RNA–Protein interactions for RNA: ENST00000455540.2

CYCSP53-201, Transcript of cytochrome c, somatic pseudogene 53, humanhuman

BASIC

Gene CYCSP53, Length 265 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP53-201ENST00000455540 VEGFBP49765 207 aa10.66□□□□□ -0.7
CYCSP53-201ENST00000455540 ARID4AP29374 1257 aaPredicted RBP10.65□□□□□ -0.7
CYCSP53-201ENST00000455540 C11orf91Q3C1V1 193 aa10.65□□□□□ -0.7
CYCSP53-201ENST00000455540 C16orf46Q6P387 395 aa10.65□□□□□ -0.7
CYCSP53-201ENST00000455540 TRAIPQ9BWF2 469 aa10.65□□□□□ -0.7
CYCSP53-201ENST00000455540 BRD1O95696 1058 aa10.64□□□□□ -0.71
CYCSP53-201ENST00000455540 IER5Q5VY09 327 aa10.64□□□□□ -0.71
CYCSP53-201ENST00000455540 GTPBP3Q969Y2 492 aaKnown RBP10.64□□□□□ -0.71
CYCSP53-201ENST00000455540 ZCCHC2Q9C0B9 1178 aaKnown RBP10.64□□□□□ -0.71
CYCSP53-201ENST00000455540 ATXN7L1Q9ULK2 861 aaPredicted RBP10.64□□□□□ -0.71
CYCSP53-201ENST00000455540 ATXN7O15265 892 aaPredicted RBP10.63□□□□□ -0.71
CYCSP53-201ENST00000455540 LAMC2Q13753 1193 aa10.63□□□□□ -0.71
CYCSP53-201ENST00000455540 LRRC69Q6ZNQ3 347 aa10.63□□□□□ -0.71
CYCSP53-201ENST00000455540 SUSD3Q96L08 255 aa10.63□□□□□ -0.71
CYCSP53-201ENST00000455540 QTRT2Q9H974 415 aaKnown RBP10.63□□□□□ -0.71
CYCSP53-201ENST00000455540 PATL2C9JE40 543 aaKnown RBP10.62□□□□□ -0.71
CYCSP53-201ENST00000455540 FAM157BP0CG42 384 aa10.62□□□□□ -0.71
CYCSP53-201ENST00000455540 PDIA4P13667 645 aaKnown RBP10.62□□□□□ -0.71
CYCSP53-201ENST00000455540 MKNK1Q9BUB5 465 aa10.62□□□□□ -0.71
CYCSP53-201ENST00000455540 NSFL1CQ9UNZ2 370 aaKnown RBP10.62□□□□□ -0.71
CYCSP53-201ENST00000455540 CARNS1A5YM72 827 aa10.61□□□□□ -0.71
CYCSP53-201ENST00000455540 TGFBR3LH3BV60 316 aa10.61□□□□□ -0.71
CYCSP53-201ENST00000455540 BRD2P25440 801 aaKnown RBP10.61□□□□□ -0.71
CYCSP53-201ENST00000455540 UBAP2LQ14157 1087 aaKnown RBP10.61□□□□□ -0.71
CYCSP53-201ENST00000455540 COX20Q5RI15 118 aa10.61□□□□□ -0.71
CYCSP53-201ENST00000455540 PHLDB3Q6NSJ2 640 aa10.61□□□□□ -0.71
CYCSP53-201ENST00000455540 DGKZQ13574 1117 aa10.6□□□□□ -0.71
CYCSP53-201ENST00000455540 NDFIP2Q9NV92 336 aa10.6□□□□□ -0.71
CYCSP53-201ENST00000455540 ERBB4Q15303 1308 aa10.59□□□□□ -0.71
CYCSP53-201ENST00000455540 THBS1P07996 1170 aa10.59□□□□□ -0.71
CYCSP53-201ENST00000455540 IFT43Q96FT9 208 aa10.59□□□□□ -0.71
CYCSP53-201ENST00000455540 BNIP3LO60238 219 aa10.58□□□□□ -0.72
CYCSP53-201ENST00000455540 TNP2Q05952 138 aa10.58□□□□□ -0.72
CYCSP53-201ENST00000455540 NAA30Q147X3 362 aaPredicted RBP10.58□□□□□ -0.72
CYCSP53-201ENST00000455540 GPR161Q8N6U8 529 aaKnown RBP10.58□□□□□ -0.72
CYCSP53-201ENST00000455540 CCER1Q8TC90 406 aaPredicted RBP10.58□□□□□ -0.72
CYCSP53-201ENST00000455540 FAM13BQ9NYF5 915 aa10.58□□□□□ -0.72
CYCSP53-201ENST00000455540 LRFN2Q9ULH4 789 aa10.58□□□□□ -0.72
CYCSP53-201ENST00000455540 EPB42P16452 691 aa10.57□□□□□ -0.72
CYCSP53-201ENST00000455540 FAM182BQ5T319 152 aa10.57□□□□□ -0.72
CYCSP53-201ENST00000455540 BTLAQ7Z6A9 289 aa10.57□□□□□ -0.72
CYCSP53-201ENST00000455540 ABTB2Q8N961 1025 aa10.57□□□□□ -0.72
CYCSP53-201ENST00000455540 CEP63Q96MT8 703 aa10.57□□□□□ -0.72
CYCSP53-201ENST00000455540 COL25A1Q9BXS0 654 aaPredicted RBP10.57□□□□□ -0.72
CYCSP53-201ENST00000455540 C11orf16Q9NQ32 467 aa10.57□□□□□ -0.72
CYCSP53-201ENST00000455540 KLK14Q9P0G3 267 aa10.57□□□□□ -0.72
CYCSP53-201ENST00000455540 STIM2Q9P246 746 aa10.57□□□□□ -0.72
CYCSP53-201ENST00000455540 KHNYNO15037 678 aaKnown RBP10.56□□□□□ -0.72
CYCSP53-201ENST00000455540 MAPTP10636 758 aaKnown RBP10.56□□□□□ -0.72
CYCSP53-201ENST00000455540 MX2P20592 715 aa10.56□□□□□ -0.72
CYCSP53-201ENST00000455540 SF3B2Q13435 895 aaKnown RBP10.56□□□□□ -0.72
CYCSP53-201ENST00000455540 LCE2AQ5TA79 106 aaPredicted RBP10.56□□□□□ -0.72
CYCSP53-201ENST00000455540 ZNF280CQ8ND82 737 aa10.56□□□□□ -0.72
CYCSP53-201ENST00000455540 HELQQ8TDG4 1101 aa10.56□□□□□ -0.72
CYCSP53-201ENST00000455540 HSH2DQ96JZ2 352 aa10.56□□□□□ -0.72
CYCSP53-201ENST00000455540 MBIPQ9NS73 344 aa10.56□□□□□ -0.72
CYCSP53-201ENST00000455540 SEPT3Q9UH03 358 aa10.56□□□□□ -0.72
CYCSP53-201ENST00000455540 EGFL7Q9UHF1 273 aa10.56□□□□□ -0.72
CYCSP53-201ENST00000455540 EFSO43281 561 aa10.55□□□□□ -0.72
CYCSP53-201ENST00000455540 FGFR3P22607 806 aa10.55□□□□□ -0.72
CYCSP53-201ENST00000455540 KCNQ4P56696 695 aa10.55□□□□□ -0.72
CYCSP53-201ENST00000455540 KCNA1Q09470 495 aa10.55□□□□□ -0.72
CYCSP53-201ENST00000455540 CAPN12Q6ZSI9 719 aa10.55□□□□□ -0.72
CYCSP53-201ENST00000455540 GTF3C2Q8WUA4 911 aaPredicted RBP10.55□□□□□ -0.72
CYCSP53-201ENST00000455540 SAP130Q9H0E3 1048 aa10.55□□□□□ -0.72
CYCSP53-201ENST00000455540 MARK1Q9P0L2 795 aa10.55□□□□□ -0.72
CYCSP53-201ENST00000455540 GPR25O00155 361 aa10.54□□□□□ -0.72
CYCSP53-201ENST00000455540 MICAL2O94851 1124 aa10.54□□□□□ -0.72
CYCSP53-201ENST00000455540 GMPRP36959 345 aa10.54□□□□□ -0.72
CYCSP53-201ENST00000455540 MAP2K3P46734 347 aa10.54□□□□□ -0.72
CYCSP53-201ENST00000455540 HOMEZQ8IX15 550 aa10.54□□□□□ -0.72
CYCSP53-201ENST00000455540 ABHD17AQ96GS6 310 aa10.54□□□□□ -0.72
CYCSP53-201ENST00000455540 EFCC1Q9HA90 598 aa10.54□□□□□ -0.72
CYCSP53-201ENST00000455540 BRD7Q9NPI1 651 aa10.54□□□□□ -0.72
CYCSP53-201ENST00000455540 DMGDHQ9UI17 866 aaKnown RBP10.54□□□□□ -0.72
CYCSP53-201ENST00000455540 WIPF1O43516 503 aa10.53□□□□□ -0.72
CYCSP53-201ENST00000455540 FKBP4Q02790 459 aaKnown RBP eCLIP10.53□□□□□ -0.72
CYCSP53-201ENST00000455540 SRSF11Q05519 484 aaKnown RBP10.53□□□□□ -0.72
CYCSP53-201ENST00000455540 TYRO3Q06418 890 aa10.53□□□□□ -0.72
CYCSP53-201ENST00000455540 ALKBH2Q6NS38 261 aa10.53□□□□□ -0.72
CYCSP53-201ENST00000455540 TXNDC2Q86VQ3 553 aa10.53□□□□□ -0.72
CYCSP53-201ENST00000455540 KCTD17Q8N5Z5 321 aa10.53□□□□□ -0.72
CYCSP53-201ENST00000455540 KCNH4Q9UQ05 1017 aa10.53□□□□□ -0.72
CYCSP53-201ENST00000455540 GNEQ9Y223 722 aaKnown RBP10.53□□□□□ -0.72
CYCSP53-201ENST00000455540 BCS1LQ9Y276 419 aa10.53□□□□□ -0.72
CYCSP53-201ENST00000455540 DCDC2BA2VCK2 349 aa10.52□□□□□ -0.73
CYCSP53-201ENST00000455540 FAM13AO94988 1023 aa10.52□□□□□ -0.73
CYCSP53-201ENST00000455540 ARSDP51689 593 aa10.52□□□□□ -0.73
CYCSP53-201ENST00000455540 GAS6Q14393 721 aa10.52□□□□□ -0.73
CYCSP53-201ENST00000455540 TNFRSF10BO14763 440 aa10.51□□□□□ -0.73
CYCSP53-201ENST00000455540 INPP5BP32019 993 aa10.51□□□□□ -0.73
CYCSP53-201ENST00000455540 IDH3AP50213 366 aa10.51□□□□□ -0.73
CYCSP53-201ENST00000455540 NEUROD1Q13562 356 aa10.51□□□□□ -0.73
CYCSP53-201ENST00000455540 TREML1Q86YW5 311 aa10.51□□□□□ -0.73
CYCSP53-201ENST00000455540 AVENQ9NQS1 362 aaPredicted RBP10.51□□□□□ -0.73
CYCSP53-201ENST00000455540 BMP4P12644 408 aa10.5□□□□□ -0.73
CYCSP53-201ENST00000455540 NPR3P17342 541 aa10.5□□□□□ -0.73
CYCSP53-201ENST00000455540 CNTNAP3BQ96NU0 1288 aa10.5□□□□□ -0.73
CYCSP53-201ENST00000455540 CNTNAP3Q9BZ76 1288 aa10.5□□□□□ -0.73
CYCSP53-201ENST00000455540 ABL1P00519 1130 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms