RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 NBPF5PQ86XG9 351 aaPredicted RBP20.67■□□□□ 0.9
TRA2A-203ENST00000448549 NBPF15Q8N660 670 aa20.67■□□□□ 0.9
TRA2A-203ENST00000448549 CNKSR1Q969H4 720 aa20.67■□□□□ 0.9
TRA2A-203ENST00000448549 MIS18AQ9NYP9 233 aa20.67■□□□□ 0.9
TRA2A-203ENST00000448549 SBF1O95248 1867 aa20.67■□□□□ 0.9
TRA2A-203ENST00000448549 ERFEQ4G0M1 354 aa20.66■□□□□ 0.9
TRA2A-203ENST00000448549 DPY19L2Q6NUT2 758 aa20.66■□□□□ 0.9
TRA2A-203ENST00000448549 KLRG1Q96E93 195 aa20.66■□□□□ 0.9
TRA2A-203ENST00000448549 ZNF652Q9Y2D9 606 aa20.66■□□□□ 0.9
TRA2A-203ENST00000448549 PRPF40BQ6NWY9 871 aaKnown RBP20.65■□□□□ 0.9
TRA2A-203ENST00000448549 MASTLQ96GX5 879 aa20.65■□□□□ 0.9
TRA2A-203ENST00000448549 POTECB2RU33 542 aa20.64■□□□□ 0.89
TRA2A-203ENST00000448549 TAOK3Q9H2K8 898 aa20.64■□□□□ 0.89
TRA2A-203ENST00000448549 ANKRD31Q8N7Z5 1873 aa20.64■□□□□ 0.89
TRA2A-203ENST00000448549 TNRC6CQ9HCJ0 1690 aaKnown RBP20.64■□□□□ 0.89
TRA2A-203ENST00000448549 NIP7Q9Y221 180 aaKnown RBP eCLIP20.63■□□□□ 0.89
TRA2A-203ENST00000448549 LTBP3Q9NS15 1303 aa20.62■□□□□ 0.89
TRA2A-203ENST00000448549 NEFMP07197 916 aa20.62■□□□□ 0.89
TRA2A-203ENST00000448549 TPTE2Q6XPS3 522 aa20.62■□□□□ 0.89
TRA2A-203ENST00000448549 FAM177BA6PVY3 158 aa20.61■□□□□ 0.89
TRA2A-203ENST00000448549 HLFQ16534 295 aa20.61■□□□□ 0.89
TRA2A-203ENST00000448549 SOGA3Q5TF21 947 aa20.61■□□□□ 0.89
TRA2A-203ENST00000448549 COL11A2P13942 1736 aaPredicted RBP20.61■□□□□ 0.89
TRA2A-203ENST00000448549 WDR90Q96KV7 1748 aa20.61■□□□□ 0.89
TRA2A-203ENST00000448549 RGL2O15211 777 aa20.6■□□□□ 0.89
TRA2A-203ENST00000448549 JMYQ8N9B5 988 aa20.6■□□□□ 0.89
TRA2A-203ENST00000448549 C7orf43Q8WVR3 580 aa20.6■□□□□ 0.89
TRA2A-203ENST00000448549 KLRG2A4D1S0 409 aaPredicted RBP20.59■□□□□ 0.89
TRA2A-203ENST00000448549 NPR1P16066 1061 aa20.59■□□□□ 0.89
TRA2A-203ENST00000448549 NGEFQ8N5V2 710 aa20.59■□□□□ 0.89
TRA2A-203ENST00000448549 PNISRQ8TF01 805 aaKnown RBP20.59■□□□□ 0.89
TRA2A-203ENST00000448549 PLEKHF1Q96S99 279 aa20.59■□□□□ 0.89
TRA2A-203ENST00000448549 DDNO94850 711 aaPredicted RBP20.58■□□□□ 0.89
TRA2A-203ENST00000448549 THUMPD2Q9BTF0 503 aaKnown RBP20.58■□□□□ 0.89
TRA2A-203ENST00000448549 BCORQ6W2J9 1755 aa20.57■□□□□ 0.88
TRA2A-203ENST00000448549 NFE2L2Q16236 605 aa20.57■□□□□ 0.88
TRA2A-203ENST00000448549 TIAM2Q8IVF5 1701 aa20.57■□□□□ 0.88
TRA2A-203ENST00000448549 GTF2E1P29083 439 aaPredicted RBP20.56■□□□□ 0.88
TRA2A-203ENST00000448549 EIF4A1P60842 406 aaKnown RBP20.56■□□□□ 0.88
TRA2A-203ENST00000448549 CCDC93Q567U6 631 aa20.56■□□□□ 0.88
TRA2A-203ENST00000448549 RRP7AQ9Y3A4 280 aaKnown RBP20.56■□□□□ 0.88
TRA2A-203ENST00000448549 OLFM4Q6UX06 510 aa20.55■□□□□ 0.88
TRA2A-203ENST00000448549 SLX4Q8IY92 1834 aa20.55■□□□□ 0.88
TRA2A-203ENST00000448549 ERVV-1B6SEH8 477 aa20.53■□□□□ 0.88
TRA2A-203ENST00000448549 POTEIP0CG38 1075 aa20.53■□□□□ 0.88
TRA2A-203ENST00000448549 POTEJP0CG39 1038 aa20.53■□□□□ 0.88
TRA2A-203ENST00000448549 MYL6BP14649 208 aa20.53■□□□□ 0.88
TRA2A-203ENST00000448549 FKBP4Q02790 459 aaKnown RBP eCLIP20.53■□□□□ 0.88
TRA2A-203ENST00000448549 TTLL7Q6ZT98 887 aa20.53■□□□□ 0.88
TRA2A-203ENST00000448549 ZNF277Q9NRM2 450 aaPredicted RBP20.53■□□□□ 0.88
TRA2A-203ENST00000448549 MAPK8IP3Q9UPT6 1336 aa20.53■□□□□ 0.88
TRA2A-203ENST00000448549 FER1L6Q2WGJ9 1857 aa20.52■□□□□ 0.88
TRA2A-203ENST00000448549 ALDH1B1P30837 517 aa20.52■□□□□ 0.88
TRA2A-203ENST00000448549 CHADLQ6NUI6 762 aa20.52■□□□□ 0.88
TRA2A-203ENST00000448549 NUTM1Q86Y26 1132 aa20.52■□□□□ 0.88
TRA2A-203ENST00000448549 PNNQ9H307 717 aaKnown RBP20.52■□□□□ 0.88
TRA2A-203ENST00000448549 MAP3K15Q6ZN16 1313 aa20.52■□□□□ 0.87
TRA2A-203ENST00000448549 KIF6Q6ZMV9 814 aa20.51■□□□□ 0.87
TRA2A-203ENST00000448549 RTKN2Q8IZC4 609 aa20.51■□□□□ 0.87
TRA2A-203ENST00000448549 NYXQ9GZU5 481 aa20.51■□□□□ 0.87
TRA2A-203ENST00000448549 GPTP24298 496 aa20.5■□□□□ 0.87
TRA2A-203ENST00000448549 COL13A1Q5TAT6 717 aaPredicted RBP20.5■□□□□ 0.87
TRA2A-203ENST00000448549 ZBTB3Q9H5J0 574 aa20.5■□□□□ 0.87
TRA2A-203ENST00000448549 CCDC88AQ3V6T2 1871 aa20.5■□□□□ 0.87
TRA2A-203ENST00000448549 ABCC12Q96J65 1359 aa20.49■□□□□ 0.87
TRA2A-203ENST00000448549 CRY2Q49AN0 593 aa20.49■□□□□ 0.87
TRA2A-203ENST00000448549 IQCA1LA6NCM1 817 aa20.48■□□□□ 0.87
TRA2A-203ENST00000448549 SYNE4Q8N205 404 aa20.48■□□□□ 0.87
TRA2A-203ENST00000448549 L3MBTL3Q96JM7 780 aaPredicted RBP20.48■□□□□ 0.87
TRA2A-203ENST00000448549 UBN2Q6ZU65 1347 aa20.48■□□□□ 0.87
TRA2A-203ENST00000448549 ZNF541Q9H0D2 1346 aa20.48■□□□□ 0.87
TRA2A-203ENST00000448549 SUSD4Q5VX71 490 aa20.47■□□□□ 0.87
TRA2A-203ENST00000448549 TAF1DQ9H5J8 278 aaPredicted RBP20.47■□□□□ 0.87
TRA2A-203ENST00000448549 TSPYL4Q9UJ04 414 aa20.47■□□□□ 0.87
TRA2A-203ENST00000448549 IARSP41252 1262 aaKnown RBP20.46■□□□□ 0.87
TRA2A-203ENST00000448549 RIPK4P57078 832 aa20.46■□□□□ 0.87
TRA2A-203ENST00000448549 LDHDQ86WU2 507 aa20.45■□□□□ 0.86
TRA2A-203ENST00000448549 ZNF34Q8IZ26 560 aa20.45■□□□□ 0.86
TRA2A-203ENST00000448549 RPGRQ92834 1020 aaKnown RBP20.45■□□□□ 0.86
TRA2A-203ENST00000448549 CREBZFQ9NS37 354 aa20.45■□□□□ 0.86
TRA2A-203ENST00000448549 KDM3BQ7LBC6 1761 aa20.44■□□□□ 0.86
TRA2A-203ENST00000448549 ARFGEF2Q9Y6D5 1785 aa20.44■□□□□ 0.86
TRA2A-203ENST00000448549 EIF2S2P20042 333 aaKnown RBP20.44■□□□□ 0.86
TRA2A-203ENST00000448549 HOXA10P31260 410 aaPredicted RBP20.44■□□□□ 0.86
TRA2A-203ENST00000448549 GIGYF2Q6Y7W6 1299 aaKnown RBP20.44■□□□□ 0.86
TRA2A-203ENST00000448549 DICER1Q9UPY3 1922 aaKnown RBP20.44■□□□□ 0.86
TRA2A-203ENST00000448549 ERBB4Q15303 1308 aa20.44■□□□□ 0.86
TRA2A-203ENST00000448549 LAMB4A4D0S4 1761 aa20.44■□□□□ 0.86
TRA2A-203ENST00000448549 FZD9O00144 591 aa20.43■□□□□ 0.86
TRA2A-203ENST00000448549 HSPA1AP0DMV8 641 aaKnown RBP20.43■□□□□ 0.86
TRA2A-203ENST00000448549 HSPA1BP0DMV9 641 aaKnown RBP20.43■□□□□ 0.86
TRA2A-203ENST00000448549 PDIA6Q15084 440 aa20.43■□□□□ 0.86
TRA2A-203ENST00000448549 RALBP1Q15311 655 aa20.43■□□□□ 0.86
TRA2A-203ENST00000448549 EAPPQ56P03 285 aaPredicted RBP20.43■□□□□ 0.86
TRA2A-203ENST00000448549 PSMD1Q99460 953 aa20.43■□□□□ 0.86
TRA2A-203ENST00000448549 MKRN1Q9UHC7 482 aaKnown RBP20.43■□□□□ 0.86
TRA2A-203ENST00000448549 HACL1Q9UJ83 578 aa20.43■□□□□ 0.86
TRA2A-203ENST00000448549 CACNA1SQ13698 1873 aa20.43■□□□□ 0.86
TRA2A-203ENST00000448549 NTSR2O95665 410 aa20.42■□□□□ 0.86
TRA2A-203ENST00000448549 CC2D2BQ6DHV5 1058 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms