RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 FKBP8Q14318 412 aa13.98□□□□□ -0.17
CCDC12-204ENST00000460035 SGIP1Q9BQI5 828 aa13.98□□□□□ -0.17
CCDC12-204ENST00000460035 PPP1R1BQ9UD71 204 aaPredicted RBP13.98□□□□□ -0.17
CCDC12-204ENST00000460035 VAMP4O75379 141 aa13.97□□□□□ -0.17
CCDC12-204ENST00000460035 PTGER2P43116 358 aa13.97□□□□□ -0.17
CCDC12-204ENST00000460035 KIF6Q6ZMV9 814 aa13.97□□□□□ -0.17
CCDC12-204ENST00000460035 TTLL7Q6ZT98 887 aa13.97□□□□□ -0.17
CCDC12-204ENST00000460035 STK31Q9BXU1 1019 aa13.97□□□□□ -0.17
CCDC12-204ENST00000460035 CAMTA2O94983 1202 aa13.96□□□□□ -0.17
CCDC12-204ENST00000460035 BICDL1Q6ZP65 573 aa13.96□□□□□ -0.17
CCDC12-204ENST00000460035 COPS6Q7L5N1 327 aa13.96□□□□□ -0.17
CCDC12-204ENST00000460035 XAGE3Q8WTP9 111 aa13.96□□□□□ -0.17
CCDC12-204ENST00000460035 BCL2L12Q9HB09 334 aa13.96□□□□□ -0.17
CCDC12-204ENST00000460035 HYPKQ9NX55 129 aa13.96□□□□□ -0.17
CCDC12-204ENST00000460035 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
CCDC12-204ENST00000460035 MMP10P09238 476 aa13.95□□□□□ -0.18
CCDC12-204ENST00000460035 YTHDC1Q96MU7 727 aaKnown RBP13.95□□□□□ -0.18
CCDC12-204ENST00000460035 ZBTB3Q9H5J0 574 aa13.95□□□□□ -0.18
CCDC12-204ENST00000460035 ANKRD31Q8N7Z5 1873 aa13.95□□□□□ -0.18
CCDC12-204ENST00000460035 N4BP2Q86UW6 1770 aaPredicted RBP13.94□□□□□ -0.18
CCDC12-204ENST00000460035 CLEC4GQ6UXB4 293 aa13.94□□□□□ -0.18
CCDC12-204ENST00000460035 KLHL34Q8N239 644 aa13.94□□□□□ -0.18
CCDC12-204ENST00000460035 PHAXQ9H814 394 aaKnown RBP13.94□□□□□ -0.18
CCDC12-204ENST00000460035 ZNF652Q9Y2D9 606 aa13.94□□□□□ -0.18
CCDC12-204ENST00000460035 PARP3Q9Y6F1 533 aa13.94□□□□□ -0.18
CCDC12-204ENST00000460035 MAP3K15Q6ZN16 1313 aa13.93□□□□□ -0.18
CCDC12-204ENST00000460035 BRCA1P38398 1863 aaKnown RBP13.93□□□□□ -0.18
CCDC12-204ENST00000460035 KIAA1551Q9HCM1 1747 aa13.93□□□□□ -0.18
CCDC12-204ENST00000460035 ERVV-1B6SEH8 477 aa13.93□□□□□ -0.18
CCDC12-204ENST00000460035 CT47B1P0C2W7 299 aaPredicted RBP13.93□□□□□ -0.18
CCDC12-204ENST00000460035 HLFQ16534 295 aa13.93□□□□□ -0.18
CCDC12-204ENST00000460035 TBC1D9BQ66K14 1250 aa13.93□□□□□ -0.18
CCDC12-204ENST00000460035 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
CCDC12-204ENST00000460035 DLEC1Q9Y238 1755 aa13.93□□□□□ -0.18
CCDC12-204ENST00000460035 ATP10DQ9P241 1426 aa13.92□□□□□ -0.18
CCDC12-204ENST00000460035 TM4SF1P30408 202 aa13.92□□□□□ -0.18
CCDC12-204ENST00000460035 NFIXQ14938 502 aa13.92□□□□□ -0.18
CCDC12-204ENST00000460035 ANKRD13DQ6ZTN6 518 aa13.92□□□□□ -0.18
CCDC12-204ENST00000460035 SETDB2Q96T68 719 aa13.92□□□□□ -0.18
CCDC12-204ENST00000460035 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
CCDC12-204ENST00000460035 MYH3P11055 1940 aa13.91□□□□□ -0.18
CCDC12-204ENST00000460035 LAMB2P55268 1798 aa13.91□□□□□ -0.18
CCDC12-204ENST00000460035 FAM177BA6PVY3 158 aa13.9□□□□□ -0.18
CCDC12-204ENST00000460035 NPHP1O15259 732 aa13.9□□□□□ -0.18
CCDC12-204ENST00000460035 DDX58O95786 925 aaKnown RBP13.9□□□□□ -0.18
CCDC12-204ENST00000460035 SERPINB2P05120 415 aa13.9□□□□□ -0.18
CCDC12-204ENST00000460035 DDR1Q08345 913 aa13.9□□□□□ -0.18
CCDC12-204ENST00000460035 GIGYF2Q6Y7W6 1299 aaKnown RBP13.9□□□□□ -0.18
CCDC12-204ENST00000460035 G2E3Q7L622 706 aa13.9□□□□□ -0.18
CCDC12-204ENST00000460035 PLBD2Q8NHP8 589 aa13.9□□□□□ -0.18
