RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 HOXB7P09629 217 aa19.01■□□□□ 0.63
VPS16-205ENST00000453689 TGFB2P61812 414 aa19.01■□□□□ 0.63
VPS16-205ENST00000453689 PROSER3Q2NL68 480 aa19.01■□□□□ 0.63
VPS16-205ENST00000453689 CLEC4GQ6UXB4 293 aa19.01■□□□□ 0.63
VPS16-205ENST00000453689 LRP10Q7Z4F1 713 aa19.01■□□□□ 0.63
VPS16-205ENST00000453689 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
VPS16-205ENST00000453689 ZNF652Q9Y2D9 606 aa19.01■□□□□ 0.63
VPS16-205ENST00000453689 CARMIL3Q8ND23 1372 aa19.01■□□□□ 0.63
VPS16-205ENST00000453689 ARFGEF2Q9Y6D5 1785 aa19.01■□□□□ 0.63
VPS16-205ENST00000453689 RGL2O15211 777 aa19■□□□□ 0.63
VPS16-205ENST00000453689 ANXA1P04083 346 aa19■□□□□ 0.63
VPS16-205ENST00000453689 DUSP27Q5VZP5 1158 aa19■□□□□ 0.63
VPS16-205ENST00000453689 TTLL7Q6ZT98 887 aa19■□□□□ 0.63
VPS16-205ENST00000453689 IL16Q14005 1332 aa19■□□□□ 0.63
VPS16-205ENST00000453689 MAP3K15Q6ZN16 1313 aa19■□□□□ 0.63
VPS16-205ENST00000453689 YBX3P16989 372 aaKnown RBP eCLIP18.99■□□□□ 0.63
VPS16-205ENST00000453689 HLFQ16534 295 aa18.99■□□□□ 0.63
VPS16-205ENST00000453689 HDGFL1Q5TGJ6 251 aa18.99■□□□□ 0.63
VPS16-205ENST00000453689 TSR2Q969E8 191 aaKnown RBP18.99■□□□□ 0.63
VPS16-205ENST00000453689 SETDB2Q96T68 719 aa18.99■□□□□ 0.63
VPS16-205ENST00000453689 A0A0G2JLW4 131 aa18.98■□□□□ 0.63
VPS16-205ENST00000453689 ERVV-1B6SEH8 477 aa18.98■□□□□ 0.63
VPS16-205ENST00000453689 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.63
VPS16-205ENST00000453689 KIF6Q6ZMV9 814 aa18.98■□□□□ 0.63
VPS16-205ENST00000453689 DDX21Q9NR30 783 aaKnown RBP eCLIP18.98■□□□□ 0.63
VPS16-205ENST00000453689 WWC3Q9ULE0 1092 aa18.98■□□□□ 0.63
VPS16-205ENST00000453689 GOLGB1Q14789 3259 aaKnown RBP18.97■□□□□ 0.63
VPS16-205ENST00000453689 DPEP1P16444 411 aa18.97■□□□□ 0.63
VPS16-205ENST00000453689 C8orf58Q8NAV2 365 aa18.97■□□□□ 0.63
VPS16-205ENST00000453689 ZBTB3Q9H5J0 574 aa18.97■□□□□ 0.63
VPS16-205ENST00000453689 CHPF2Q9P2E5 772 aa18.97■□□□□ 0.63
VPS16-205ENST00000453689 ELL2O00472 640 aaPredicted RBP18.96■□□□□ 0.63
VPS16-205ENST00000453689 WDR63Q8IWG1 891 aa18.96■□□□□ 0.63
VPS16-205ENST00000453689 NIP7Q9Y221 180 aaKnown RBP eCLIP18.96■□□□□ 0.63
VPS16-205ENST00000453689 ATP10DQ9P241 1426 aa18.96■□□□□ 0.63
VPS16-205ENST00000453689 KCNA3P22001 575 aa18.95■□□□□ 0.62
VPS16-205ENST00000453689 PRR5LQ6MZQ0 368 aa18.95■□□□□ 0.62
VPS16-205ENST00000453689 ZNF521Q96K83 1311 aa18.95■□□□□ 0.62
VPS16-205ENST00000453689 UTRNP46939 3433 aa18.94■□□□□ 0.62
VPS16-205ENST00000453689 CHRNA5P30532 468 aa18.94■□□□□ 0.62
VPS16-205ENST00000453689 COPS6Q7L5N1 327 aa18.94■□□□□ 0.62
VPS16-205ENST00000453689 TSPYL6Q8N831 410 aa18.94■□□□□ 0.62
VPS16-205ENST00000453689 XAGE3Q8WTP9 111 aa18.94■□□□□ 0.62
VPS16-205ENST00000453689 DBF4Q9UBU7 674 aaPredicted RBP18.94■□□□□ 0.62
VPS16-205ENST00000453689 TNRC6CQ9HCJ0 1690 aaKnown RBP18.94■□□□□ 0.62
VPS16-205ENST00000453689 CCDC88AQ3V6T2 1871 aa18.94■□□□□ 0.62
VPS16-205ENST00000453689 LAMB2P55268 1798 aa18.93■□□□□ 0.62
VPS16-205ENST00000453689 AIMP1Q12904 312 aaKnown RBP18.93■□□□□ 0.62
VPS16-205ENST00000453689 GIGYF2Q6Y7W6 1299 aaKnown RBP18.93■□□□□ 0.62
VPS16-205ENST00000453689 CCDC24Q8N4L8 307 aa18.93■□□□□ 0.62
VPS16-205ENST00000453689 CNBD1Q8NA66 436 aa18.93■□□□□ 0.62
VPS16-205ENST00000453689 FANCIQ9NVI1 1328 aa18.93■□□□□ 0.62
VPS16-205ENST00000453689 SBF1O95248 1867 aa18.92■□□□□ 0.62
VPS16-205ENST00000453689 NPHP1O15259 732 aa18.92■□□□□ 0.62
VPS16-205ENST00000453689 GRIN3BO60391 1043 aa18.92■□□□□ 0.62
VPS16-205ENST00000453689 NBPF5PQ86XG9 351 aaPredicted RBP18.92■□□□□ 0.62
VPS16-205ENST00000453689 ST5P78524 1137 aa18.91■□□□□ 0.62
VPS16-205ENST00000453689 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
VPS16-205ENST00000453689 HYPKQ9NX55 129 aa18.91■□□□□ 0.62
VPS16-205ENST00000453689 PIM2Q9P1W9 311 aa18.91■□□□□ 0.62
VPS16-205ENST00000453689 UBN2Q6ZU65 1347 aa18.91■□□□□ 0.62
VPS16-205ENST00000453689 SLX4Q8IY92 1834 aa18.9■□□□□ 0.62
VPS16-205ENST00000453689 FAM177BA6PVY3 158 aa18.9■□□□□ 0.62
VPS16-205ENST00000453689 GPTP24298 496 aa18.9■□□□□ 0.62
VPS16-205ENST00000453689 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
VPS16-205ENST00000453689 ZNF34Q8IZ26 560 aa18.9■□□□□ 0.62
VPS16-205ENST00000453689 BRIP1Q9BX63 1249 aa18.9■□□□□ 0.62
VPS16-205ENST00000453689 BCS1LQ9Y276 419 aa18.9■□□□□ 0.62
VPS16-205ENST00000453689 ZBED9Q6R2W3 1325 aa18.9■□□□□ 0.62
VPS16-205ENST00000453689 CCDC30Q5VVM6 783 aa18.89■□□□□ 0.61
VPS16-205ENST00000453689 TPTE2Q6XPS3 522 aa18.89■□□□□ 0.61
VPS16-205ENST00000453689 C2CD5Q86YS7 1000 aa18.89■□□□□ 0.61
VPS16-205ENST00000453689 YY1P25490 414 aa18.88■□□□□ 0.61
VPS16-205ENST00000453689 PDE6BP35913 854 aa18.88■□□□□ 0.61
VPS16-205ENST00000453689 IBTKQ9P2D0 1353 aaPredicted RBP18.88■□□□□ 0.61
VPS16-205ENST00000453689 DDX60Q8IY21 1712 aaKnown RBP18.88■□□□□ 0.61
VPS16-205ENST00000453689 H0YIN7 160 aa18.87■□□□□ 0.61
VPS16-205ENST00000453689 GOLGA2Q08379 1002 aa18.87■□□□□ 0.61
VPS16-205ENST00000453689 FER1L6Q2WGJ9 1857 aa18.87■□□□□ 0.61
VPS16-205ENST00000453689 DALRD3Q5D0E6 543 aaKnown RBP18.87■□□□□ 0.61
VPS16-205ENST00000453689 SUSD4Q5VX71 490 aa18.87■□□□□ 0.61
VPS16-205ENST00000453689 PLBD2Q8NHP8 589 aa18.87■□□□□ 0.61
VPS16-205ENST00000453689 CHMP4AQ9BY43 222 aa18.87■□□□□ 0.61
VPS16-205ENST00000453689 NYXQ9GZU5 481 aa18.87■□□□□ 0.61
VPS16-205ENST00000453689 PHAXQ9H814 394 aaKnown RBP18.87■□□□□ 0.61
VPS16-205ENST00000453689 PDZRN3Q9UPQ7 1066 aa18.87■□□□□ 0.61
VPS16-205ENST00000453689 ABCC12Q96J65 1359 aa18.86■□□□□ 0.61
VPS16-205ENST00000453689 EXOSC9Q06265 439 aaKnown RBP18.86■□□□□ 0.61
VPS16-205ENST00000453689 HSP90AB3PQ58FF7 597 aa18.86■□□□□ 0.61
VPS16-205ENST00000453689 ANKRD13DQ6ZTN6 518 aa18.86■□□□□ 0.61
VPS16-205ENST00000453689 MYH16Q9H6N6 1097 aa18.86■□□□□ 0.61
VPS16-205ENST00000453689 E9PSI1 815 aa18.85■□□□□ 0.61
VPS16-205ENST00000453689 NTSR2O95665 410 aa18.85■□□□□ 0.61
VPS16-205ENST00000453689 TCIRG1Q13488 830 aa18.85■□□□□ 0.61
VPS16-205ENST00000453689 PARP10Q53GL7 1025 aa18.85■□□□□ 0.61
VPS16-205ENST00000453689 NUTM1Q86Y26 1132 aa18.85■□□□□ 0.61
VPS16-205ENST00000453689 TCERG1O14776 1098 aaKnown RBP18.84■□□□□ 0.61
VPS16-205ENST00000453689 GTF2E1P29083 439 aaPredicted RBP18.84■□□□□ 0.61
VPS16-205ENST00000453689 ERFEQ4G0M1 354 aa18.84■□□□□ 0.61
VPS16-205ENST00000453689 PPP1R42Q7Z4L9 355 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms