RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
PKP4-206ENST00000452162 CASZ1Q86V15 1759 aa13.42□□□□□ -0.26
PKP4-206ENST00000452162 GCC1Q96CN9 775 aa13.42□□□□□ -0.26
PKP4-206ENST00000452162 PRAMEF22A3QJZ6 481 aa13.41□□□□□ -0.26
PKP4-206ENST00000452162 CHD1LQ86WJ1 897 aa13.41□□□□□ -0.26
PKP4-206ENST00000452162 VSIG10Q8N0Z9 540 aa13.41□□□□□ -0.26
PKP4-206ENST00000452162 AK7Q96M32 723 aa13.41□□□□□ -0.26
PKP4-206ENST00000452162 PNPLA7Q6ZV29 1317 aa13.41□□□□□ -0.26
PKP4-206ENST00000452162 ATP10DQ9P241 1426 aa13.4□□□□□ -0.26
PKP4-206ENST00000452162 SOS1Q07889 1333 aaPredicted RBP13.4□□□□□ -0.26
PKP4-206ENST00000452162 GNPATO15228 680 aa13.4□□□□□ -0.26
PKP4-206ENST00000452162 SLC4A2P04920 1241 aa13.4□□□□□ -0.26
PKP4-206ENST00000452162 CRKLP46109 303 aaKnown RBP13.4□□□□□ -0.26
PKP4-206ENST00000452162 CYP19A1P11511 503 aaPredicted RBP13.39□□□□□ -0.27
PKP4-206ENST00000452162 HMGB2P26583 209 aaKnown RBP13.39□□□□□ -0.27
PKP4-206ENST00000452162 EIF4A1P60842 406 aaKnown RBP13.39□□□□□ -0.27
PKP4-206ENST00000452162 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
PKP4-206ENST00000452162 PHF14O94880 888 aa13.39□□□□□ -0.27
PKP4-206ENST00000452162 RC3H1Q5TC82 1133 aaKnown RBP13.39□□□□□ -0.27
PKP4-206ENST00000452162 INTS5Q6P9B9 1019 aaKnown RBP13.39□□□□□ -0.27
PKP4-206ENST00000452162 LNPKQ9C0E8 428 aa13.39□□□□□ -0.27
PKP4-206ENST00000452162 G2E3Q7L622 706 aa13.38□□□□□ -0.27
PKP4-206ENST00000452162 COL23A1Q86Y22 540 aaPredicted RBP13.38□□□□□ -0.27
PKP4-206ENST00000452162 USP16Q9Y5T5 823 aa13.38□□□□□ -0.27
PKP4-206ENST00000452162 SNRPA1P09661 255 aaKnown RBP13.38□□□□□ -0.27
PKP4-206ENST00000452162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.37□□□□□ -0.27
PKP4-206ENST00000452162 ZBTB7AO95365 584 aa13.37□□□□□ -0.27
PKP4-206ENST00000452162 TBC1D32Q96NH3 1257 aa13.37□□□□□ -0.27
PKP4-206ENST00000452162 CCDC87Q9NVE4 849 aa13.37□□□□□ -0.27
PKP4-206ENST00000452162 ZBTB1Q9Y2K1 713 aa13.37□□□□□ -0.27
PKP4-206ENST00000452162 N4BP2Q86UW6 1770 aaPredicted RBP13.37□□□□□ -0.27
PKP4-206ENST00000452162 GIGYF1O75420 1035 aaPredicted RBP13.36□□□□□ -0.27
PKP4-206ENST00000452162 RPS6KA4O75676 772 aa13.36□□□□□ -0.27
PKP4-206ENST00000452162 STARD3NLO95772 234 aa13.36□□□□□ -0.27
PKP4-206ENST00000452162 ANKRD45Q5TZF3 282 aa13.36□□□□□ -0.27
PKP4-206ENST00000452162 ANKRD44Q8N8A2 993 aa13.36□□□□□ -0.27
PKP4-206ENST00000452162 TEX13AQ9BXU3 409 aaPredicted RBP13.36□□□□□ -0.27
PKP4-206ENST00000452162 RTCBQ9Y3I0 505 aaKnown RBP13.36□□□□□ -0.27
PKP4-206ENST00000452162 LAMB4A4D0S4 1761 aa13.36□□□□□ -0.27
PKP4-206ENST00000452162 CACNA1FO60840 1977 aa13.36□□□□□ -0.27
PKP4-206ENST00000452162 A1BGP04217 495 aa13.36□□□□□ -0.27
PKP4-206ENST00000452162 SSFA2P28290 1259 aa13.36□□□□□ -0.27
PKP4-206ENST00000452162 SLC4A3P48751 1232 aa13.36□□□□□ -0.27
PKP4-206ENST00000452162 CCDC30Q5VVM6 783 aa13.36□□□□□ -0.27
PKP4-206ENST00000452162 STK31Q9BXU1 1019 aa13.36□□□□□ -0.27
PKP4-206ENST00000452162 C4AP0C0L4 1744 aa13.35□□□□□ -0.27
PKP4-206ENST00000452162 PIP4K2AP48426 406 aaPredicted RBP13.35□□□□□ -0.27
PKP4-206ENST00000452162 CEP85Q6P2H3 762 aa13.35□□□□□ -0.27
PKP4-206ENST00000452162 MEIS3Q99687 375 aa13.35□□□□□ -0.27
PKP4-206ENST00000452162 UPF2Q9HAU5 1272 aaKnown RBP13.35□□□□□ -0.27
PKP4-206ENST00000452162 CCT4P50991 539 aaKnown RBP13.35□□□□□ -0.27
PKP4-206ENST00000452162 RPAP2Q8IXW5 612 aaPredicted RBP13.35□□□□□ -0.27
PKP4-206ENST00000452162 DCTPP1Q9H773 170 aa13.35□□□□□ -0.27
PKP4-206ENST00000452162 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
PKP4-206ENST00000452162 NBR1Q14596 966 aa13.34□□□□□ -0.27
PKP4-206ENST00000452162 TRAPPC3LQ5T215 181 aa13.34□□□□□ -0.27
PKP4-206ENST00000452162 FLAD1Q8NFF5 587 aa13.34□□□□□ -0.27
PKP4-206ENST00000452162 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
PKP4-206ENST00000452162 F6X3S4 739 aa13.34□□□□□ -0.27
PKP4-206ENST00000452162 BMP2KLQ5H9B9 411 aa13.34□□□□□ -0.27
PKP4-206ENST00000452162 FLIIQ13045 1269 aa13.33□□□□□ -0.28
PKP4-206ENST00000452162 DAXXQ9UER7 740 aaPredicted RBP13.33□□□□□ -0.28
PKP4-206ENST00000452162 PXDNLA1KZ92 1463 aa13.33□□□□□ -0.28
PKP4-206ENST00000452162 MTFR1LQ9H019 292 aa13.32□□□□□ -0.28
PKP4-206ENST00000452162 ADRA2BP18089 450 aa13.32□□□□□ -0.28
PKP4-206ENST00000452162 MSL1Q68DK7 614 aa13.32□□□□□ -0.28
PKP4-206ENST00000452162 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
PKP4-206ENST00000452162 NBPF26B4DH59 902 aa13.31□□□□□ -0.28
PKP4-206ENST00000452162 EIF2S2P20042 333 aaKnown RBP13.31□□□□□ -0.28
PKP4-206ENST00000452162 EIF5P55010 431 aaKnown RBP13.31□□□□□ -0.28
PKP4-206ENST00000452162 NBPF10Q6P3W6 841 aaKnown RBP13.31□□□□□ -0.28
PKP4-206ENST00000452162 NBPF15Q8N660 670 aa13.31□□□□□ -0.28
PKP4-206ENST00000452162 ZNF330Q9Y3S2 320 aaPredicted RBP13.31□□□□□ -0.28
PKP4-206ENST00000452162 COL15A1P39059 1388 aa13.31□□□□□ -0.28
PKP4-206ENST00000452162 COL24A1Q17RW2 1714 aa13.31□□□□□ -0.28
PKP4-206ENST00000452162 HOXB7P09629 217 aa13.31□□□□□ -0.28
PKP4-206ENST00000452162 RFC4P35249 363 aa13.31□□□□□ -0.28
PKP4-206ENST00000452162 SLC4A10Q6U841 1118 aa13.31□□□□□ -0.28
PKP4-206ENST00000452162 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
PKP4-206ENST00000452162 SPON1Q9HCB6 807 aa13.31□□□□□ -0.28
PKP4-206ENST00000452162 SRP68Q9UHB9 627 aaKnown RBP13.31□□□□□ -0.28
PKP4-206ENST00000452162 HDGFL1Q5TGJ6 251 aa13.3□□□□□ -0.28
PKP4-206ENST00000452162 LRP5O75197 1615 aa13.3□□□□□ -0.28
PKP4-206ENST00000452162 IL6STP40189 918 aaPredicted RBP13.3□□□□□ -0.28
PKP4-206ENST00000452162 PTGER2P43116 358 aa13.3□□□□□ -0.28
PKP4-206ENST00000452162 FKBP5Q13451 457 aaPredicted RBP13.3□□□□□ -0.28
PKP4-206ENST00000452162 MFAP1P55081 439 aaKnown RBP13.29□□□□□ -0.28
PKP4-206ENST00000452162 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
PKP4-206ENST00000452162 C22orf23Q9BZE7 217 aa13.29□□□□□ -0.28
PKP4-206ENST00000452162 GYS1P13807 737 aa13.28□□□□□ -0.28
PKP4-206ENST00000452162 BECN1Q14457 450 aa13.28□□□□□ -0.28
PKP4-206ENST00000452162 PLEKHM2Q8IWE5 1019 aa13.28□□□□□ -0.28
PKP4-206ENST00000452162 TBC1D2BQ9UPU7 963 aa13.28□□□□□ -0.28
PKP4-206ENST00000452162 USP42Q9H9J4 1324 aaKnown RBP13.28□□□□□ -0.28
PKP4-206ENST00000452162 ANXA1P04083 346 aa13.28□□□□□ -0.28
PKP4-206ENST00000452162 MYL6BP14649 208 aa13.28□□□□□ -0.28
PKP4-206ENST00000452162 PDIA6Q15084 440 aa13.28□□□□□ -0.28
PKP4-206ENST00000452162 USPL1Q5W0Q7 1092 aa13.28□□□□□ -0.28
PKP4-206ENST00000452162 ARXQ96QS3 562 aa13.28□□□□□ -0.28
PKP4-206ENST00000452162 NARFQ9UHQ1 456 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms