RNA–Protein interactions for RNA: ENST00000461684.5

CHRD-210, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 677 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-210ENST00000461684 NUDCQ9Y266 331 aa21.25■□□□□ 0.99
CHRD-210ENST00000461684 PCNTO95613 3336 aa21.25■□□□□ 0.99
CHRD-210ENST00000461684 ZNF316A6NFI3 1004 aaPredicted RBP21.24■□□□□ 0.99
CHRD-210ENST00000461684 KCNQ3O43525 872 aa21.24■□□□□ 0.99
CHRD-210ENST00000461684 STYK1Q6J9G0 422 aa21.24■□□□□ 0.99
CHRD-210ENST00000461684 LTBP3Q9NS15 1303 aa21.24■□□□□ 0.99
CHRD-210ENST00000461684 POTECB2RU33 542 aa21.23■□□□□ 0.99
CHRD-210ENST00000461684 TAOK3Q9H2K8 898 aa21.23■□□□□ 0.99
CHRD-210ENST00000461684 USP16Q9Y5T5 823 aa21.23■□□□□ 0.99
CHRD-210ENST00000461684 SRGNP10124 158 aa21.22■□□□□ 0.99
CHRD-210ENST00000461684 SOGA3Q5TF21 947 aa21.22■□□□□ 0.99
CHRD-210ENST00000461684 RTF1Q92541 710 aaKnown RBP21.22■□□□□ 0.99
CHRD-210ENST00000461684 MASTLQ96GX5 879 aa21.22■□□□□ 0.99
CHRD-210ENST00000461684 CLEC4GQ6UXB4 293 aa21.21■□□□□ 0.99
CHRD-210ENST00000461684 ZNF652Q9Y2D9 606 aa21.21■□□□□ 0.99
CHRD-210ENST00000461684 SNRPA1P09661 255 aaKnown RBP21.2■□□□□ 0.98
CHRD-210ENST00000461684 COL13A1Q5TAT6 717 aaPredicted RBP21.2■□□□□ 0.98
CHRD-210ENST00000461684 PRPF40BQ6NWY9 871 aaKnown RBP21.2■□□□□ 0.98
CHRD-210ENST00000461684 U2AF1L5P0DN76 240 aaPredicted RBP21.19■□□□□ 0.98
CHRD-210ENST00000461684 PIP4K2AP48426 406 aaPredicted RBP21.19■□□□□ 0.98
CHRD-210ENST00000461684 U2AF1Q01081 240 aaKnown RBP eCLIP21.19■□□□□ 0.98
CHRD-210ENST00000461684 NBPF5PQ86XG9 351 aaPredicted RBP21.19■□□□□ 0.98
CHRD-210ENST00000461684 DDX10Q13206 875 aaKnown RBP21.18■□□□□ 0.98
CHRD-210ENST00000461684 MCM10Q7L590 875 aa21.18■□□□□ 0.98
CHRD-210ENST00000461684 SCN4AP35499 1836 aa21.18■□□□□ 0.98
CHRD-210ENST00000461684 PRAMEF22A3QJZ6 481 aa21.17■□□□□ 0.98
CHRD-210ENST00000461684 HTATSF1O43719 755 aaKnown RBP21.16■□□□□ 0.98
CHRD-210ENST00000461684 RGL2O15211 777 aa21.15■□□□□ 0.98
CHRD-210ENST00000461684 DDNO94850 711 aaPredicted RBP21.15■□□□□ 0.98
CHRD-210ENST00000461684 NPR1P16066 1061 aa21.15■□□□□ 0.98
CHRD-210ENST00000461684 PPP2R1AP30153 589 aa21.15■□□□□ 0.98
CHRD-210ENST00000461684 CHADLQ6NUI6 762 aa21.15■□□□□ 0.98
CHRD-210ENST00000461684 TPTE2Q6XPS3 522 aa21.15■□□□□ 0.98
CHRD-210ENST00000461684 DLG5Q8TDM6 1919 aa21.14■□□□□ 0.98
CHRD-210ENST00000461684 CCDC93Q567U6 631 aa21.14■□□□□ 0.97
CHRD-210ENST00000461684 NIP7Q9Y221 180 aaKnown RBP eCLIP21.14■□□□□ 0.97
CHRD-210ENST00000461684 LAMB4A4D0S4 1761 aa21.14■□□□□ 0.97
CHRD-210ENST00000461684 HSPA1AP0DMV8 641 aaKnown RBP21.13■□□□□ 0.97
CHRD-210ENST00000461684 HSPA1BP0DMV9 641 aaKnown RBP21.13■□□□□ 0.97
CHRD-210ENST00000461684 C7orf43Q8WVR3 580 aa21.13■□□□□ 0.97
CHRD-210ENST00000461684 KLRG2A4D1S0 409 aaPredicted RBP21.12■□□□□ 0.97
CHRD-210ENST00000461684 IQCA1LA6NCM1 817 aa21.12■□□□□ 0.97
CHRD-210ENST00000461684 NBPF26B4DH59 902 aa21.12■□□□□ 0.97
CHRD-210ENST00000461684 DCTN1Q14203 1278 aa21.12■□□□□ 0.97
CHRD-210ENST00000461684 TAF7Q15545 349 aaPredicted RBP21.12■□□□□ 0.97
CHRD-210ENST00000461684 NBPF10Q6P3W6 841 aaKnown RBP21.12■□□□□ 0.97
CHRD-210ENST00000461684 TNS4Q8IZW8 715 aa21.12■□□□□ 0.97
CHRD-210ENST00000461684 NBPF15Q8N660 670 aa21.12■□□□□ 0.97
CHRD-210ENST00000461684 NUP98P52948 1817 aa21.11■□□□□ 0.97
CHRD-210ENST00000461684 CREBZFQ9NS37 354 aa21.11■□□□□ 0.97
CHRD-210ENST00000461684 FKBP4Q02790 459 aaKnown RBP eCLIP21.1■□□□□ 0.97
CHRD-210ENST00000461684 POTEIP0CG38 1075 aa21.09■□□□□ 0.97
CHRD-210ENST00000461684 POTEJP0CG39 1038 aa21.09■□□□□ 0.97
CHRD-210ENST00000461684 GTF2E1P29083 439 aaPredicted RBP21.09■□□□□ 0.97
CHRD-210ENST00000461684 RTKN2Q8IZC4 609 aa21.09■□□□□ 0.97
CHRD-210ENST00000461684 L3MBTL3Q96JM7 780 aaPredicted RBP21.09■□□□□ 0.97
CHRD-210ENST00000461684 KDM3BQ7LBC6 1761 aa21.08■□□□□ 0.97
CHRD-210ENST00000461684 FAM177BA6PVY3 158 aa21.08■□□□□ 0.97
CHRD-210ENST00000461684 NEFMP07197 916 aa21.08■□□□□ 0.97
CHRD-210ENST00000461684 ALDH1B1P30837 517 aa21.08■□□□□ 0.97
CHRD-210ENST00000461684 LDHDQ86WU2 507 aa21.08■□□□□ 0.97
CHRD-210ENST00000461684 HLFQ16534 295 aa21.07■□□□□ 0.96
CHRD-210ENST00000461684 ZNF277Q9NRM2 450 aaPredicted RBP21.07■□□□□ 0.96
CHRD-210ENST00000461684 CAPN15O75808 1086 aa21.06■□□□□ 0.96
CHRD-210ENST00000461684 PNISRQ8TF01 805 aaKnown RBP21.06■□□□□ 0.96
CHRD-210ENST00000461684 TAF1DQ9H5J8 278 aaPredicted RBP21.06■□□□□ 0.96
CHRD-210ENST00000461684 MIS18AQ9NYP9 233 aa21.06■□□□□ 0.96
CHRD-210ENST00000461684 MKRN1Q9UHC7 482 aaKnown RBP21.06■□□□□ 0.96
CHRD-210ENST00000461684 NYXQ9GZU5 481 aa21.05■□□□□ 0.96
CHRD-210ENST00000461684 PASKQ96RG2 1323 aa21.04■□□□□ 0.96
CHRD-210ENST00000461684 OLFM4Q6UX06 510 aa21.04■□□□□ 0.96
CHRD-210ENST00000461684 ZNF541Q9H0D2 1346 aa21.04■□□□□ 0.96
CHRD-210ENST00000461684 ERVV-1B6SEH8 477 aa21.03■□□□□ 0.96
CHRD-210ENST00000461684 IARSP41252 1262 aaKnown RBP21.03■□□□□ 0.96
CHRD-210ENST00000461684 SYNE4Q8N205 404 aa21.03■□□□□ 0.96
CHRD-210ENST00000461684 NGEFQ8N5V2 710 aa21.03■□□□□ 0.96
CHRD-210ENST00000461684 HACL1Q9UJ83 578 aa21.03■□□□□ 0.96
CHRD-210ENST00000461684 EAPPQ56P03 285 aaPredicted RBP21.02■□□□□ 0.96
CHRD-210ENST00000461684 CNTNAP1P78357 1384 aa21.01■□□□□ 0.95
CHRD-210ENST00000461684 ADAMTSL1Q8N6G6 1762 aa21.01■□□□□ 0.95
CHRD-210ENST00000461684 CRY2Q49AN0 593 aa21.01■□□□□ 0.95
CHRD-210ENST00000461684 KIF6Q6ZMV9 814 aa21.01■□□□□ 0.95
CHRD-210ENST00000461684 CLEC11AQ9Y240 323 aa21.01■□□□□ 0.95
CHRD-210ENST00000461684 MAP3K15Q6ZN16 1313 aa21.01■□□□□ 0.95
CHRD-210ENST00000461684 FZD9O00144 591 aa21■□□□□ 0.95
CHRD-210ENST00000461684 EPHX2P34913 555 aa21■□□□□ 0.95
CHRD-210ENST00000461684 CC2D2BQ6DHV5 1058 aa21■□□□□ 0.95
CHRD-210ENST00000461684 PNMA8AQ86V59 439 aaPredicted RBP21■□□□□ 0.95
CHRD-210ENST00000461684 NUTM1Q86Y26 1132 aa21■□□□□ 0.95
CHRD-210ENST00000461684 JDP2Q8WYK2 163 aa21■□□□□ 0.95
CHRD-210ENST00000461684 PSMD1Q99460 953 aa21■□□□□ 0.95
CHRD-210ENST00000461684 RRP7AQ9Y3A4 280 aaKnown RBP21■□□□□ 0.95
CHRD-210ENST00000461684 ABCC12Q96J65 1359 aa20.99■□□□□ 0.95
CHRD-210ENST00000461684 TMEM88BA6NKF7 163 aa20.99■□□□□ 0.95
CHRD-210ENST00000461684 ITGBL1O95965 494 aaPredicted RBP20.99■□□□□ 0.95
CHRD-210ENST00000461684 EIF4A1P60842 406 aaKnown RBP20.99■□□□□ 0.95
CHRD-210ENST00000461684 GPC2Q8N158 579 aa20.99■□□□□ 0.95
CHRD-210ENST00000461684 RALBP1Q15311 655 aa20.98■□□□□ 0.95
CHRD-210ENST00000461684 RPGRQ92834 1020 aaKnown RBP20.98■□□□□ 0.95
CHRD-210ENST00000461684 PNNQ9H307 717 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms