RNA–Protein interactions for RNA: ENST00000459711.5

CHRD-207, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 503 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-207ENST00000459711 LDHDQ86WU2 507 aa26.92■■□□□ 1.9
CHRD-207ENST00000459711 IL17REQ8NFR9 667 aa26.92■■□□□ 1.9
CHRD-207ENST00000459711 MASTLQ96GX5 879 aa26.92■■□□□ 1.9
CHRD-207ENST00000459711 L3MBTL3Q96JM7 780 aaPredicted RBP26.92■■□□□ 1.9
CHRD-207ENST00000459711 PRDM10Q9NQV6 1147 aa26.92■■□□□ 1.9
CHRD-207ENST00000459711 NPHP1O15259 732 aa26.91■■□□□ 1.9
CHRD-207ENST00000459711 TAF1DQ9H5J8 278 aaPredicted RBP26.9■■□□□ 1.9
CHRD-207ENST00000459711 GNAT3A8MTJ3 354 aa26.89■■□□□ 1.9
CHRD-207ENST00000459711 A1BGP04217 495 aa26.89■■□□□ 1.9
CHRD-207ENST00000459711 NPM2Q86SE8 214 aaKnown RBP26.89■■□□□ 1.9
CHRD-207ENST00000459711 FMNL2Q96PY5 1086 aa26.89■■□□□ 1.9
CHRD-207ENST00000459711 GAS2L2Q8NHY3 880 aa26.88■■□□□ 1.89
CHRD-207ENST00000459711 C7orf43Q8WVR3 580 aa26.88■■□□□ 1.89
CHRD-207ENST00000459711 COL3A1P02461 1466 aaPredicted RBP26.87■■□□□ 1.89
CHRD-207ENST00000459711 CCDC93Q567U6 631 aa26.86■■□□□ 1.89
CHRD-207ENST00000459711 DZIP3Q86Y13 1208 aaKnown RBP26.86■■□□□ 1.89
CHRD-207ENST00000459711 TMEM88BA6NKF7 163 aa26.85■■□□□ 1.89
CHRD-207ENST00000459711 ITGBL1O95965 494 aaPredicted RBP26.85■■□□□ 1.89
CHRD-207ENST00000459711 CTCFP49711 727 aaPredicted RBP26.85■■□□□ 1.89
CHRD-207ENST00000459711 VEGFBP49765 207 aa26.85■■□□□ 1.89
CHRD-207ENST00000459711 CEMIPQ8WUJ3 1361 aa26.84■■□□□ 1.89
CHRD-207ENST00000459711 AIDAQ96BJ3 306 aa26.84■■□□□ 1.89
CHRD-207ENST00000459711 ADAMTSL1Q8N6G6 1762 aa26.84■■□□□ 1.89
CHRD-207ENST00000459711 ZNF541Q9H0D2 1346 aa26.83■■□□□ 1.89
CHRD-207ENST00000459711 PER1O15534 1290 aaPredicted RBP26.82■■□□□ 1.88
CHRD-207ENST00000459711 NPR1P16066 1061 aa26.82■■□□□ 1.88
CHRD-207ENST00000459711 FKBP4Q02790 459 aaKnown RBP eCLIP26.82■■□□□ 1.88
CHRD-207ENST00000459711 CLEC4GQ6UXB4 293 aa26.82■■□□□ 1.88
CHRD-207ENST00000459711 NBPF5PQ86XG9 351 aaPredicted RBP26.82■■□□□ 1.88
CHRD-207ENST00000459711 PCGF6Q9BYE7 350 aa26.82■■□□□ 1.88
CHRD-207ENST00000459711 KIF7Q2M1P5 1343 aa26.82■■□□□ 1.88
CHRD-207ENST00000459711 KCNQ3O43525 872 aa26.81■■□□□ 1.88
CHRD-207ENST00000459711 EAPPQ56P03 285 aaPredicted RBP26.81■■□□□ 1.88
CHRD-207ENST00000459711 CC2D1BQ5T0F9 858 aaKnown RBP26.81■■□□□ 1.88
CHRD-207ENST00000459711 WBP1LQ9NX94 342 aa26.81■■□□□ 1.88
CHRD-207ENST00000459711 HACL1Q9UJ83 578 aa26.81■■□□□ 1.88
CHRD-207ENST00000459711 KLRG2A4D1S0 409 aaPredicted RBP26.8■■□□□ 1.88
CHRD-207ENST00000459711 U2SURPO15042 1029 aaKnown RBP26.8■■□□□ 1.88
CHRD-207ENST00000459711 BTBD11A6QL63 1104 aa26.79■■□□□ 1.88
CHRD-207ENST00000459711 ZNF277Q9NRM2 450 aaPredicted RBP26.79■■□□□ 1.88
CHRD-207ENST00000459711 USP16Q9Y5T5 823 aa26.79■■□□□ 1.88
CHRD-207ENST00000459711 EPHX2P34913 555 aa26.78■■□□□ 1.88
CHRD-207ENST00000459711 PIP4K2AP48426 406 aaPredicted RBP26.78■■□□□ 1.88
CHRD-207ENST00000459711 ZNF652Q9Y2D9 606 aa26.78■■□□□ 1.88
CHRD-207ENST00000459711 CLEC11AQ9Y240 323 aa26.77■■□□□ 1.88
CHRD-207ENST00000459711 RASSF10A6NK89 507 aa26.76■■□□□ 1.87
CHRD-207ENST00000459711 LBX1P52954 281 aa26.76■■□□□ 1.87
CHRD-207ENST00000459711 OLFM4Q6UX06 510 aa26.76■■□□□ 1.87
CHRD-207ENST00000459711 RTKN2Q8IZC4 609 aa26.76■■□□□ 1.87
CHRD-207ENST00000459711 PNMA8AQ86V59 439 aaPredicted RBP26.75■■□□□ 1.87
CHRD-207ENST00000459711 RNF123Q5XPI4 1314 aa26.74■■□□□ 1.87
CHRD-207ENST00000459711 PRAMEF22A3QJZ6 481 aa26.74■■□□□ 1.87
CHRD-207ENST00000459711 FZD9O00144 591 aa26.74■■□□□ 1.87
CHRD-207ENST00000459711 RGL2O15211 777 aa26.74■■□□□ 1.87
CHRD-207ENST00000459711 TPTE2Q6XPS3 522 aa26.74■■□□□ 1.87
CHRD-207ENST00000459711 IARSP41252 1262 aaKnown RBP26.73■■□□□ 1.87
CHRD-207ENST00000459711 DEFB115Q30KQ5 88 aa26.73■■□□□ 1.87
CHRD-207ENST00000459711 CNTROBQ8N137 903 aa26.73■■□□□ 1.87
CHRD-207ENST00000459711 NPC1L1Q9UHC9 1359 aa26.72■■□□□ 1.87
CHRD-207ENST00000459711 HSPA8P11142 646 aaKnown RBP26.72■■□□□ 1.87
CHRD-207ENST00000459711 MAP1SQ66K74 1059 aaPredicted RBP26.72■■□□□ 1.87
CHRD-207ENST00000459711 PHACTR3Q96KR7 559 aa26.72■■□□□ 1.87
CHRD-207ENST00000459711 NIP7Q9Y221 180 aaKnown RBP eCLIP26.72■■□□□ 1.87
CHRD-207ENST00000459711 SNRPA1P09661 255 aaKnown RBP26.71■■□□□ 1.87
CHRD-207ENST00000459711 GPC2Q8N158 579 aa26.71■■□□□ 1.87
CHRD-207ENST00000459711 SNED1Q8TER0 1413 aa26.71■■□□□ 1.87
CHRD-207ENST00000459711 ALDH1B1P30837 517 aa26.7■■□□□ 1.86
CHRD-207ENST00000459711 SYNE4Q8N205 404 aa26.7■■□□□ 1.86
CHRD-207ENST00000459711 WDR33Q9C0J8 1336 aaKnown RBP26.69■■□□□ 1.86
CHRD-207ENST00000459711 PRKAR2BP31323 418 aa26.69■■□□□ 1.86
CHRD-207ENST00000459711 MAP2K1Q02750 393 aaPredicted RBP26.69■■□□□ 1.86
CHRD-207ENST00000459711 NBPF26B4DH59 902 aa26.68■■□□□ 1.86
CHRD-207ENST00000459711 NBPF10Q6P3W6 841 aaKnown RBP26.68■■□□□ 1.86
CHRD-207ENST00000459711 NBPF15Q8N660 670 aa26.68■■□□□ 1.86
CHRD-207ENST00000459711 ABHD8Q96I13 439 aa26.68■■□□□ 1.86
CHRD-207ENST00000459711 PSMD1Q99460 953 aa26.68■■□□□ 1.86
CHRD-207ENST00000459711 RSPH6AQ9H0K4 717 aa26.68■■□□□ 1.86
CHRD-207ENST00000459711 FAM177BA6PVY3 158 aa26.67■■□□□ 1.86
CHRD-207ENST00000459711 ABT1Q9ULW3 272 aaKnown RBP26.66■■□□□ 1.86
CHRD-207ENST00000459711 THSD7BQ9C0I4 1608 aa26.65■■□□□ 1.86
CHRD-207ENST00000459711 JDP2Q8WYK2 163 aa26.65■■□□□ 1.86
CHRD-207ENST00000459711 DDX21Q9NR30 783 aaKnown RBP eCLIP26.65■■□□□ 1.86
CHRD-207ENST00000459711 LTBP1Q14766 1721 aa26.65■■□□□ 1.86
CHRD-207ENST00000459711 COL4A5P29400 1685 aa26.64■■□□□ 1.86
CHRD-207ENST00000459711 HLFQ16534 295 aa26.64■■□□□ 1.86
CHRD-207ENST00000459711 CRY2Q49AN0 593 aa26.64■■□□□ 1.86
CHRD-207ENST00000459711 SLC34A2O95436 690 aa26.63■■□□□ 1.85
CHRD-207ENST00000459711 MCM10Q7L590 875 aa26.63■■□□□ 1.85
CHRD-207ENST00000459711 ABCC12Q96J65 1359 aa26.62■■□□□ 1.85
CHRD-207ENST00000459711 GTF2E1P29083 439 aaPredicted RBP26.62■■□□□ 1.85
CHRD-207ENST00000459711 EIF6P56537 245 aaKnown RBP26.62■■□□□ 1.85
CHRD-207ENST00000459711 CNGB1Q14028 1251 aaPredicted RBP26.62■■□□□ 1.85
CHRD-207ENST00000459711 CC2D2BQ6DHV5 1058 aa26.62■■□□□ 1.85
CHRD-207ENST00000459711 RTF1Q92541 710 aaKnown RBP26.62■■□□□ 1.85
CHRD-207ENST00000459711 GJA3Q9Y6H8 435 aa26.61■■□□□ 1.85
CHRD-207ENST00000459711 LMOD1P29536 600 aaPredicted RBP26.6■■□□□ 1.85
CHRD-207ENST00000459711 FAM161AQ3B820 660 aa26.6■■□□□ 1.85
CHRD-207ENST00000459711 LAMB4A4D0S4 1761 aa26.6■■□□□ 1.85
CHRD-207ENST00000459711 SCNN1DP51172 638 aa26.59■■□□□ 1.85
CHRD-207ENST00000459711 NYXQ9GZU5 481 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms