RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 XAGE3Q8WTP9 111 aa15.81■□□□□ 0.12
CNOT3-205ENST00000457463 ZBTB3Q9H5J0 574 aa15.81■□□□□ 0.12
CNOT3-205ENST00000457463 DDX21Q9NR30 783 aaKnown RBP eCLIP15.81■□□□□ 0.12
CNOT3-205ENST00000457463 PARP3Q9Y6F1 533 aa15.81■□□□□ 0.12
CNOT3-205ENST00000457463 GOLGA2Q08379 1002 aa15.8■□□□□ 0.12
CNOT3-205ENST00000457463 TWISTNBQ3B726 338 aaPredicted RBP15.8■□□□□ 0.12
CNOT3-205ENST00000457463 CCDC24Q8N4L8 307 aa15.8■□□□□ 0.12
CNOT3-205ENST00000457463 MAP3K15Q6ZN16 1313 aa15.79■□□□□ 0.12
CNOT3-205ENST00000457463 SERPINB2P05120 415 aa15.79■□□□□ 0.12
CNOT3-205ENST00000457463 PHAXQ9H814 394 aaKnown RBP15.79■□□□□ 0.12
CNOT3-205ENST00000457463 BCORQ6W2J9 1755 aa15.79■□□□□ 0.12
CNOT3-205ENST00000457463 VAMP4O75379 141 aa15.78■□□□□ 0.12
CNOT3-205ENST00000457463 SLFN5Q08AF3 891 aa15.78■□□□□ 0.12
CNOT3-205ENST00000457463 MYH16Q9H6N6 1097 aa15.78■□□□□ 0.12
CNOT3-205ENST00000457463 DBF4Q9UBU7 674 aaPredicted RBP15.78■□□□□ 0.12
CNOT3-205ENST00000457463 WWC3Q9ULE0 1092 aa15.78■□□□□ 0.12
CNOT3-205ENST00000457463 CARMIL3Q8ND23 1372 aa15.77■□□□□ 0.12
CNOT3-205ENST00000457463 HNRNPUQ00839 825 aaKnown RBP eCLIP15.77■□□□□ 0.12
CNOT3-205ENST00000457463 CLEC4GQ6UXB4 293 aa15.77■□□□□ 0.12
CNOT3-205ENST00000457463 KIF6Q6ZMV9 814 aa15.77■□□□□ 0.12
CNOT3-205ENST00000457463 CD2APQ9Y5K6 639 aa15.77■□□□□ 0.12
CNOT3-205ENST00000457463 C10orf71Q711Q0 1435 aa15.77■□□□□ 0.11
CNOT3-205ENST00000457463 FAM177BA6PVY3 158 aa15.76■□□□□ 0.11
CNOT3-205ENST00000457463 ERVV-1B6SEH8 477 aa15.76■□□□□ 0.11
CNOT3-205ENST00000457463 GPTP24298 496 aa15.76■□□□□ 0.11
CNOT3-205ENST00000457463 G2E3Q7L622 706 aa15.76■□□□□ 0.11
CNOT3-205ENST00000457463 SETDB2Q96T68 719 aa15.76■□□□□ 0.11
CNOT3-205ENST00000457463 NIP7Q9Y221 180 aaKnown RBP eCLIP15.76■□□□□ 0.11
CNOT3-205ENST00000457463 E9PSI1 815 aa15.75■□□□□ 0.11
CNOT3-205ENST00000457463 CCDC30Q5VVM6 783 aa15.75■□□□□ 0.11
CNOT3-205ENST00000457463 ZNF428Q96B54 188 aa15.75■□□□□ 0.11
CNOT3-205ENST00000457463 HYPKQ9NX55 129 aa15.75■□□□□ 0.11
CNOT3-205ENST00000457463 UBN2Q6ZU65 1347 aa15.74■□□□□ 0.11
CNOT3-205ENST00000457463 PRR5LQ6MZQ0 368 aa15.74■□□□□ 0.11
CNOT3-205ENST00000457463 GIGYF2Q6Y7W6 1299 aaKnown RBP15.74■□□□□ 0.11
CNOT3-205ENST00000457463 TRMT2AQ8IZ69 625 aaKnown RBP15.74■□□□□ 0.11
CNOT3-205ENST00000457463 ZNF652Q9Y2D9 606 aa15.74■□□□□ 0.11
CNOT3-205ENST00000457463 GOLGB1Q14789 3259 aaKnown RBP15.74■□□□□ 0.11
CNOT3-205ENST00000457463 AFDNP55196 1824 aaKnown RBP15.73■□□□□ 0.11
CNOT3-205ENST00000457463 UTRNP46939 3433 aa15.73■□□□□ 0.11
CNOT3-205ENST00000457463 A0A0G2JLW4 131 aa15.73■□□□□ 0.11
CNOT3-205ENST00000457463 ZNF34Q8IZ26 560 aa15.73■□□□□ 0.11
CNOT3-205ENST00000457463 PXDNLA1KZ92 1463 aa15.72■□□□□ 0.11
CNOT3-205ENST00000457463 NRXN2Q9P2S2 1712 aa15.72■□□□□ 0.11
CNOT3-205ENST00000457463 ATP10DQ9P241 1426 aa15.72■□□□□ 0.11
CNOT3-205ENST00000457463 RGL2O15211 777 aa15.72■□□□□ 0.11
CNOT3-205ENST00000457463 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
CNOT3-205ENST00000457463 DPEP1P16444 411 aa15.72■□□□□ 0.11
CNOT3-205ENST00000457463 CHRNA5P30532 468 aa15.72■□□□□ 0.11
CNOT3-205ENST00000457463 SUSD4Q5VX71 490 aa15.72■□□□□ 0.11
CNOT3-205ENST00000457463 ANKRD13DQ6ZTN6 518 aa15.72■□□□□ 0.11
CNOT3-205ENST00000457463 KIAA1551Q9HCM1 1747 aa15.71■□□□□ 0.11
CNOT3-205ENST00000457463 KCNA3P22001 575 aa15.71■□□□□ 0.11
CNOT3-205ENST00000457463 NBPF5PQ86XG9 351 aaPredicted RBP15.71■□□□□ 0.11
CNOT3-205ENST00000457463 NUTM1Q86Y26 1132 aa15.71■□□□□ 0.11
CNOT3-205ENST00000457463 PLBD2Q8NHP8 589 aa15.71■□□□□ 0.11
CNOT3-205ENST00000457463 NUP98P52948 1817 aa15.71■□□□□ 0.1
CNOT3-205ENST00000457463 ATP5J2-PTCD1G3V325 749 aa15.7■□□□□ 0.1
CNOT3-205ENST00000457463 YBX3P16989 372 aaKnown RBP eCLIP15.7■□□□□ 0.16e-10■■□□□ 13.4
CNOT3-205ENST00000457463 TCIRG1Q13488 830 aa15.7■□□□□ 0.1
CNOT3-205ENST00000457463 PELP1Q8IZL8 1130 aaKnown RBP15.7■□□□□ 0.1
CNOT3-205ENST00000457463 CNBD1Q8NA66 436 aa15.7■□□□□ 0.1
CNOT3-205ENST00000457463 STK31Q9BXU1 1019 aa15.7■□□□□ 0.1
CNOT3-205ENST00000457463 KIF13BQ9NQT8 1826 aa15.7■□□□□ 0.1
CNOT3-205ENST00000457463 TGFB2P61812 414 aa15.69■□□□□ 0.1
CNOT3-205ENST00000457463 RIC3Q7Z5B4 369 aa15.69■□□□□ 0.1
CNOT3-205ENST00000457463 N4BP2Q86UW6 1770 aaPredicted RBP15.68■□□□□ 0.1
CNOT3-205ENST00000457463 ABCC12Q96J65 1359 aa15.68■□□□□ 0.1
CNOT3-205ENST00000457463 NTSR2O95665 410 aa15.68■□□□□ 0.1
CNOT3-205ENST00000457463 ERFEQ4G0M1 354 aa15.68■□□□□ 0.1
CNOT3-205ENST00000457463 NLRP10Q86W26 655 aa15.68■□□□□ 0.1
CNOT3-205ENST00000457463 SYNE4Q8N205 404 aa15.68■□□□□ 0.1
CNOT3-205ENST00000457463 ISCA1Q9BUE6 129 aa15.68■□□□□ 0.1
CNOT3-205ENST00000457463 ADCY9O60503 1353 aa15.67■□□□□ 0.1
CNOT3-205ENST00000457463 PI4KAP2A4QPH2 592 aa15.67■□□□□ 0.1
CNOT3-205ENST00000457463 NPHP1O15259 732 aa15.67■□□□□ 0.1
CNOT3-205ENST00000457463 FLIIQ13045 1269 aa15.67■□□□□ 0.1
CNOT3-205ENST00000457463 HSP90AB3PQ58FF7 597 aa15.67■□□□□ 0.1
CNOT3-205ENST00000457463 TPTE2Q6XPS3 522 aa15.67■□□□□ 0.1
CNOT3-205ENST00000457463 PI4KAP1Q8N8J0 262 aa15.67■□□□□ 0.1
CNOT3-205ENST00000457463 MYD88Q99836 296 aa15.67■□□□□ 0.1
CNOT3-205ENST00000457463 MAP3K2Q9Y2U5 619 aa15.67■□□□□ 0.1
CNOT3-205ENST00000457463 ANKRD31Q8N7Z5 1873 aa15.66■□□□□ 0.1
CNOT3-205ENST00000457463 ST5P78524 1137 aa15.66■□□□□ 0.1
CNOT3-205ENST00000457463 GPR162Q16538 588 aa15.66■□□□□ 0.1
CNOT3-205ENST00000457463 C2CD5Q86YS7 1000 aa15.66■□□□□ 0.1
CNOT3-205ENST00000457463 SSH1Q8WYL5 1049 aa15.66■□□□□ 0.1
CNOT3-205ENST00000457463 BRIP1Q9BX63 1249 aa15.66■□□□□ 0.1
CNOT3-205ENST00000457463 BCL2L13Q9BXK5 485 aa15.66■□□□□ 0.1
CNOT3-205ENST00000457463 CHMP4AQ9BY43 222 aa15.66■□□□□ 0.1
CNOT3-205ENST00000457463 ZBED9Q6R2W3 1325 aa15.66■□□□□ 0.1
CNOT3-205ENST00000457463 PARP10Q53GL7 1025 aa15.65■□□□□ 0.1
CNOT3-205ENST00000457463 KSR2Q6VAB6 950 aa15.65■□□□□ 0.1
CNOT3-205ENST00000457463 C3orf67Q6ZVT6 689 aa15.65■□□□□ 0.1
CNOT3-205ENST00000457463 MRPL50Q8N5N7 158 aaKnown RBP15.65■□□□□ 0.1
CNOT3-205ENST00000457463 METTL22Q9BUU2 404 aaPredicted RBP15.65■□□□□ 0.1
CNOT3-205ENST00000457463 UTP14AQ9BVJ6 771 aaKnown RBP15.65■□□□□ 0.1
CNOT3-205ENST00000457463 ARFGEF2Q9Y6D5 1785 aa15.64■□□□□ 0.1
CNOT3-205ENST00000457463 F6X3S4 739 aa15.64■□□□□ 0.09
CNOT3-205ENST00000457463 IGKV5-2P06315 115 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms