RNA–Protein interactions for RNA: ENST00000461903.1

HLA-A-205, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,352 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-205ENST00000461903 XAGE3Q8WTP9 111 aa28.64■■■□□ 2.18
HLA-A-205ENST00000461903 ARHGEF1Q92888 912 aaKnown RBP28.64■■■□□ 2.18
HLA-A-205ENST00000461903 COPS6Q7L5N1 327 aa28.63■■■□□ 2.17
HLA-A-205ENST00000461903 SCN7AQ01118 1682 aa28.63■■■□□ 2.17
HLA-A-205ENST00000461903 COL23A1Q86Y22 540 aaPredicted RBP28.62■■■□□ 2.17
HLA-A-205ENST00000461903 PHAXQ9H814 394 aaKnown RBP28.62■■■□□ 2.17
HLA-A-205ENST00000461903 TBC1D2BQ9UPU7 963 aa28.62■■■□□ 2.17
HLA-A-205ENST00000461903 BCORQ6W2J9 1755 aa28.62■■■□□ 2.17
HLA-A-205ENST00000461903 ZPR1O75312 459 aa28.62■■■□□ 2.17
HLA-A-205ENST00000461903 MRPL50Q8N5N7 158 aaKnown RBP28.62■■■□□ 2.17
HLA-A-205ENST00000461903 FLIIQ13045 1269 aa28.61■■■□□ 2.17
HLA-A-205ENST00000461903 TTLL7Q6ZT98 887 aa28.61■■■□□ 2.17
HLA-A-205ENST00000461903 USP42Q9H9J4 1324 aaKnown RBP28.6■■■□□ 2.17
HLA-A-205ENST00000461903 DDX58O95786 925 aaKnown RBP28.6■■■□□ 2.17
HLA-A-205ENST00000461903 NARFQ9UHQ1 456 aa28.6■■■□□ 2.17
HLA-A-205ENST00000461903 RCAN3Q9UKA8 241 aa28.6■■■□□ 2.17
HLA-A-205ENST00000461903 CHD4Q14839 1912 aa28.6■■■□□ 2.17
HLA-A-205ENST00000461903 G2E3Q7L622 706 aa28.59■■■□□ 2.17
HLA-A-205ENST00000461903 MAP3K15Q6ZN16 1313 aa28.58■■■□□ 2.17
HLA-A-205ENST00000461903 KIF16BQ96L93 1317 aa28.58■■■□□ 2.17
HLA-A-205ENST00000461903 FKBP5Q13451 457 aaPredicted RBP28.58■■■□□ 2.17
HLA-A-205ENST00000461903 ZBTB3Q9H5J0 574 aa28.58■■■□□ 2.17
HLA-A-205ENST00000461903 SRP68Q9UHB9 627 aaKnown RBP28.58■■■□□ 2.17
HLA-A-205ENST00000461903 USPL1Q5W0Q7 1092 aa28.57■■■□□ 2.16
HLA-A-205ENST00000461903 CAMTA2O94983 1202 aa28.56■■■□□ 2.16
HLA-A-205ENST00000461903 ZNF652Q9Y2D9 606 aa28.56■■■□□ 2.16
HLA-A-205ENST00000461903 ARFGEF2Q9Y6D5 1785 aa28.55■■■□□ 2.16
HLA-A-205ENST00000461903 BCAR3O75815 825 aa28.55■■■□□ 2.16
HLA-A-205ENST00000461903 ANKRD13DQ6ZTN6 518 aa28.55■■■□□ 2.16
HLA-A-205ENST00000461903 PTPRCP08575 1304 aa28.54■■■□□ 2.16
HLA-A-205ENST00000461903 ERVV-1B6SEH8 477 aa28.54■■■□□ 2.16
HLA-A-205ENST00000461903 BRPF1P55201 1214 aaPredicted RBP28.54■■■□□ 2.16
HLA-A-205ENST00000461903 RIC3Q7Z5B4 369 aa28.54■■■□□ 2.16
HLA-A-205ENST00000461903 PLBD2Q8NHP8 589 aa28.54■■■□□ 2.16
HLA-A-205ENST00000461903 SLC16A10Q8TF71 515 aa28.53■■■□□ 2.16
HLA-A-205ENST00000461903 NUP98P52948 1817 aa28.52■■■□□ 2.16
HLA-A-205ENST00000461903 RGL2O15211 777 aa28.51■■■□□ 2.16
HLA-A-205ENST00000461903 GYS1P13807 737 aa28.51■■■□□ 2.16
HLA-A-205ENST00000461903 FRAT1Q92837 279 aaPredicted RBP28.51■■■□□ 2.16
HLA-A-205ENST00000461903 COL24A1Q17RW2 1714 aa28.5■■■□□ 2.15
HLA-A-205ENST00000461903 KSR2Q6VAB6 950 aa28.5■■■□□ 2.15
HLA-A-205ENST00000461903 NOB1Q9ULX3 412 aaKnown RBP28.5■■■□□ 2.15
HLA-A-205ENST00000461903 PI4KAP2A4QPH2 592 aa28.5■■■□□ 2.15
HLA-A-205ENST00000461903 IPO8O15397 1037 aaKnown RBP28.5■■■□□ 2.15
HLA-A-205ENST00000461903 HSP90AB3PQ58FF7 597 aa28.5■■■□□ 2.15
HLA-A-205ENST00000461903 CLEC4GQ6UXB4 293 aa28.5■■■□□ 2.15
HLA-A-205ENST00000461903 GIGYF2Q6Y7W6 1299 aaKnown RBP28.5■■■□□ 2.15
HLA-A-205ENST00000461903 PI4KAP1Q8N8J0 262 aa28.5■■■□□ 2.15
HLA-A-205ENST00000461903 MAP3K2Q9Y2U5 619 aa28.5■■■□□ 2.15
HLA-A-205ENST00000461903 ADCY9O60503 1353 aa28.49■■■□□ 2.15
HLA-A-205ENST00000461903 ANKRD36CQ5JPF3 1778 aa28.49■■■□□ 2.15
HLA-A-205ENST00000461903 HLFQ16534 295 aa28.49■■■□□ 2.15
HLA-A-205ENST00000461903 BCL2L12Q9HB09 334 aa28.49■■■□□ 2.15
HLA-A-205ENST00000461903 FKBP8Q14318 412 aa28.48■■■□□ 2.15
HLA-A-205ENST00000461903 MSL1Q68DK7 614 aa28.48■■■□□ 2.15
HLA-A-205ENST00000461903 NLGN1Q8N2Q7 840 aa28.48■■■□□ 2.15
HLA-A-205ENST00000461903 API5Q9BZZ5 524 aaKnown RBP28.48■■■□□ 2.15
HLA-A-205ENST00000461903 DNAAF4Q8WXU2 420 aa28.47■■■□□ 2.15
HLA-A-205ENST00000461903 ATP10DQ9P241 1426 aa28.46■■■□□ 2.15
HLA-A-205ENST00000461903 NEXNQ0ZGT2 675 aa28.45■■■□□ 2.14
HLA-A-205ENST00000461903 ZKSCAN2Q63HK3 967 aa28.45■■■□□ 2.14
HLA-A-205ENST00000461903 BICDL1Q6ZP65 573 aa28.45■■■□□ 2.14
HLA-A-205ENST00000461903 ARHGAP45Q92619 1136 aa28.45■■■□□ 2.14
HLA-A-205ENST00000461903 F6X3S4 739 aa28.44■■■□□ 2.14
HLA-A-205ENST00000461903 CENPBP07199 599 aaPredicted RBP28.44■■■□□ 2.14
HLA-A-205ENST00000461903 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.44■■■□□ 2.14
HLA-A-205ENST00000461903 MYD88Q99836 296 aa28.44■■■□□ 2.14
HLA-A-205ENST00000461903 METTL22Q9BUU2 404 aaPredicted RBP28.44■■■□□ 2.14
HLA-A-205ENST00000461903 TCIRG1Q13488 830 aa28.43■■■□□ 2.14
HLA-A-205ENST00000461903 TBC1D9BQ66K14 1250 aa28.43■■■□□ 2.14
HLA-A-205ENST00000461903 NIP7Q9Y221 180 aaKnown RBP eCLIP28.43■■■□□ 2.14
HLA-A-205ENST00000461903 PXDNLA1KZ92 1463 aa28.42■■■□□ 2.14
HLA-A-205ENST00000461903 SLC4A10Q6U841 1118 aa28.42■■■□□ 2.14
HLA-A-205ENST00000461903 ATF7IPQ6VMQ6 1270 aa28.42■■■□□ 2.14
HLA-A-205ENST00000461903 AFDNP55196 1824 aaKnown RBP28.41■■■□□ 2.14
HLA-A-205ENST00000461903 GPTP24298 496 aa28.41■■■□□ 2.14
HLA-A-205ENST00000461903 POLD1P28340 1107 aa28.41■■■□□ 2.14
HLA-A-205ENST00000461903 SETDB2Q96T68 719 aa28.41■■■□□ 2.14
HLA-A-205ENST00000461903 C1QTNF8P60827 252 aa28.4■■■□□ 2.14
HLA-A-205ENST00000461903 NFIXQ14938 502 aa28.4■■■□□ 2.14
HLA-A-205ENST00000461903 GPR162Q16538 588 aa28.4■■■□□ 2.14
HLA-A-205ENST00000461903 CARMIL3Q8ND23 1372 aa28.4■■■□□ 2.14
HLA-A-205ENST00000461903 MMP10P09238 476 aa28.39■■■□□ 2.14
HLA-A-205ENST00000461903 TRIM27P14373 513 aa28.39■■■□□ 2.14
HLA-A-205ENST00000461903 ZNF34Q8IZ26 560 aa28.39■■■□□ 2.14
HLA-A-205ENST00000461903 GOLGB1Q14789 3259 aaKnown RBP28.39■■■□□ 2.13
HLA-A-205ENST00000461903 ATP5J2-PTCD1G3V325 749 aa28.38■■■□□ 2.13
HLA-A-205ENST00000461903 PARP10Q53GL7 1025 aa28.38■■■□□ 2.13
HLA-A-205ENST00000461903 FTSJ3Q8IY81 847 aaKnown RBP28.38■■■□□ 2.13
HLA-A-205ENST00000461903 N4BP2Q86UW6 1770 aaPredicted RBP28.37■■■□□ 2.13
HLA-A-205ENST00000461903 ISCA1Q9BUE6 129 aa28.37■■■□□ 2.13
HLA-A-205ENST00000461903 PARP3Q9Y6F1 533 aa28.37■■■□□ 2.13
HLA-A-205ENST00000461903 UBN2Q6ZU65 1347 aa28.37■■■□□ 2.13
HLA-A-205ENST00000461903 TM4SF1P30408 202 aa28.37■■■□□ 2.13
HLA-A-205ENST00000461903 LINS1Q8NG48 757 aa28.37■■■□□ 2.13
HLA-A-205ENST00000461903 ABCC4O15439 1325 aa28.36■■■□□ 2.13
HLA-A-205ENST00000461903 MS4A1P11836 297 aa28.36■■■□□ 2.13
HLA-A-205ENST00000461903 CLUAP1Q96AJ1 413 aa28.36■■■□□ 2.13
HLA-A-205ENST00000461903 SRCIN1Q9C0H9 1055 aa28.36■■■□□ 2.13
HLA-A-205ENST00000461903 NPHP1O15259 732 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms