RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 ZNF652Q9Y2D9 606 aa32.39■■■□□ 2.78
MSH2-203ENST00000454849 NPHP1O15259 732 aa32.38■■■□□ 2.77
MSH2-203ENST00000454849 PRR5LQ6MZQ0 368 aa32.38■■■□□ 2.77
MSH2-203ENST00000454849 CLEC4GQ6UXB4 293 aa32.38■■■□□ 2.77
MSH2-203ENST00000454849 NIP7Q9Y221 180 aaKnown RBP eCLIP32.38■■■□□ 2.77
MSH2-203ENST00000454849 BCORQ6W2J9 1755 aa32.37■■■□□ 2.77
MSH2-203ENST00000454849 KIF6Q6ZMV9 814 aa32.37■■■□□ 2.77
MSH2-203ENST00000454849 IFT57Q9NWB7 429 aa32.37■■■□□ 2.77
MSH2-203ENST00000454849 PIM2Q9P1W9 311 aa32.37■■■□□ 2.77
MSH2-203ENST00000454849 ELL2O00472 640 aaPredicted RBP32.36■■■□□ 2.77
MSH2-203ENST00000454849 DUSP27Q5VZP5 1158 aa32.36■■■□□ 2.77
MSH2-203ENST00000454849 MAP3K15Q6ZN16 1313 aa32.35■■■□□ 2.77
MSH2-203ENST00000454849 GNAI1P63096 354 aa32.35■■■□□ 2.77
MSH2-203ENST00000454849 CALD1Q05682 793 aaKnown RBP32.35■■■□□ 2.77
MSH2-203ENST00000454849 AIMP1Q12904 312 aaKnown RBP32.35■■■□□ 2.77
MSH2-203ENST00000454849 NBPF5PQ86XG9 351 aaPredicted RBP32.35■■■□□ 2.77
MSH2-203ENST00000454849 C2CD5Q86YS7 1000 aa32.35■■■□□ 2.77
MSH2-203ENST00000454849 CNBD1Q8NA66 436 aa32.35■■■□□ 2.77
MSH2-203ENST00000454849 NRXN2Q9P2S2 1712 aa32.34■■■□□ 2.77
MSH2-203ENST00000454849 ERBB4Q15303 1308 aa32.34■■■□□ 2.77
MSH2-203ENST00000454849 LRP10Q7Z4F1 713 aa32.34■■■□□ 2.77
MSH2-203ENST00000454849 HDGFL1Q5TGJ6 251 aa32.33■■■□□ 2.77
MSH2-203ENST00000454849 WWC1Q8IX03 1113 aa32.33■■■□□ 2.77
MSH2-203ENST00000454849 CHD4Q14839 1912 aa32.33■■■□□ 2.77
MSH2-203ENST00000454849 GPTP24298 496 aa32.32■■■□□ 2.76
MSH2-203ENST00000454849 DALRD3Q5D0E6 543 aaKnown RBP32.32■■■□□ 2.76
MSH2-203ENST00000454849 TSR2Q969E8 191 aaKnown RBP32.32■■■□□ 2.76
MSH2-203ENST00000454849 CHPF2Q9P2E5 772 aa32.32■■■□□ 2.76
MSH2-203ENST00000454849 ARHGAP27Q6ZUM4 889 aa32.31■■■□□ 2.76
MSH2-203ENST00000454849 XAGE3Q8WTP9 111 aa32.31■■■□□ 2.76
MSH2-203ENST00000454849 ERVV-1B6SEH8 477 aa32.3■■■□□ 2.76
MSH2-203ENST00000454849 COPS6Q7L5N1 327 aa32.3■■■□□ 2.76
MSH2-203ENST00000454849 C8orf58Q8NAV2 365 aa32.3■■■□□ 2.76
MSH2-203ENST00000454849 H0YIN7 160 aa32.29■■■□□ 2.76
MSH2-203ENST00000454849 BRIP1Q9BX63 1249 aa32.29■■■□□ 2.76
MSH2-203ENST00000454849 ST5P78524 1137 aa32.28■■■□□ 2.76
MSH2-203ENST00000454849 ZNF784Q8NCA9 323 aaPredicted RBP32.28■■■□□ 2.76
MSH2-203ENST00000454849 ZNF622Q969S3 477 aaKnown RBP eCLIP32.28■■■□□ 2.76
MSH2-203ENST00000454849 DDX21Q9NR30 783 aaKnown RBP eCLIP32.28■■■□□ 2.76
MSH2-203ENST00000454849 CCDC27Q2M243 656 aa32.27■■■□□ 2.76
MSH2-203ENST00000454849 PDE6BP35913 854 aa32.25■■■□□ 2.75
MSH2-203ENST00000454849 TPTE2Q6XPS3 522 aa32.25■■■□□ 2.75
MSH2-203ENST00000454849 BRCA1P38398 1863 aaKnown RBP32.25■■■□□ 2.75
MSH2-203ENST00000454849 ANKRD31Q8N7Z5 1873 aa32.25■■■□□ 2.75
MSH2-203ENST00000454849 HOXB7P09629 217 aa32.24■■■□□ 2.75
MSH2-203ENST00000454849 GTF2E1P29083 439 aaPredicted RBP32.24■■■□□ 2.75
MSH2-203ENST00000454849 GIGYF2Q6Y7W6 1299 aaKnown RBP32.24■■■□□ 2.75
MSH2-203ENST00000454849 NUTM1Q86Y26 1132 aa32.24■■■□□ 2.75
MSH2-203ENST00000454849 TSPYL6Q8N831 410 aa32.24■■■□□ 2.75
MSH2-203ENST00000454849 ZNF428Q96B54 188 aa32.24■■■□□ 2.75
MSH2-203ENST00000454849 ZNF219Q9P2Y4 722 aaPredicted RBP32.24■■■□□ 2.75
MSH2-203ENST00000454849 RGL2O15211 777 aa32.23■■■□□ 2.75
MSH2-203ENST00000454849 UBN2Q6ZU65 1347 aa32.23■■■□□ 2.75
MSH2-203ENST00000454849 NUP98P52948 1817 aa32.22■■■□□ 2.75
MSH2-203ENST00000454849 TTLL6Q8N841 843 aa32.22■■■□□ 2.75
MSH2-203ENST00000454849 SUSD4Q5VX71 490 aa32.21■■■□□ 2.75
MSH2-203ENST00000454849 ZNF34Q8IZ26 560 aa32.21■■■□□ 2.75
MSH2-203ENST00000454849 DBF4Q9UBU7 674 aaPredicted RBP32.21■■■□□ 2.75
MSH2-203ENST00000454849 TCERG1O14776 1098 aaKnown RBP32.19■■■□□ 2.74
MSH2-203ENST00000454849 ERFEQ4G0M1 354 aa32.19■■■□□ 2.74
MSH2-203ENST00000454849 ATP10DQ9P241 1426 aa32.18■■■□□ 2.74
MSH2-203ENST00000454849 SRGNP10124 158 aa32.16■■■□□ 2.74
MSH2-203ENST00000454849 PHAXQ9H814 394 aaKnown RBP32.16■■■□□ 2.74
MSH2-203ENST00000454849 COL11A2P13942 1736 aaPredicted RBP32.15■■■□□ 2.74
MSH2-203ENST00000454849 ZNF526Q8TF50 670 aaPredicted RBP32.15■■■□□ 2.74
MSH2-203ENST00000454849 NYXQ9GZU5 481 aa32.15■■■□□ 2.74
MSH2-203ENST00000454849 SPINK5Q9NQ38 1064 aaPredicted RBP32.15■■■□□ 2.74
MSH2-203ENST00000454849 HYPKQ9NX55 129 aa32.15■■■□□ 2.74
MSH2-203ENST00000454849 ABCC12Q96J65 1359 aa32.15■■■□□ 2.74
MSH2-203ENST00000454849 IL16Q14005 1332 aa32.14■■■□□ 2.74
MSH2-203ENST00000454849 C21orf2O43822 256 aa32.13■■■□□ 2.73
MSH2-203ENST00000454849 RASSF7Q02833 373 aa32.13■■■□□ 2.73
MSH2-203ENST00000454849 NCBP3Q53F19 620 aaKnown RBP32.13■■■□□ 2.73
MSH2-203ENST00000454849 ANKRD13DQ6ZTN6 518 aa32.13■■■□□ 2.73
MSH2-203ENST00000454849 WDR63Q8IWG1 891 aa32.13■■■□□ 2.73
MSH2-203ENST00000454849 PDZRN3Q9UPQ7 1066 aa32.13■■■□□ 2.73
MSH2-203ENST00000454849 ARFGEF1Q9Y6D6 1849 aa32.12■■■□□ 2.73
MSH2-203ENST00000454849 FANCIQ9NVI1 1328 aa32.12■■■□□ 2.73
MSH2-203ENST00000454849 NTSR2O95665 410 aa32.12■■■□□ 2.73
MSH2-203ENST00000454849 MASTLQ96GX5 879 aa32.12■■■□□ 2.73
MSH2-203ENST00000454849 DLEC1Q9Y238 1755 aa32.12■■■□□ 2.73
MSH2-203ENST00000454849 TCIRG1Q13488 830 aa32.11■■■□□ 2.73
MSH2-203ENST00000454849 STYK1Q6J9G0 422 aa32.11■■■□□ 2.73
MSH2-203ENST00000454849 PLBD2Q8NHP8 589 aa32.11■■■□□ 2.73
MSH2-203ENST00000454849 CCDC30Q5VVM6 783 aa32.1■■■□□ 2.73
MSH2-203ENST00000454849 C9orf131Q5VYM1 1079 aa32.1■■■□□ 2.73
MSH2-203ENST00000454849 PPP1R42Q7Z4L9 355 aa32.1■■■□□ 2.73
MSH2-203ENST00000454849 SYNE4Q8N205 404 aa32.1■■■□□ 2.73
MSH2-203ENST00000454849 UTP14AQ9BVJ6 771 aaKnown RBP32.1■■■□□ 2.73
MSH2-203ENST00000454849 ATP5J2-PTCD1G3V325 749 aa32.09■■■□□ 2.73
MSH2-203ENST00000454849 TWISTNBQ3B726 338 aaPredicted RBP32.09■■■□□ 2.73
MSH2-203ENST00000454849 PARP10Q53GL7 1025 aa32.09■■■□□ 2.73
MSH2-203ENST00000454849 PRPF40BQ6NWY9 871 aaKnown RBP32.09■■■□□ 2.73
MSH2-203ENST00000454849 NLRP10Q86W26 655 aa32.09■■■□□ 2.73
MSH2-203ENST00000454849 CNKSR1Q969H4 720 aa32.09■■■□□ 2.73
MSH2-203ENST00000454849 KLRG2A4D1S0 409 aaPredicted RBP32.08■■■□□ 2.73
MSH2-203ENST00000454849 NPR1P16066 1061 aa32.08■■■□□ 2.73
MSH2-203ENST00000454849 C3orf67Q6ZVT6 689 aa32.08■■■□□ 2.73
MSH2-203ENST00000454849 HSP90AB3PQ58FF7 597 aa32.07■■■□□ 2.72
MSH2-203ENST00000454849 EXOSC9Q06265 439 aaKnown RBP32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms