RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 C21orf2O43822 256 aa11.85□□□□□ -0.51
DEPDC1B-202ENST00000453022 PDE6BP35913 854 aa11.85□□□□□ -0.51
DEPDC1B-202ENST00000453022 PIP4K2AP48426 406 aaPredicted RBP11.85□□□□□ -0.51
DEPDC1B-202ENST00000453022 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.516e-8■■■□□ 16.1
DEPDC1B-202ENST00000453022 USP16Q9Y5T5 823 aa11.85□□□□□ -0.51
DEPDC1B-202ENST00000453022 NUP98P52948 1817 aa11.85□□□□□ -0.51
DEPDC1B-202ENST00000453022 VEGFAP15692 232 aaPredicted RBP11.84□□□□□ -0.51
DEPDC1B-202ENST00000453022 CNBD1Q8NA66 436 aa11.84□□□□□ -0.51
DEPDC1B-202ENST00000453022 ZNF219Q9P2Y4 722 aaPredicted RBP11.84□□□□□ -0.51
DEPDC1B-202ENST00000453022 PDZRN3Q9UPQ7 1066 aa11.84□□□□□ -0.51
DEPDC1B-202ENST00000453022 MCM10Q7L590 875 aa11.84□□□□□ -0.51
DEPDC1B-202ENST00000453022 DZIP3Q86Y13 1208 aaKnown RBP11.84□□□□□ -0.51
DEPDC1B-202ENST00000453022 CFAP53Q96M91 514 aa11.84□□□□□ -0.51
DEPDC1B-202ENST00000453022 SETDB2Q96T68 719 aa11.84□□□□□ -0.51
DEPDC1B-202ENST00000453022 LTBP3Q9NS15 1303 aa11.83□□□□□ -0.52
DEPDC1B-202ENST00000453022 SCN4AP35499 1836 aa11.83□□□□□ -0.52
DEPDC1B-202ENST00000453022 SRGNP10124 158 aa11.83□□□□□ -0.52
DEPDC1B-202ENST00000453022 PPP2R1AP30153 589 aa11.83□□□□□ -0.52
DEPDC1B-202ENST00000453022 PRPF40BQ6NWY9 871 aaKnown RBP11.83□□□□□ -0.52
DEPDC1B-202ENST00000453022 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
DEPDC1B-202ENST00000453022 STYK1Q6J9G0 422 aa11.82□□□□□ -0.52
DEPDC1B-202ENST00000453022 NBPF26B4DH59 902 aa11.81□□□□□ -0.52
DEPDC1B-202ENST00000453022 U2AF1L5P0DN76 240 aaPredicted RBP11.81□□□□□ -0.52
DEPDC1B-202ENST00000453022 ST5P78524 1137 aa11.81□□□□□ -0.52
DEPDC1B-202ENST00000453022 U2AF1Q01081 240 aaKnown RBP eCLIP11.81□□□□□ -0.52
DEPDC1B-202ENST00000453022 ERFEQ4G0M1 354 aa11.81□□□□□ -0.52
DEPDC1B-202ENST00000453022 NBPF10Q6P3W6 841 aaKnown RBP11.81□□□□□ -0.52
DEPDC1B-202ENST00000453022 NBPF15Q8N660 670 aa11.81□□□□□ -0.52
DEPDC1B-202ENST00000453022 TAOK3Q9H2K8 898 aa11.81□□□□□ -0.52
DEPDC1B-202ENST00000453022 NPHP1O15259 732 aa11.8□□□□□ -0.52
DEPDC1B-202ENST00000453022 SNRPA1P09661 255 aaKnown RBP11.8□□□□□ -0.52
DEPDC1B-202ENST00000453022 NPM2Q86SE8 214 aaKnown RBP11.8□□□□□ -0.52
DEPDC1B-202ENST00000453022 CNKSR1Q969H4 720 aa11.8□□□□□ -0.52
DEPDC1B-202ENST00000453022 MASTLQ96GX5 879 aa11.8□□□□□ -0.52
DEPDC1B-202ENST00000453022 NUDCQ9Y266 331 aa11.8□□□□□ -0.52
DEPDC1B-202ENST00000453022 ADAMTSL1Q8N6G6 1762 aa11.8□□□□□ -0.52
DEPDC1B-202ENST00000453022 COL13A1Q5TAT6 717 aaPredicted RBP11.79□□□□□ -0.52
DEPDC1B-202ENST00000453022 CLEC4GQ6UXB4 293 aa11.79□□□□□ -0.52
DEPDC1B-202ENST00000453022 NBPF5PQ86XG9 351 aaPredicted RBP11.79□□□□□ -0.52
DEPDC1B-202ENST00000453022 RTF1Q92541 710 aaKnown RBP11.79□□□□□ -0.52
DEPDC1B-202ENST00000453022 POTEIP0CG38 1075 aa11.79□□□□□ -0.52
DEPDC1B-202ENST00000453022 POTEJP0CG39 1038 aa11.79□□□□□ -0.52
DEPDC1B-202ENST00000453022 DPY19L2Q6NUT2 758 aa11.79□□□□□ -0.52
DEPDC1B-202ENST00000453022 C7orf43Q8WVR3 580 aa11.79□□□□□ -0.52
DEPDC1B-202ENST00000453022 KLRG2A4D1S0 409 aaPredicted RBP11.78□□□□□ -0.52
DEPDC1B-202ENST00000453022 DDNO94850 711 aaPredicted RBP11.78□□□□□ -0.52
DEPDC1B-202ENST00000453022 ZNF652Q9Y2D9 606 aa11.78□□□□□ -0.52
DEPDC1B-202ENST00000453022 RGL2O15211 777 aa11.77□□□□□ -0.53
DEPDC1B-202ENST00000453022 HTATSF1O43719 755 aaKnown RBP11.77□□□□□ -0.53
DEPDC1B-202ENST00000453022 NPR1P16066 1061 aa11.77□□□□□ -0.53
DEPDC1B-202ENST00000453022 HLFQ16534 295 aa11.77□□□□□ -0.53
DEPDC1B-202ENST00000453022 SOGA3Q5TF21 947 aa11.77□□□□□ -0.53
DEPDC1B-202ENST00000453022 OLFM4Q6UX06 510 aa11.77□□□□□ -0.53
DEPDC1B-202ENST00000453022 MIS18AQ9NYP9 233 aa11.77□□□□□ -0.53
DEPDC1B-202ENST00000453022 NIP7Q9Y221 180 aaKnown RBP eCLIP11.77□□□□□ -0.53
DEPDC1B-202ENST00000453022 SNED1Q8TER0 1413 aa11.77□□□□□ -0.53
DEPDC1B-202ENST00000453022 ABCC12Q96J65 1359 aa11.76□□□□□ -0.53
DEPDC1B-202ENST00000453022 TAF7Q15545 349 aaPredicted RBP11.76□□□□□ -0.53
DEPDC1B-202ENST00000453022 CCDC93Q567U6 631 aa11.76□□□□□ -0.53
DEPDC1B-202ENST00000453022 LAMB2P55268 1798 aa11.76□□□□□ -0.53
DEPDC1B-202ENST00000453022 ANKRD36CQ5JPF3 1778 aa11.76□□□□□ -0.53
DEPDC1B-202ENST00000453022 COL4A5P29400 1685 aa11.76□□□□□ -0.53
DEPDC1B-202ENST00000453022 FAM177BA6PVY3 158 aa11.75□□□□□ -0.53
DEPDC1B-202ENST00000453022 CHADLQ6NUI6 762 aa11.75□□□□□ -0.53
DEPDC1B-202ENST00000453022 ZNF541Q9H0D2 1346 aa11.75□□□□□ -0.53
DEPDC1B-202ENST00000453022 HSPA1AP0DMV8 641 aaKnown RBP11.75□□□□□ -0.53
DEPDC1B-202ENST00000453022 HSPA1BP0DMV9 641 aaKnown RBP11.75□□□□□ -0.53
DEPDC1B-202ENST00000453022 TPTE2Q6XPS3 522 aa11.75□□□□□ -0.53
DEPDC1B-202ENST00000453022 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
DEPDC1B-202ENST00000453022 LTBP1Q14766 1721 aa11.75□□□□□ -0.53
DEPDC1B-202ENST00000453022 FKBP4Q02790 459 aaKnown RBP eCLIP11.74□□□□□ -0.53
DEPDC1B-202ENST00000453022 PLEKHF1Q96S99 279 aa11.74□□□□□ -0.53
DEPDC1B-202ENST00000453022 ZNF277Q9NRM2 450 aaPredicted RBP11.74□□□□□ -0.53
DEPDC1B-202ENST00000453022 RIC1Q4ADV7 1423 aa11.73□□□□□ -0.53
DEPDC1B-202ENST00000453022 THUMPD2Q9BTF0 503 aaKnown RBP11.73□□□□□ -0.53
DEPDC1B-202ENST00000453022 TAF1DQ9H5J8 278 aaPredicted RBP11.73□□□□□ -0.53
DEPDC1B-202ENST00000453022 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
DEPDC1B-202ENST00000453022 MAP3K15Q6ZN16 1313 aa11.72□□□□□ -0.53
DEPDC1B-202ENST00000453022 UBN2Q6ZU65 1347 aa11.72□□□□□ -0.53
DEPDC1B-202ENST00000453022 PASKQ96RG2 1323 aa11.72□□□□□ -0.53
DEPDC1B-202ENST00000453022 IQCA1LA6NCM1 817 aa11.72□□□□□ -0.53
DEPDC1B-202ENST00000453022 EIF4A1P60842 406 aaKnown RBP11.72□□□□□ -0.53
DEPDC1B-202ENST00000453022 CRY2Q49AN0 593 aa11.72□□□□□ -0.53
DEPDC1B-202ENST00000453022 TTLL7Q6ZT98 887 aa11.72□□□□□ -0.53
DEPDC1B-202ENST00000453022 NUTM1Q86Y26 1132 aa11.72□□□□□ -0.53
DEPDC1B-202ENST00000453022 NGEFQ8N5V2 710 aa11.72□□□□□ -0.53
DEPDC1B-202ENST00000453022 IBTKQ9P2D0 1353 aaPredicted RBP11.72□□□□□ -0.53
DEPDC1B-202ENST00000453022 ERVV-1B6SEH8 477 aa11.71□□□□□ -0.53
DEPDC1B-202ENST00000453022 SLC51AQ86UW1 340 aa11.71□□□□□ -0.53
DEPDC1B-202ENST00000453022 LDHDQ86WU2 507 aa11.71□□□□□ -0.53
DEPDC1B-202ENST00000453022 TNS4Q8IZW8 715 aa11.71□□□□□ -0.53
DEPDC1B-202ENST00000453022 MKRN1Q9UHC7 482 aaKnown RBP11.71□□□□□ -0.53
DEPDC1B-202ENST00000453022 ALDH1B1P30837 517 aa11.71□□□□□ -0.54
DEPDC1B-202ENST00000453022 IARSP41252 1262 aaKnown RBP11.71□□□□□ -0.54
DEPDC1B-202ENST00000453022 NFE2L2Q16236 605 aa11.71□□□□□ -0.54
DEPDC1B-202ENST00000453022 RTKN2Q8IZC4 609 aa11.71□□□□□ -0.54
DEPDC1B-202ENST00000453022 PNISRQ8TF01 805 aaKnown RBP11.71□□□□□ -0.54
DEPDC1B-202ENST00000453022 CNTNAP1P78357 1384 aa11.7□□□□□ -0.54
DEPDC1B-202ENST00000453022 FZD9O00144 591 aa11.7□□□□□ -0.54
DEPDC1B-202ENST00000453022 MYL6BP14649 208 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms