RNA–Protein interactions for RNA: ENST00000454108.5

CALD1-212, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-212ENST00000454108 USP16Q9Y5T5 823 aa20.94■□□□□ 0.94
CALD1-212ENST00000454108 C21orf2O43822 256 aa20.93■□□□□ 0.94
CALD1-212ENST00000454108 SNRPA1P09661 255 aaKnown RBP20.93■□□□□ 0.94
CALD1-212ENST00000454108 ZNF219Q9P2Y4 722 aaPredicted RBP20.93■□□□□ 0.94
CALD1-212ENST00000454108 PRAMEF22A3QJZ6 481 aa20.92■□□□□ 0.94
CALD1-212ENST00000454108 ZNF652Q9Y2D9 606 aa20.92■□□□□ 0.94
CALD1-212ENST00000454108 HTATSF1O43719 755 aaKnown RBP20.91■□□□□ 0.94
CALD1-212ENST00000454108 VEGFAP15692 232 aaPredicted RBP20.91■□□□□ 0.94
CALD1-212ENST00000454108 HTRA3P83110 453 aa20.91■□□□□ 0.94
CALD1-212ENST00000454108 DCTN1Q14203 1278 aa20.91■□□□□ 0.94
CALD1-212ENST00000454108 KDM3BQ7LBC6 1761 aa20.91■□□□□ 0.94
CALD1-212ENST00000454108 CNKSR1Q969H4 720 aa20.9■□□□□ 0.94
CALD1-212ENST00000454108 PCNTO95613 3336 aa20.9■□□□□ 0.94
CALD1-212ENST00000454108 STYK1Q6J9G0 422 aa20.89■□□□□ 0.93
CALD1-212ENST00000454108 CLEC4GQ6UXB4 293 aa20.89■□□□□ 0.93
CALD1-212ENST00000454108 NBPF5PQ86XG9 351 aaPredicted RBP20.89■□□□□ 0.93
CALD1-212ENST00000454108 KLRG1Q96E93 195 aa20.89■□□□□ 0.93
CALD1-212ENST00000454108 TAOK3Q9H2K8 898 aa20.89■□□□□ 0.93
CALD1-212ENST00000454108 LTBP3Q9NS15 1303 aa20.88■□□□□ 0.93
CALD1-212ENST00000454108 SRGNP10124 158 aa20.88■□□□□ 0.93
CALD1-212ENST00000454108 ERFEQ4G0M1 354 aa20.88■□□□□ 0.93
CALD1-212ENST00000454108 DPY19L2Q6NUT2 758 aa20.88■□□□□ 0.93
CALD1-212ENST00000454108 PRPF40BQ6NWY9 871 aaKnown RBP20.88■□□□□ 0.93
CALD1-212ENST00000454108 MASTLQ96GX5 879 aa20.88■□□□□ 0.93
CALD1-212ENST00000454108 NEFMP07197 916 aa20.87■□□□□ 0.93
CALD1-212ENST00000454108 SOGA3Q5TF21 947 aa20.87■□□□□ 0.93
CALD1-212ENST00000454108 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
CALD1-212ENST00000454108 NBPF26B4DH59 902 aa20.85■□□□□ 0.93
CALD1-212ENST00000454108 RGL2O15211 777 aa20.85■□□□□ 0.93
CALD1-212ENST00000454108 NBPF10Q6P3W6 841 aaKnown RBP20.85■□□□□ 0.93
CALD1-212ENST00000454108 NBPF15Q8N660 670 aa20.85■□□□□ 0.93
CALD1-212ENST00000454108 NUP98P52948 1817 aa20.85■□□□□ 0.93
CALD1-212ENST00000454108 NIP7Q9Y221 180 aaKnown RBP eCLIP20.84■□□□□ 0.93
CALD1-212ENST00000454108 JMYQ8N9B5 988 aa20.83■□□□□ 0.93
CALD1-212ENST00000454108 TPTE2Q6XPS3 522 aa20.82■□□□□ 0.92
CALD1-212ENST00000454108 MIS18AQ9NYP9 233 aa20.82■□□□□ 0.92
CALD1-212ENST00000454108 POTECB2RU33 542 aa20.81■□□□□ 0.92
CALD1-212ENST00000454108 NPR1P16066 1061 aa20.81■□□□□ 0.92
CALD1-212ENST00000454108 CCDC93Q567U6 631 aa20.81■□□□□ 0.92
CALD1-212ENST00000454108 PNISRQ8TF01 805 aaKnown RBP20.81■□□□□ 0.92
CALD1-212ENST00000454108 FAM177BA6PVY3 158 aa20.8■□□□□ 0.92
CALD1-212ENST00000454108 SCN4AP35499 1836 aa20.8■□□□□ 0.92
CALD1-212ENST00000454108 KLRG2A4D1S0 409 aaPredicted RBP20.79■□□□□ 0.92
CALD1-212ENST00000454108 GTF2E1P29083 439 aaPredicted RBP20.78■□□□□ 0.92
CALD1-212ENST00000454108 HLFQ16534 295 aa20.78■□□□□ 0.92
CALD1-212ENST00000454108 C7orf43Q8WVR3 580 aa20.78■□□□□ 0.92
CALD1-212ENST00000454108 PLEKHF1Q96S99 279 aa20.78■□□□□ 0.92
CALD1-212ENST00000454108 MAPK8IP3Q9UPT6 1336 aa20.78■□□□□ 0.92
CALD1-212ENST00000454108 DDNO94850 711 aaPredicted RBP20.77■□□□□ 0.92
CALD1-212ENST00000454108 NFE2L2Q16236 605 aa20.77■□□□□ 0.92
CALD1-212ENST00000454108 FKBP4Q02790 459 aaKnown RBP eCLIP20.76■□□□□ 0.91
CALD1-212ENST00000454108 KIF6Q6ZMV9 814 aa20.76■□□□□ 0.91
CALD1-212ENST00000454108 NGEFQ8N5V2 710 aa20.76■□□□□ 0.91
CALD1-212ENST00000454108 PNNQ9H307 717 aaKnown RBP20.76■□□□□ 0.91
CALD1-212ENST00000454108 EIF4A1P60842 406 aaKnown RBP20.75■□□□□ 0.91
CALD1-212ENST00000454108 THUMPD2Q9BTF0 503 aaKnown RBP20.75■□□□□ 0.91
CALD1-212ENST00000454108 NYXQ9GZU5 481 aa20.75■□□□□ 0.91
CALD1-212ENST00000454108 MAP3K15Q6ZN16 1313 aa20.75■□□□□ 0.91
CALD1-212ENST00000454108 ABCC12Q96J65 1359 aa20.74■□□□□ 0.91
CALD1-212ENST00000454108 IQCA1LA6NCM1 817 aa20.74■□□□□ 0.91
CALD1-212ENST00000454108 ERVV-1B6SEH8 477 aa20.74■□□□□ 0.91
CALD1-212ENST00000454108 ALDH1B1P30837 517 aa20.74■□□□□ 0.91
CALD1-212ENST00000454108 CHADLQ6NUI6 762 aa20.74■□□□□ 0.91
CALD1-212ENST00000454108 RTKN2Q8IZC4 609 aa20.74■□□□□ 0.91
CALD1-212ENST00000454108 RRP7AQ9Y3A4 280 aaKnown RBP20.74■□□□□ 0.91
CALD1-212ENST00000454108 MYL6BP14649 208 aa20.73■□□□□ 0.91
CALD1-212ENST00000454108 OLFM4Q6UX06 510 aa20.73■□□□□ 0.91
CALD1-212ENST00000454108 ZNF277Q9NRM2 450 aaPredicted RBP20.73■□□□□ 0.91
CALD1-212ENST00000454108 IBTKQ9P2D0 1353 aaPredicted RBP20.72■□□□□ 0.91
CALD1-212ENST00000454108 RIC1Q4ADV7 1423 aa20.72■□□□□ 0.91
CALD1-212ENST00000454108 POTEIP0CG38 1075 aa20.72■□□□□ 0.91
CALD1-212ENST00000454108 POTEJP0CG39 1038 aa20.72■□□□□ 0.91
CALD1-212ENST00000454108 TTLL7Q6ZT98 887 aa20.72■□□□□ 0.91
CALD1-212ENST00000454108 NUTM1Q86Y26 1132 aa20.72■□□□□ 0.91
CALD1-212ENST00000454108 L3MBTL3Q96JM7 780 aaPredicted RBP20.72■□□□□ 0.91
CALD1-212ENST00000454108 ZBTB3Q9H5J0 574 aa20.71■□□□□ 0.91
CALD1-212ENST00000454108 ZNF541Q9H0D2 1346 aa20.71■□□□□ 0.91
CALD1-212ENST00000454108 CRY2Q49AN0 593 aa20.7■□□□□ 0.9
CALD1-212ENST00000454108 ERBB4Q15303 1308 aa20.7■□□□□ 0.9
CALD1-212ENST00000454108 ANKRD36CQ5JPF3 1778 aa20.69■□□□□ 0.9
CALD1-212ENST00000454108 GPTP24298 496 aa20.69■□□□□ 0.9
CALD1-212ENST00000454108 IARSP41252 1262 aaKnown RBP20.69■□□□□ 0.9
CALD1-212ENST00000454108 LDHDQ86WU2 507 aa20.69■□□□□ 0.9
CALD1-212ENST00000454108 RPGRQ92834 1020 aaKnown RBP20.69■□□□□ 0.9
CALD1-212ENST00000454108 TSPYL4Q9UJ04 414 aa20.69■□□□□ 0.9
CALD1-212ENST00000454108 UBN2Q6ZU65 1347 aa20.69■□□□□ 0.9
CALD1-212ENST00000454108 SNED1Q8TER0 1413 aa20.69■□□□□ 0.9
CALD1-212ENST00000454108 ADAMTSL1Q8N6G6 1762 aa20.68■□□□□ 0.9
CALD1-212ENST00000454108 COL13A1Q5TAT6 717 aaPredicted RBP20.68■□□□□ 0.9
CALD1-212ENST00000454108 TAF1DQ9H5J8 278 aaPredicted RBP20.68■□□□□ 0.9
CALD1-212ENST00000454108 CREBZFQ9NS37 354 aa20.68■□□□□ 0.9
CALD1-212ENST00000454108 SYNE4Q8N205 404 aa20.67■□□□□ 0.9
CALD1-212ENST00000454108 PSMD1Q99460 953 aa20.67■□□□□ 0.9
CALD1-212ENST00000454108 HSPA1AP0DMV8 641 aaKnown RBP20.66■□□□□ 0.9
CALD1-212ENST00000454108 HSPA1BP0DMV9 641 aaKnown RBP20.66■□□□□ 0.9
CALD1-212ENST00000454108 HACL1Q9UJ83 578 aa20.66■□□□□ 0.9
CALD1-212ENST00000454108 RIPK4P57078 832 aa20.65■□□□□ 0.9
CALD1-212ENST00000454108 EAPPQ56P03 285 aaPredicted RBP20.65■□□□□ 0.9
CALD1-212ENST00000454108 SUSD4Q5VX71 490 aa20.65■□□□□ 0.9
CALD1-212ENST00000454108 CC2D2BQ6DHV5 1058 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms