O95665 410 aa17.19■□□□□ 0.34
LRRC47-202ENST00000462356 RIC3Q7Z5B4 369 aa17.19■□□□□ 0.34
LRRC47-202ENST00000462356 SYNE4Q8N205 404 aa17.19■□□□□ 0.34
LRRC47-202ENST00000462356 NYXQ9GZU5 481 aa17.19■□□□□ 0.34
LRRC47-202ENST00000462356 DLEC1Q9Y238 1755 aa17.19■□□□□ 0.34
LRRC47-202ENST00000462356 ZNF521Q96K83 1311 aa17.19■□□□□ 0.34
LRRC47-202ENST00000462356 VAMP4O75379 141 aa17.18■□□□□ 0.34
LRRC47-202ENST00000462356 SRGNP10124 158 aa17.18■□□□□ 0.34
LRRC47-202ENST00000462356 G2E3Q7L622 706 aa17.18■□□□□ 0.34
LRRC47-202ENST00000462356 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
LRRC47-202ENST00000462356 CACNA1SQ13698 1873 aa17.18■□□□□ 0.34
LRRC47-202ENST00000462356 GOLGB1Q14789 3259 aaKnown RBP17.17■□□□□ 0.34
LRRC47-202ENST00000462356 TNRC6CQ9HCJ0 1690 aaKnown RBP17.17■□□□□ 0.34
LRRC47-202ENST00000462356 ARFGEF1Q9Y6D6 1849 aa17.17■□□□□ 0.34
LRRC47-202ENST00000462356 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
LRRC47-202ENST00000462356 HSP90AB3PQ58FF7 597 aa17.17■□□□□ 0.34
LRRC47-202ENST00000462356 NLRP10Q86W26 655 aa17.17■□□□□ 0.34
LRRC47-202ENST00000462356 UTP14AQ9BVJ6 771 aaKnown RBP17.17■□□□□ 0.34
LRRC47-202ENST00000462356 STK31Q9BXU1 1019 aa17.17■□□□□ 0.34
LRRC47-202ENST00000462356 ANKRD36CQ5JPF3 1778 aa17.17■□□□□ 0.34
LRRC47-202ENST00000462356 C21orf2O43822 256 aa17.16■□□□□ 0.34
LRRC47-202ENST00000462356 PARP10Q53GL7 1025 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms