RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 DDX21Q9NR30 783 aaKnown RBP eCLIP9.95□□□□□ -0.82
HDLBP-222ENST00000449504 PDZRN3Q9UPQ7 1066 aa9.95□□□□□ -0.82
HDLBP-222ENST00000449504 ZNF541Q9H0D2 1346 aa9.95□□□□□ -0.82
HDLBP-222ENST00000449504 AFDNP55196 1824 aaKnown RBP9.95□□□□□ -0.82
HDLBP-222ENST00000449504 SLC39A6Q13433 755 aa9.94□□□□□ -0.82
HDLBP-222ENST00000449504 SOGA3Q5TF21 947 aa9.94□□□□□ -0.82
HDLBP-222ENST00000449504 PRR5LQ6MZQ0 368 aa9.94□□□□□ -0.82
HDLBP-222ENST00000449504 ZNF277Q9NRM2 450 aaPredicted RBP9.94□□□□□ -0.82
HDLBP-222ENST00000449504 ZNF330Q9Y3S2 320 aaPredicted RBP9.94□□□□□ -0.82
HDLBP-222ENST00000449504 SOX10P56693 466 aa9.93□□□□□ -0.82
HDLBP-222ENST00000449504 KIF20BQ96Q89 1820 aa9.93□□□□□ -0.82
HDLBP-222ENST00000449504 DLEC1Q9Y238 1755 aa9.93□□□□□ -0.82
HDLBP-222ENST00000449504 TJP1Q07157 1748 aa9.93□□□□□ -0.82
HDLBP-222ENST00000449504 ADAMTS7Q9UKP4 1686 aa9.93□□□□□ -0.82
HDLBP-222ENST00000449504 CCDC93Q567U6 631 aa9.92□□□□□ -0.82
HDLBP-222ENST00000449504 STYK1Q6J9G0 422 aa9.92□□□□□ -0.82
HDLBP-222ENST00000449504 AEBP1Q8IUX7 1158 aa9.92□□□□□ -0.82
HDLBP-222ENST00000449504 MASTLQ96GX5 879 aa9.92□□□□□ -0.82
HDLBP-222ENST00000449504 GJA3Q9Y6H8 435 aa9.92□□□□□ -0.82
HDLBP-222ENST00000449504 NRXN2Q9P2S2 1712 aa9.92□□□□□ -0.82
HDLBP-222ENST00000449504 TRAF5O00463 557 aa9.91□□□□□ -0.82
HDLBP-222ENST00000449504 SRGNP10124 158 aa9.91□□□□□ -0.82
HDLBP-222ENST00000449504 MAP2K2P36507 400 aa9.91□□□□□ -0.82
HDLBP-222ENST00000449504 ST5P78524 1137 aa9.91□□□□□ -0.82
HDLBP-222ENST00000449504 OLFM4Q6UX06 510 aa9.91□□□□□ -0.82
HDLBP-222ENST00000449504 CNBD1Q8NA66 436 aa9.91□□□□□ -0.82
HDLBP-222ENST00000449504 LGR6Q9HBX8 967 aa9.91□□□□□ -0.82
HDLBP-222ENST00000449504 TBC1D2BQ9UPU7 963 aa9.91□□□□□ -0.82
HDLBP-222ENST00000449504 DICER1Q9UPY3 1922 aaKnown RBP9.91□□□□□ -0.82
HDLBP-222ENST00000449504 FER1L6Q2WGJ9 1857 aa9.91□□□□□ -0.82
HDLBP-222ENST00000449504 SCN4AP35499 1836 aa9.91□□□□□ -0.82
HDLBP-222ENST00000449504 A0A087WZG4 1122 aa9.9□□□□□ -0.82
HDLBP-222ENST00000449504 CA12O43570 354 aa9.9□□□□□ -0.82
HDLBP-222ENST00000449504 LMOD1P29536 600 aaPredicted RBP9.9□□□□□ -0.82
HDLBP-222ENST00000449504 FKBP4Q02790 459 aaKnown RBP eCLIP9.9□□□□□ -0.821e-6■■□□□ 12.8
HDLBP-222ENST00000449504 CDCA8Q53HL2 280 aa9.9□□□□□ -0.82
HDLBP-222ENST00000449504 PRPF38BQ5VTL8 546 aaKnown RBP9.9□□□□□ -0.82
HDLBP-222ENST00000449504 CST9Q5W186 159 aa9.9□□□□□ -0.82
HDLBP-222ENST00000449504 SETDB2Q96T68 719 aa9.9□□□□□ -0.82
HDLBP-222ENST00000449504 SLC52A2Q9HAB3 445 aa9.9□□□□□ -0.82
HDLBP-222ENST00000449504 STARD3NLO95772 234 aa9.89□□□□□ -0.83
HDLBP-222ENST00000449504 IARSP41252 1262 aaKnown RBP9.89□□□□□ -0.83
HDLBP-222ENST00000449504 EIF5P55010 431 aaKnown RBP9.89□□□□□ -0.83
HDLBP-222ENST00000449504 SULT6B1Q6IMI4 303 aa9.89□□□□□ -0.83
HDLBP-222ENST00000449504 GPC2Q8N158 579 aa9.89□□□□□ -0.83
HDLBP-222ENST00000449504 SYNE4Q8N205 404 aa9.89□□□□□ -0.83
HDLBP-222ENST00000449504 C7orf43Q8WVR3 580 aa9.89□□□□□ -0.83
HDLBP-222ENST00000449504 TLL2Q9Y6L7 1015 aa9.89□□□□□ -0.83
HDLBP-222ENST00000449504 FZD9O00144 591 aa9.88□□□□□ -0.83
HDLBP-222ENST00000449504 EIF6P56537 245 aaKnown RBP9.88□□□□□ -0.83
HDLBP-222ENST00000449504 CIAPIN1Q6FI81 312 aa9.88□□□□□ -0.83
HDLBP-222ENST00000449504 NPM2Q86SE8 214 aaKnown RBP9.88□□□□□ -0.83
HDLBP-222ENST00000449504 JDP2Q8WYK2 163 aa9.88□□□□□ -0.83
HDLBP-222ENST00000449504 POLR3GLQ9BT43 218 aa9.88□□□□□ -0.83
HDLBP-222ENST00000449504 SLX4Q8IY92 1834 aa9.88□□□□□ -0.83
HDLBP-222ENST00000449504 EPS15P42566 896 aa9.87□□□□□ -0.83
HDLBP-222ENST00000449504 AKAP4Q5JQC9 854 aa9.87□□□□□ -0.83
HDLBP-222ENST00000449504 RTKN2Q8IZC4 609 aa9.87□□□□□ -0.83
HDLBP-222ENST00000449504 ZNF408Q9H9D4 720 aa9.87□□□□□ -0.83
HDLBP-222ENST00000449504 ADAMTSL1Q8N6G6 1762 aa9.87□□□□□ -0.83
HDLBP-222ENST00000449504 COL11A2P13942 1736 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-222ENST00000449504 ANKRD31Q8N7Z5 1873 aa9.87□□□□□ -0.83
HDLBP-222ENST00000449504 RNMTO43148 476 aaKnown RBP9.86□□□□□ -0.83
HDLBP-222ENST00000449504 CELF2O95319 508 aaKnown RBP9.86□□□□□ -0.83
HDLBP-222ENST00000449504 NPR1P16066 1061 aa9.86□□□□□ -0.83
HDLBP-222ENST00000449504 BRPF1P55201 1214 aaPredicted RBP9.86□□□□□ -0.83
HDLBP-222ENST00000449504 SAPCD2Q86UD0 394 aa9.86□□□□□ -0.83
HDLBP-222ENST00000449504 VSIG10Q8N0Z9 540 aa9.86□□□□□ -0.83
HDLBP-222ENST00000449504 ANKRD26Q9UPS8 1709 aa9.86□□□□□ -0.83
HDLBP-222ENST00000449504 FAM177BA6PVY3 158 aa9.85□□□□□ -0.83
HDLBP-222ENST00000449504 USP50Q70EL3 339 aaPredicted RBP9.85□□□□□ -0.83
HDLBP-222ENST00000449504 NBPF5PQ86XG9 351 aaPredicted RBP9.85□□□□□ -0.83
HDLBP-222ENST00000449504 TTC5Q8N0Z6 440 aa9.85□□□□□ -0.83
HDLBP-222ENST00000449504 ZIC5Q96T25 663 aa9.85□□□□□ -0.83
HDLBP-222ENST00000449504 THSD7BQ9C0I4 1608 aa9.85□□□□□ -0.83
HDLBP-222ENST00000449504 LTBP1Q14766 1721 aa9.85□□□□□ -0.83
HDLBP-222ENST00000449504 CASP8AP2Q9UKL3 1982 aa9.84□□□□□ -0.83
HDLBP-222ENST00000449504 CAMTA2O94983 1202 aa9.84□□□□□ -0.83
HDLBP-222ENST00000449504 A1BGP04217 495 aa9.84□□□□□ -0.83
HDLBP-222ENST00000449504 SCNN1DP51172 638 aa9.84□□□□□ -0.83
HDLBP-222ENST00000449504 GLIS2Q9BZE0 524 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-222ENST00000449504 CACNA1SQ13698 1873 aa9.83□□□□□ -0.84
HDLBP-222ENST00000449504 IL6STP40189 918 aaPredicted RBP9.83□□□□□ -0.84
HDLBP-222ENST00000449504 CHRDL2Q6WN34 429 aa9.83□□□□□ -0.84
HDLBP-222ENST00000449504 ALDH1B1P30837 517 aa9.82□□□□□ -0.84
HDLBP-222ENST00000449504 DZIP3Q86Y13 1208 aaKnown RBP9.82□□□□□ -0.84
HDLBP-222ENST00000449504 LARGE2Q8N3Y3 721 aa9.82□□□□□ -0.84
HDLBP-222ENST00000449504 ZNF496Q96IT1 587 aaPredicted RBP9.82□□□□□ -0.84
HDLBP-222ENST00000449504 TEX13AQ9BXU3 409 aaPredicted RBP9.82□□□□□ -0.84
HDLBP-222ENST00000449504 TNRC18O15417 2968 aaPredicted RBP9.81□□□□□ -0.84
HDLBP-222ENST00000449504 TCERG1O14776 1098 aaKnown RBP9.81□□□□□ -0.84
HDLBP-222ENST00000449504 HMOX1P09601 288 aa9.81□□□□□ -0.84
HDLBP-222ENST00000449504 GTF2E1P29083 439 aaPredicted RBP9.81□□□□□ -0.84
HDLBP-222ENST00000449504 PIP4K2AP48426 406 aaPredicted RBP9.81□□□□□ -0.84
HDLBP-222ENST00000449504 NOGQ13253 232 aa9.81□□□□□ -0.84
HDLBP-222ENST00000449504 TPTE2Q6XPS3 522 aa9.81□□□□□ -0.84
HDLBP-222ENST00000449504 NBPF15Q8N660 670 aa9.81□□□□□ -0.84
HDLBP-222ENST00000449504 HHIPL1Q96JK4 782 aa9.81□□□□□ -0.84
HDLBP-222ENST00000449504 ADARB2Q9NS39 739 aaKnown RBP9.81□□□□□ -0.84
HDLBP-222ENST00000449504 TRPA1O75762 1119 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms