RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 ANKRD45Q5TZF3 282 aa12.06□□□□□ -0.48
RFC4-210ENST00000449502 SMC5Q8IY18 1101 aa12.06□□□□□ -0.48
RFC4-210ENST00000449502 SLC4A9Q96Q91 983 aa12.06□□□□□ -0.48
RFC4-210ENST00000449502 BCL11BQ9C0K0 894 aaPredicted RBP12.06□□□□□ -0.48
RFC4-210ENST00000449502 CWC25Q9NXE8 425 aaPredicted RBP12.06□□□□□ -0.48
RFC4-210ENST00000449502 CCNL1Q9UK58 526 aaPredicted RBP12.06□□□□□ -0.48
RFC4-210ENST00000449502 ZBTB1Q9Y2K1 713 aa12.06□□□□□ -0.48
RFC4-210ENST00000449502 GLI3P10071 1580 aa12.05□□□□□ -0.48
RFC4-210ENST00000449502 WNK3Q9BYP7 1800 aa12.05□□□□□ -0.48
RFC4-210ENST00000449502 ATP8B2P98198 1209 aa12.05□□□□□ -0.48
RFC4-210ENST00000449502 GCKRQ14397 625 aa12.05□□□□□ -0.48
RFC4-210ENST00000449502 DZIP3Q86Y13 1208 aaKnown RBP12.05□□□□□ -0.48
RFC4-210ENST00000449502 TOGARAM1Q9Y4F4 1720 aa12.05□□□□□ -0.48
RFC4-210ENST00000449502 MAP3K15Q6ZN16 1313 aa12.05□□□□□ -0.48
RFC4-210ENST00000449502 IGKV5-2P06315 115 aa12.04□□□□□ -0.48
RFC4-210ENST00000449502 NBPF7P0C2Y1 421 aaPredicted RBP12.04□□□□□ -0.48
RFC4-210ENST00000449502 TCIRG1Q13488 830 aa12.04□□□□□ -0.48
RFC4-210ENST00000449502 ITPK1Q13572 414 aa12.04□□□□□ -0.48
RFC4-210ENST00000449502 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
RFC4-210ENST00000449502 DCTPP1Q9H773 170 aa12.04□□□□□ -0.48
RFC4-210ENST00000449502 THSD7AQ9UPZ6 1657 aa12.03□□□□□ -0.48
RFC4-210ENST00000449502 ERVV-1B6SEH8 477 aa12.03□□□□□ -0.48
RFC4-210ENST00000449502 SRGAP3O43295 1099 aa12.03□□□□□ -0.48
RFC4-210ENST00000449502 NUCB1Q02818 461 aa12.03□□□□□ -0.48
RFC4-210ENST00000449502 HSP90AB4PQ58FF6 505 aa12.03□□□□□ -0.48
RFC4-210ENST00000449502 INTS5Q6P9B9 1019 aaKnown RBP12.03□□□□□ -0.48
RFC4-210ENST00000449502 PPP1R42Q7Z4L9 355 aa12.03□□□□□ -0.48
RFC4-210ENST00000449502 CHD1LQ86WJ1 897 aa12.03□□□□□ -0.48
RFC4-210ENST00000449502 CCDC191Q8NCU4 936 aa12.03□□□□□ -0.48
RFC4-210ENST00000449502 PAPPAQ13219 1627 aa12.03□□□□□ -0.48
RFC4-210ENST00000449502 IBTKQ9P2D0 1353 aaPredicted RBP12.03□□□□□ -0.48
RFC4-210ENST00000449502 APBB1O00213 710 aa12.02□□□□□ -0.49
RFC4-210ENST00000449502 TRIM37O94972 964 aa12.02□□□□□ -0.49
RFC4-210ENST00000449502 OS9Q13438 667 aaPredicted RBP12.02□□□□□ -0.49
RFC4-210ENST00000449502 UBE3BQ7Z3V4 1068 aa12.02□□□□□ -0.49
RFC4-210ENST00000449502 SUCLG2Q96I99 432 aa12.02□□□□□ -0.49
RFC4-210ENST00000449502 LNPKQ9C0E8 428 aa12.02□□□□□ -0.49
RFC4-210ENST00000449502 BCL11AQ9H165 835 aa12.02□□□□□ -0.49
RFC4-210ENST00000449502 TBC1D2BQ9UPU7 963 aa12.02□□□□□ -0.49
RFC4-210ENST00000449502 ZNF652Q9Y2D9 606 aa12.02□□□□□ -0.49
RFC4-210ENST00000449502 UTYO14607 1347 aa12.02□□□□□ -0.49
RFC4-210ENST00000449502 DOT1LQ8TEK3 1739 aa12.02□□□□□ -0.49
RFC4-210ENST00000449502 RAB11FIP3O75154 756 aa12.01□□□□□ -0.49
RFC4-210ENST00000449502 EIF5P55010 431 aaKnown RBP12.01□□□□□ -0.49
RFC4-210ENST00000449502 RC3H1Q5TC82 1133 aaKnown RBP12.01□□□□□ -0.49
RFC4-210ENST00000449502 GIGYF2Q6Y7W6 1299 aaKnown RBP12.01□□□□□ -0.49
RFC4-210ENST00000449502 PTF1AQ7RTS3 328 aa12.01□□□□□ -0.49
RFC4-210ENST00000449502 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
RFC4-210ENST00000449502 CNTNAP4Q9C0A0 1308 aa12.01□□□□□ -0.49
RFC4-210ENST00000449502 C5P01031 1676 aa12□□□□□ -0.49
RFC4-210ENST00000449502 PNMA6EA0A0J9YXQ4 647 aa12□□□□□ -0.49
RFC4-210ENST00000449502 SURF6O75683 361 aaKnown RBP12□□□□□ -0.49
RFC4-210ENST00000449502 TRIM28Q13263 835 aaKnown RBP12□□□□□ -0.49
RFC4-210ENST00000449502 SKAP1Q86WV1 359 aa12□□□□□ -0.49
RFC4-210ENST00000449502 AK7Q96M32 723 aa12□□□□□ -0.49
RFC4-210ENST00000449502 ISCA1Q9BUE6 129 aa12□□□□□ -0.49
RFC4-210ENST00000449502 CHMP3Q9Y3E7 222 aa12□□□□□ -0.49
RFC4-210ENST00000449502 RTCBQ9Y3I0 505 aaKnown RBP12□□□□□ -0.49
RFC4-210ENST00000449502 H7C1W4 665 aa11.99□□□□□ -0.49
RFC4-210ENST00000449502 GNPATO15228 680 aa11.99□□□□□ -0.49
RFC4-210ENST00000449502 SLC27A3Q5K4L6 730 aa11.99□□□□□ -0.49
RFC4-210ENST00000449502 ERC1Q8IUD2 1116 aa11.99□□□□□ -0.49
RFC4-210ENST00000449502 SSH3Q8TE77 659 aa11.99□□□□□ -0.49
RFC4-210ENST00000449502 JARID2Q92833 1246 aaPredicted RBP11.99□□□□□ -0.49
RFC4-210ENST00000449502 LRRCC1Q9C099 1032 aa11.99□□□□□ -0.49
RFC4-210ENST00000449502 BICC1Q9H694 974 aaKnown RBP11.99□□□□□ -0.49
RFC4-210ENST00000449502 EXOC6BQ9Y2D4 811 aa11.99□□□□□ -0.49
RFC4-210ENST00000449502 UBR2Q8IWV8 1755 aa11.99□□□□□ -0.49
RFC4-210ENST00000449502 LAMB4A4D0S4 1761 aa11.98□□□□□ -0.49
RFC4-210ENST00000449502 ZPR1O75312 459 aa11.98□□□□□ -0.49
RFC4-210ENST00000449502 RPS6KA4O75676 772 aa11.98□□□□□ -0.49
RFC4-210ENST00000449502 HSP90B1P14625 803 aaKnown RBP11.98□□□□□ -0.49
RFC4-210ENST00000449502 GPTP24298 496 aa11.98□□□□□ -0.49
RFC4-210ENST00000449502 KCNQ4P56696 695 aa11.98□□□□□ -0.49
RFC4-210ENST00000449502 G3BP1Q13283 466 aaKnown RBP eCLIP11.98□□□□□ -0.49
RFC4-210ENST00000449502 MTX1Q13505 466 aa11.98□□□□□ -0.49
RFC4-210ENST00000449502 POLA2Q14181 598 aa11.98□□□□□ -0.49
RFC4-210ENST00000449502 HLFQ16534 295 aa11.98□□□□□ -0.49
RFC4-210ENST00000449502 ZBTB38Q8NAP3 1195 aaPredicted RBP11.98□□□□□ -0.49
RFC4-210ENST00000449502 VIRMAQ69YN4 1812 aaKnown RBP11.97□□□□□ -0.49
RFC4-210ENST00000449502 COL15A1P39059 1388 aa11.97□□□□□ -0.49
RFC4-210ENST00000449502 APBA3O96018 575 aa11.97□□□□□ -0.49
RFC4-210ENST00000449502 PCCAP05165 728 aaPredicted RBP11.97□□□□□ -0.49
RFC4-210ENST00000449502 FAM161AQ3B820 660 aa11.97□□□□□ -0.49
RFC4-210ENST00000449502 PARP10Q53GL7 1025 aa11.97□□□□□ -0.49
RFC4-210ENST00000449502 RTL5Q5HYW3 569 aaPredicted RBP11.97□□□□□ -0.49
RFC4-210ENST00000449502 KIF1BPQ96EK5 621 aa11.97□□□□□ -0.49
RFC4-210ENST00000449502 TRMT112Q9UI30 125 aaKnown RBP11.97□□□□□ -0.49
RFC4-210ENST00000449502 CAMTA2O94983 1202 aa11.96□□□□□ -0.49
RFC4-210ENST00000449502 RFC4P35249 363 aa11.96□□□□□ -0.49
RFC4-210ENST00000449502 TAF7LQ5H9L4 462 aa11.96□□□□□ -0.49
RFC4-210ENST00000449502 TRAPPC3LQ5T215 181 aa11.96□□□□□ -0.49
RFC4-210ENST00000449502 POTEAQ6S8J7 498 aa11.96□□□□□ -0.49
RFC4-210ENST00000449502 NLRP10Q86W26 655 aa11.96□□□□□ -0.49
RFC4-210ENST00000449502 UTP14AQ9BVJ6 771 aaKnown RBP11.96□□□□□ -0.49
RFC4-210ENST00000449502 RGL2O15211 777 aa11.95□□□□□ -0.5
RFC4-210ENST00000449502 SMARCA5O60264 1052 aaPredicted RBP11.95□□□□□ -0.5
RFC4-210ENST00000449502 PDE4AP27815 886 aa11.95□□□□□ -0.5
RFC4-210ENST00000449502 LMBR1LQ6UX01 489 aa11.95□□□□□ -0.5
RFC4-210ENST00000449502 CLEC4GQ6UXB4 293 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms