RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 SOGA3Q5TF21 947 aa29.37■■■□□ 2.29
HMG20B-206ENST00000453933 NPM2Q86SE8 214 aaKnown RBP29.37■■■□□ 2.29
HMG20B-206ENST00000453933 DICER1Q9UPY3 1922 aaKnown RBP29.37■■■□□ 2.29
HMG20B-206ENST00000453933 U2SURPO15042 1029 aaKnown RBP29.36■■■□□ 2.29
HMG20B-206ENST00000453933 GAS2L2Q8NHY3 880 aa29.36■■■□□ 2.29
HMG20B-206ENST00000453933 C7orf43Q8WVR3 580 aa29.36■■■□□ 2.29
HMG20B-206ENST00000453933 KIF7Q2M1P5 1343 aa29.36■■■□□ 2.29
HMG20B-206ENST00000453933 PASKQ96RG2 1323 aa29.36■■■□□ 2.29
HMG20B-206ENST00000453933 CNTNAP1P78357 1384 aa29.36■■■□□ 2.29
HMG20B-206ENST00000453933 SLX4Q8IY92 1834 aa29.36■■■□□ 2.29
HMG20B-206ENST00000453933 IQCA1LA6NCM1 817 aa29.35■■■□□ 2.29
HMG20B-206ENST00000453933 LDHDQ86WU2 507 aa29.35■■■□□ 2.29
HMG20B-206ENST00000453933 DZIP3Q86Y13 1208 aaKnown RBP29.35■■■□□ 2.29
HMG20B-206ENST00000453933 TAF1DQ9H5J8 278 aaPredicted RBP29.35■■■□□ 2.29
HMG20B-206ENST00000453933 L3MBTL3Q96JM7 780 aaPredicted RBP29.34■■■□□ 2.29
HMG20B-206ENST00000453933 PIP4K2AP48426 406 aaPredicted RBP29.33■■■□□ 2.29
HMG20B-206ENST00000453933 USP16Q9Y5T5 823 aa29.33■■■□□ 2.29
HMG20B-206ENST00000453933 ITGBL1O95965 494 aaPredicted RBP29.31■■■□□ 2.28
HMG20B-206ENST00000453933 NBPF5PQ86XG9 351 aaPredicted RBP29.31■■■□□ 2.28
HMG20B-206ENST00000453933 BTBD11A6QL63 1104 aa29.3■■■□□ 2.28
HMG20B-206ENST00000453933 VEGFBP49765 207 aa29.3■■■□□ 2.28
HMG20B-206ENST00000453933 CCDC93Q567U6 631 aa29.3■■■□□ 2.28
HMG20B-206ENST00000453933 PRDM10Q9NQV6 1147 aa29.3■■■□□ 2.28
HMG20B-206ENST00000453933 COL3A1P02461 1466 aaPredicted RBP29.29■■■□□ 2.28
HMG20B-206ENST00000453933 CEMIPQ8WUJ3 1361 aa29.29■■■□□ 2.28
HMG20B-206ENST00000453933 ZNF541Q9H0D2 1346 aa29.28■■■□□ 2.28
HMG20B-206ENST00000453933 PRAMEF22A3QJZ6 481 aa29.28■■■□□ 2.28
HMG20B-206ENST00000453933 TMEM88BA6NKF7 163 aa29.28■■■□□ 2.28
HMG20B-206ENST00000453933 NPR1P16066 1061 aa29.28■■■□□ 2.28
HMG20B-206ENST00000453933 EAPPQ56P03 285 aaPredicted RBP29.28■■■□□ 2.28
HMG20B-206ENST00000453933 OLFM4Q6UX06 510 aa29.28■■■□□ 2.28
HMG20B-206ENST00000453933 PHACTR3Q96KR7 559 aa29.28■■■□□ 2.28
HMG20B-206ENST00000453933 ZNF277Q9NRM2 450 aaPredicted RBP29.28■■■□□ 2.28
HMG20B-206ENST00000453933 SIPA1L3O60292 1781 aaPredicted RBP29.27■■■□□ 2.28
HMG20B-206ENST00000453933 CNGB1Q14028 1251 aaPredicted RBP29.27■■■□□ 2.28
HMG20B-206ENST00000453933 CLEC4GQ6UXB4 293 aa29.27■■■□□ 2.28
HMG20B-206ENST00000453933 KLRG2A4D1S0 409 aaPredicted RBP29.26■■■□□ 2.27
HMG20B-206ENST00000453933 CTCFP49711 727 aaPredicted RBP29.26■■■□□ 2.27
HMG20B-206ENST00000453933 FKBP4Q02790 459 aaKnown RBP eCLIP29.26■■■□□ 2.27
HMG20B-206ENST00000453933 AIDAQ96BJ3 306 aa29.25■■■□□ 2.27
HMG20B-206ENST00000453933 HACL1Q9UJ83 578 aa29.25■■■□□ 2.27
HMG20B-206ENST00000453933 CLEC11AQ9Y240 323 aa29.25■■■□□ 2.27
HMG20B-206ENST00000453933 TPTE2Q6XPS3 522 aa29.23■■■□□ 2.27
HMG20B-206ENST00000453933 WBP1LQ9NX94 342 aa29.23■■■□□ 2.27
HMG20B-206ENST00000453933 ZNF652Q9Y2D9 606 aa29.23■■■□□ 2.27
HMG20B-206ENST00000453933 CACNA1SQ13698 1873 aa29.23■■■□□ 2.27
HMG20B-206ENST00000453933 EPHX2P34913 555 aa29.22■■■□□ 2.27
HMG20B-206ENST00000453933 ARFGEF2Q9Y6D5 1785 aa29.21■■■□□ 2.27
HMG20B-206ENST00000453933 SNRPA1P09661 255 aaKnown RBP29.21■■■□□ 2.27
HMG20B-206ENST00000453933 PRKAR2BP31323 418 aa29.21■■■□□ 2.27
HMG20B-206ENST00000453933 RTKN2Q8IZC4 609 aa29.21■■■□□ 2.27
HMG20B-206ENST00000453933 NIP7Q9Y221 180 aaKnown RBP eCLIP29.21■■■□□ 2.27
HMG20B-206ENST00000453933 SCN4AP35499 1836 aa29.21■■■□□ 2.27
HMG20B-206ENST00000453933 BCORQ6W2J9 1755 aa29.21■■■□□ 2.27
HMG20B-206ENST00000453933 FAM177BA6PVY3 158 aa29.2■■■□□ 2.26
HMG20B-206ENST00000453933 NBPF26B4DH59 902 aa29.2■■■□□ 2.26
HMG20B-206ENST00000453933 LBX1P52954 281 aa29.2■■■□□ 2.26
HMG20B-206ENST00000453933 NBPF10Q6P3W6 841 aaKnown RBP29.2■■■□□ 2.26
HMG20B-206ENST00000453933 NBPF15Q8N660 670 aa29.2■■■□□ 2.26
HMG20B-206ENST00000453933 MAP1SQ66K74 1059 aaPredicted RBP29.19■■■□□ 2.26
HMG20B-206ENST00000453933 CNTROBQ8N137 903 aa29.19■■■□□ 2.26
HMG20B-206ENST00000453933 RSPH6AQ9H0K4 717 aa29.19■■■□□ 2.26
HMG20B-206ENST00000453933 RNF123Q5XPI4 1314 aa29.19■■■□□ 2.26
HMG20B-206ENST00000453933 FZD9O00144 591 aa29.18■■■□□ 2.26
HMG20B-206ENST00000453933 PNMA8AQ86V59 439 aaPredicted RBP29.18■■■□□ 2.26
HMG20B-206ENST00000453933 SYNE4Q8N205 404 aa29.18■■■□□ 2.26
HMG20B-206ENST00000453933 RASSF10A6NK89 507 aa29.17■■■□□ 2.26
HMG20B-206ENST00000453933 IARSP41252 1262 aaKnown RBP29.17■■■□□ 2.26
HMG20B-206ENST00000453933 DEFB115Q30KQ5 88 aa29.17■■■□□ 2.26
HMG20B-206ENST00000453933 NPC1L1Q9UHC9 1359 aa29.16■■■□□ 2.26
HMG20B-206ENST00000453933 MCM10Q7L590 875 aa29.16■■■□□ 2.26
HMG20B-206ENST00000453933 ALDH1B1P30837 517 aa29.15■■■□□ 2.26
HMG20B-206ENST00000453933 HLFQ16534 295 aa29.15■■■□□ 2.26
HMG20B-206ENST00000453933 RGL2O15211 777 aa29.14■■■□□ 2.26
HMG20B-206ENST00000453933 GPC2Q8N158 579 aa29.14■■■□□ 2.26
HMG20B-206ENST00000453933 ADAMTSL1Q8N6G6 1762 aa29.13■■■□□ 2.25
HMG20B-206ENST00000453933 HSPA8P11142 646 aaKnown RBP29.12■■■□□ 2.25
HMG20B-206ENST00000453933 RTF1Q92541 710 aaKnown RBP29.12■■■□□ 2.25
HMG20B-206ENST00000453933 WDR33Q9C0J8 1336 aaKnown RBP29.12■■■□□ 2.25
HMG20B-206ENST00000453933 GTF2E1P29083 439 aaPredicted RBP29.11■■■□□ 2.25
HMG20B-206ENST00000453933 DCTN1Q14203 1278 aa29.11■■■□□ 2.25
HMG20B-206ENST00000453933 JDP2Q8WYK2 163 aa29.1■■■□□ 2.25
HMG20B-206ENST00000453933 PSMD1Q99460 953 aa29.1■■■□□ 2.25
HMG20B-206ENST00000453933 ABT1Q9ULW3 272 aaKnown RBP29.09■■■□□ 2.25
HMG20B-206ENST00000453933 SNED1Q8TER0 1413 aa29.09■■■□□ 2.25
HMG20B-206ENST00000453933 MAP2K1Q02750 393 aaPredicted RBP29.08■■■□□ 2.25
HMG20B-206ENST00000453933 CFAP53Q96M91 514 aa29.08■■■□□ 2.25
HMG20B-206ENST00000453933 DDX21Q9NR30 783 aaKnown RBP eCLIP29.08■■■□□ 2.25
HMG20B-206ENST00000453933 GJA3Q9Y6H8 435 aa29.08■■■□□ 2.25
HMG20B-206ENST00000453933 FMR1Q06787 632 aaKnown RBP eCLIP29.07■■■□□ 2.24
HMG20B-206ENST00000453933 CRY2Q49AN0 593 aa29.07■■■□□ 2.24
HMG20B-206ENST00000453933 ABHD8Q96I13 439 aa29.07■■■□□ 2.24
HMG20B-206ENST00000453933 NUTM1Q86Y26 1132 aa29.06■■■□□ 2.24
HMG20B-206ENST00000453933 ABCC12Q96J65 1359 aa29.05■■■□□ 2.24
HMG20B-206ENST00000453933 U2AF1L5P0DN76 240 aaPredicted RBP29.05■■■□□ 2.24
HMG20B-206ENST00000453933 EIF6P56537 245 aaKnown RBP29.05■■■□□ 2.24
HMG20B-206ENST00000453933 U2AF1Q01081 240 aaKnown RBP eCLIP29.05■■■□□ 2.24
HMG20B-206ENST00000453933 MIS18AQ9NYP9 233 aa29.05■■■□□ 2.24
HMG20B-206ENST00000453933 NUDCQ9Y266 331 aa29.05■■■□□ 2.24
HMG20B-206ENST00000453933 CC2D2BQ6DHV5 1058 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms