RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 DDX10Q13206 875 aaKnown RBP12.13□□□□□ -0.47
BRCA1-207ENST00000461798 TBC1D9BQ66K14 1250 aa12.13□□□□□ -0.47
BRCA1-207ENST00000461798 CLEC4GQ6UXB4 293 aa12.13□□□□□ -0.47
BRCA1-207ENST00000461798 NPM2Q86SE8 214 aaKnown RBP12.13□□□□□ -0.47
BRCA1-207ENST00000461798 DCBLD2Q96PD2 775 aa12.13□□□□□ -0.47
BRCA1-207ENST00000461798 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
BRCA1-207ENST00000461798 FARP1Q9Y4F1 1045 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-207ENST00000461798 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
BRCA1-207ENST00000461798 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
BRCA1-207ENST00000461798 NBPF15Q8N660 670 aa12.12□□□□□ -0.47
BRCA1-207ENST00000461798 BRIP1Q9BX63 1249 aa12.12□□□□□ -0.47
BRCA1-207ENST00000461798 N4BP2Q86UW6 1770 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-207ENST00000461798 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
BRCA1-207ENST00000461798 H0YIN7 160 aa12.11□□□□□ -0.47
BRCA1-207ENST00000461798 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
BRCA1-207ENST00000461798 DZIP3Q86Y13 1208 aaKnown RBP12.11□□□□□ -0.47
BRCA1-207ENST00000461798 SETDB2Q96T68 719 aa12.11□□□□□ -0.47
BRCA1-207ENST00000461798 MIS18AQ9NYP9 233 aa12.11□□□□□ -0.47
BRCA1-207ENST00000461798 CARMIL3Q8ND23 1372 aa12.1□□□□□ -0.47
BRCA1-207ENST00000461798 PDE6BP35913 854 aa12.1□□□□□ -0.47
BRCA1-207ENST00000461798 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
BRCA1-207ENST00000461798 PRR5LQ6MZQ0 368 aa12.1□□□□□ -0.47
BRCA1-207ENST00000461798 C2CD5Q86YS7 1000 aa12.1□□□□□ -0.47
BRCA1-207ENST00000461798 TTLL6Q8N841 843 aa12.1□□□□□ -0.47
BRCA1-207ENST00000461798 OTUD5Q96G74 571 aa12.1□□□□□ -0.47
BRCA1-207ENST00000461798 ZNF330Q9Y3S2 320 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-207ENST00000461798 BRCA1P38398 1863 aaKnown RBP12.1□□□□□ -0.47
BRCA1-207ENST00000461798 MYBBP1AQ9BQG0 1328 aaKnown RBP12.1□□□□□ -0.47
BRCA1-207ENST00000461798 MAPK8IP3Q9UPT6 1336 aa12.1□□□□□ -0.47
BRCA1-207ENST00000461798 KIF3CO14782 793 aa12.09□□□□□ -0.47
BRCA1-207ENST00000461798 C9orf131Q5VYM1 1079 aa12.09□□□□□ -0.47
BRCA1-207ENST00000461798 BABAM1Q9NWV8 329 aa12.09□□□□□ -0.47
BRCA1-207ENST00000461798 POTEMA6NI47 508 aa12.08□□□□□ -0.48
BRCA1-207ENST00000461798 PIP4K2AP48426 406 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-207ENST00000461798 ZNF526Q8TF50 670 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-207ENST00000461798 THUMPD2Q9BTF0 503 aaKnown RBP12.08□□□□□ -0.48
BRCA1-207ENST00000461798 ZNF652Q9Y2D9 606 aa12.08□□□□□ -0.48
BRCA1-207ENST00000461798 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
BRCA1-207ENST00000461798 ARFGEF1Q9Y6D6 1849 aa12.07□□□□□ -0.48
BRCA1-207ENST00000461798 SENP3-EIF4A1A0A087X0R7 540 aa12.07□□□□□ -0.48
BRCA1-207ENST00000461798 TMPOP42166 694 aaKnown RBP12.07□□□□□ -0.48
BRCA1-207ENST00000461798 RIPK4P57078 832 aa12.07□□□□□ -0.48
BRCA1-207ENST00000461798 CNBD1Q8NA66 436 aa12.07□□□□□ -0.48
BRCA1-207ENST00000461798 KLRG2A4D1S0 409 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-207ENST00000461798 ERVV-1B6SEH8 477 aa12.06□□□□□ -0.48
BRCA1-207ENST00000461798 SCN7AQ01118 1682 aa12.06□□□□□ -0.48
BRCA1-207ENST00000461798 SRGNP10124 158 aa12.05□□□□□ -0.48
BRCA1-207ENST00000461798 ST5P78524 1137 aa12.05□□□□□ -0.48
BRCA1-207ENST00000461798 LMOD3Q0VAK6 560 aa12.05□□□□□ -0.48
BRCA1-207ENST00000461798 STYK1Q6J9G0 422 aa12.05□□□□□ -0.48
BRCA1-207ENST00000461798 TPTE2Q6XPS3 522 aa12.05□□□□□ -0.48
BRCA1-207ENST00000461798 CNKSR1Q969H4 720 aa12.05□□□□□ -0.48
BRCA1-207ENST00000461798 PRKRIP1Q9H875 184 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-207ENST00000461798 RNF181Q9P0P0 153 aa12.05□□□□□ -0.48
BRCA1-207ENST00000461798 ERBB4Q15303 1308 aa12.05□□□□□ -0.48
BRCA1-207ENST00000461798 ZC3H4Q9UPT8 1303 aaKnown RBP12.05□□□□□ -0.48
BRCA1-207ENST00000461798 TOMM70O94826 608 aa12.04□□□□□ -0.48
BRCA1-207ENST00000461798 LMNB1P20700 586 aa12.04□□□□□ -0.48
BRCA1-207ENST00000461798 PRELPP51888 382 aa12.04□□□□□ -0.48
BRCA1-207ENST00000461798 HLFQ16534 295 aa12.04□□□□□ -0.48
BRCA1-207ENST00000461798 NBPF5PQ86XG9 351 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-207ENST00000461798 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
BRCA1-207ENST00000461798 ZNF622Q969S3 477 aaKnown RBP eCLIP12.04□□□□□ -0.485e-8■■■□□ 17.3
BRCA1-207ENST00000461798 RUNDC1Q96C34 613 aa12.04□□□□□ -0.48
BRCA1-207ENST00000461798 TSPYL4Q9UJ04 414 aa12.04□□□□□ -0.48
BRCA1-207ENST00000461798 NIP7Q9Y221 180 aaKnown RBP eCLIP12.04□□□□□ -0.48
BRCA1-207ENST00000461798 POTEB2H3BUK9 544 aa12.03□□□□□ -0.48
BRCA1-207ENST00000461798 NFKBIEO00221 500 aa12.03□□□□□ -0.48
BRCA1-207ENST00000461798 HSPA6P17066 643 aa12.03□□□□□ -0.48
BRCA1-207ENST00000461798 ZNF579Q8NAF0 562 aaKnown RBP12.03□□□□□ -0.48
BRCA1-207ENST00000461798 MASTLQ96GX5 879 aa12.03□□□□□ -0.48
BRCA1-207ENST00000461798 NMRK2Q9NPI5 230 aa12.03□□□□□ -0.48
BRCA1-207ENST00000461798 ADAMTS8Q9UP79 889 aa12.03□□□□□ -0.48
BRCA1-207ENST00000461798 RRP7AQ9Y3A4 280 aaKnown RBP12.03□□□□□ -0.48
BRCA1-207ENST00000461798 KDM2BQ8NHM5 1336 aa12.03□□□□□ -0.48
BRCA1-207ENST00000461798 KDM3BQ7LBC6 1761 aa12.02□□□□□ -0.48
BRCA1-207ENST00000461798 DLG5Q8TDM6 1919 aa12.02□□□□□ -0.49
BRCA1-207ENST00000461798 CHL1O00533 1208 aa12.02□□□□□ -0.49
BRCA1-207ENST00000461798 NPHP1O15259 732 aa12.02□□□□□ -0.49
BRCA1-207ENST00000461798 RASSF7Q02833 373 aa12.02□□□□□ -0.49
BRCA1-207ENST00000461798 PDIA6Q15084 440 aa12.02□□□□□ -0.49
BRCA1-207ENST00000461798 POTEGQ6S5H5 508 aa12.02□□□□□ -0.49
BRCA1-207ENST00000461798 TTLL7Q6ZT98 887 aa12.02□□□□□ -0.49
BRCA1-207ENST00000461798 LRP10Q7Z4F1 713 aa12.02□□□□□ -0.49
BRCA1-207ENST00000461798 C7orf43Q8WVR3 580 aa12.02□□□□□ -0.49
BRCA1-207ENST00000461798 TRIM35Q9UPQ4 493 aa12.02□□□□□ -0.49
BRCA1-207ENST00000461798 MAP3K15Q6ZN16 1313 aa12.02□□□□□ -0.49
BRCA1-207ENST00000461798 LTBP3Q9NS15 1303 aa12.02□□□□□ -0.49
BRCA1-207ENST00000461798 BCORQ6W2J9 1755 aa12.01□□□□□ -0.49
BRCA1-207ENST00000461798 DLEC1Q9Y238 1755 aa12.01□□□□□ -0.49
BRCA1-207ENST00000461798 C21orf2O43822 256 aa12.01□□□□□ -0.49
BRCA1-207ENST00000461798 NPR1P16066 1061 aa12.01□□□□□ -0.49
BRCA1-207ENST00000461798 WDR43Q15061 677 aaKnown RBP eCLIP12.01□□□□□ -0.49
BRCA1-207ENST00000461798 SOGA3Q5TF21 947 aa12.01□□□□□ -0.49
BRCA1-207ENST00000461798 ANKRD31Q8N7Z5 1873 aa12□□□□□ -0.49
BRCA1-207ENST00000461798 MYL6BP14649 208 aa12□□□□□ -0.49
BRCA1-207ENST00000461798 PRPF40BQ6NWY9 871 aaKnown RBP12□□□□□ -0.49
BRCA1-207ENST00000461798 GIGYF2Q6Y7W6 1299 aaKnown RBP12□□□□□ -0.49
BRCA1-207ENST00000461798 KIF6Q6ZMV9 814 aa12□□□□□ -0.49
BRCA1-207ENST00000461798 CCDC146Q8IYE0 955 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 253.5 ms