CCDC12-204ENST00000460035 NIP7Q9Y221 180 aaKnown RBP eCLIP13.9□□□□□ -0.18
CCDC12-204ENST00000460035 CARMIL3Q8ND23 1372 aa13.89□□□□□ -0.19
CCDC12-204ENST00000460035 POLRMTO00411 1230 aaKnown RBP13.89□□□□□ -0.19
CCDC12-204ENST00000460035 GPTP24298 496 aa13.89□□□□□ -0.19
CCDC12-204ENST00000460035 CACNA1SQ13698 1873 aa13.89□□□□□ -0.19
CCDC12-204ENST00000460035 HSP90AB3PQ58FF7 597 aa13.88□□□□□ -0.19
CCDC12-204ENST00000460035 FHDC1Q9C0D6 1143 aaPredicted RBP13.88□□□□□ -0.19
CCDC12-204ENST00000460035 C10orf71Q711Q0 1435 aa13.88□□□□□ -0.19
CCDC12-204ENST00000460035 COL11A2P13942 1736 aaPredicted RBP13.87□□□□□ -0.19
CCDC12-204ENST00000460035 DDX60Q8IY21 1712 aaKnown RBP13.87□□□□□ -0.19
CCDC12-204ENST00000460035 IBTKQ9P2D0 1353 aaPredicted RBP13.87□□□□□ -0.19
CCDC12-204ENST00000460035 GTF2E1P29083 439 aaPredicted RBP13.87□□□□□ -0.19
CCDC12-204ENST00000460035 FLIIQ13045 1269 aa13.87□□□□□ -0.19
CCDC12-204ENST00000460035 FKBP5Q13451 457 aaPredicted RBP13.87□□□□□ -0.19
CCDC12-204ENST00000460035 TCIRG1Q13488 830 aa13.87□□□□□ -0.19
CCDC12-204ENST00000460035 ALDH1L2Q3SY69 923 aa13.87□□□□□ -0.19
CCDC12-204ENST00000460035 KSR2Q6VAB6 950 aa13.87□□□□□ -0.19
CCDC12-204ENST00000460035 NBPF5PQ86XG9 351 aaPredicted RBP13.87□□□□□ -0.19
CCDC12-204ENST00000460035 SSH1Q8WYL5 1049 aa13.87□□□□□ -0.19
CCDC12-204ENST00000460035 BCL2L13Q9BXK5 485 aa13.87□□□□□ -0.19
CCDC12-204ENST00000460035 ARFGEF1Q9Y6D6 1849 aa13.86□□□□□ -0.19
CCDC12-204ENST00000460035 PI4KAP2A4QPH2 592 aa13.86□□□□□ -0.19
CCDC12-204ENST00000460035 ATP5J2-PTCD1G3V325 749 aa13.86□□□□□ -0.19
CCDC12-204ENST00000460035 TPTE2Q6XPS3 522 aa13.86□□□□□ -0.19
CCDC12-204ENST00000460035 ZNF34Q8IZ26 560 aa13.86□□□□□ -0.19
CCDC12-204ENST00000460035 CCDC24Q8N4L8 307 aa13.86□□□□□ -0.19
CCDC12-204ENST00000460035 MRPL50Q8N5N7 158 aaKnown RBP13.86□□□□□ -0.19
CCDC12-204ENST00000460035 PI4KAP1Q8N8J0 262 aa13.86□□□□□ -0.19
CCDC12-204ENST00000460035 SMC4Q9NTJ3 1288 aa13.86□□□□□ -0.19
CCDC12-204ENST00000460035 MAP3K2Q9Y2U5 619 aa13.86□□□□□ -0.19
CCDC12-204ENST00000460035 ADCY9O60503 1353 aa13.85□□□□□ -0.19
CCDC12-204ENST00000460035 MYD88Q99836 296 aa13.85□□□□□ -0.19
CCDC12-204ENST00000460035 SYT17Q9BSW7 474 aa13.85□□□□□ -0.19
CCDC12-204ENST00000460035 CD2APQ9Y5K6 639 aa13.85□□□□□ -0.19
CCDC12-204ENST00000460035 TNRC6CQ9HCJ0 1690 aaKnown RBP13.85□□□□□ -0.19
CCDC12-204ENST00000460035 RARSP54136 660 aaKnown RBP13.84□□□□□ -0.19
CCDC12-204ENST00000460035 BRPF1P55201 1214 aaPredicted RBP13.84□□□□□ -0.19
CCDC12-204ENST00000460035 PARP10Q53GL7 1025 aa13.84□□□□□ -0.19
CCDC12-204ENST00000460035 SUSD4Q5VX71 490 aa13.84□□□□□ -0.19
CCDC12-204ENST00000460035 PPP1R42Q7Z4L9 355 aa13.84□□□□□ -0.19
CCDC12-204ENST00000460035 CNBD1Q8NA66 436 aa13.84□□□□□ -0.19
CCDC12-204ENST00000460035 METTL22Q9BUU2 404 aaPredicted RBP13.84□□□□□ -0.19
CCDC12-204ENST00000460035 UBN2Q6ZU65 1347 aa13.84□□□□□ -0.19
CCDC12-204ENST00000460035 SRCAPQ6ZRS2 3230 aa13.83□□□□□ -0.19
CCDC12-204ENST00000460035 RIC1Q4ADV7 1423 aa13.83□□□□□ -0.2
CCDC12-204ENST00000460035 ST5P78524 1137 aa13.83□□□□□ -0.2
CCDC12-204ENST00000460035 NEXNQ0ZGT2 675 aa13.83□□□□□ -0.2
CCDC12-204ENST00000460035 TRIM28Q13263 835 aaKnown RBP13.83□□□□□ -0.2
CCDC12-204ENST00000460035 PRR5LQ6MZQ0 368 aa13.83□□□□□ -0.2
CCDC12-204ENST00000460035 NLRP10Q86W26 655 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms