RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ADGRB2O60241 1585 aa8.21□□□□□ -1.1
SDCBP-205ENST00000447267 NPHP3Q7Z494 1330 aa8.21□□□□□ -1.1
SDCBP-205ENST00000447267 PLEKHG3A1L390 1219 aa8.2□□□□□ -1.1
SDCBP-205ENST00000447267 C11orf95C9JLR9 678 aaPredicted RBP8.2□□□□□ -1.1
SDCBP-205ENST00000447267 TOMM70O94826 608 aa8.2□□□□□ -1.1
SDCBP-205ENST00000447267 BMP1P13497 986 aa8.2□□□□□ -1.1
SDCBP-205ENST00000447267 KDM4CQ9H3R0 1056 aa8.2□□□□□ -1.1
SDCBP-205ENST00000447267 SPATA31A5Q5VU36 1347 aa8.2□□□□□ -1.1
SDCBP-205ENST00000447267 SPATA31A7Q8IWB4 1347 aa8.2□□□□□ -1.1
SDCBP-205ENST00000447267 RREB1Q92766 1687 aa8.2□□□□□ -1.1
SDCBP-205ENST00000447267 MAP3K5Q99683 1374 aa8.2□□□□□ -1.1
SDCBP-205ENST00000447267 TSPY4P0CV99 314 aa8.19□□□□□ -1.1
SDCBP-205ENST00000447267 TSPY10P0CW01 314 aa8.19□□□□□ -1.1
SDCBP-205ENST00000447267 TSC1Q92574 1164 aa8.19□□□□□ -1.1
SDCBP-205ENST00000447267 TMEM131LA2VDJ0 1609 aa8.18□□□□□ -1.1
SDCBP-205ENST00000447267 CASZ1Q86V15 1759 aa8.18□□□□□ -1.1
SDCBP-205ENST00000447267 SLC24A1O60721 1099 aa8.18□□□□□ -1.1
SDCBP-205ENST00000447267 PTF1AQ7RTS3 328 aa8.18□□□□□ -1.1
SDCBP-205ENST00000447267 PROCA1Q8NCQ7 364 aaPredicted RBP8.18□□□□□ -1.1
SDCBP-205ENST00000447267 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.18□□□□□ -1.1
SDCBP-205ENST00000447267 TRIM47Q96LD4 638 aa8.18□□□□□ -1.1
SDCBP-205ENST00000447267 SLC52A1Q9NWF4 448 aa8.18□□□□□ -1.1
SDCBP-205ENST00000447267 STK32BQ9NY57 414 aa8.18□□□□□ -1.1
SDCBP-205ENST00000447267 SPATA31A3Q5VYP0 1347 aa8.18□□□□□ -1.1
SDCBP-205ENST00000447267 ADCY9O60503 1353 aa8.18□□□□□ -1.1
SDCBP-205ENST00000447267 RPRD2Q5VT52 1461 aaKnown RBP8.18□□□□□ -1.1
SDCBP-205ENST00000447267 PXDNQ92626 1479 aa8.18□□□□□ -1.1
SDCBP-205ENST00000447267 CEP152O94986 1710 aa8.17□□□□□ -1.1
SDCBP-205ENST00000447267 MARF1Q9Y4F3 1742 aaKnown RBP8.17□□□□□ -1.1
SDCBP-205ENST00000447267 VARSP26640 1264 aaKnown RBP8.17□□□□□ -1.1
SDCBP-205ENST00000447267 PDE3BQ13370 1112 aa8.17□□□□□ -1.1
SDCBP-205ENST00000447267 SLC15A2Q16348 729 aa8.17□□□□□ -1.1
SDCBP-205ENST00000447267 TREML4Q6UXN2 200 aa8.17□□□□□ -1.1
SDCBP-205ENST00000447267 ABHD8Q96I13 439 aa8.17□□□□□ -1.1
SDCBP-205ENST00000447267 METP08581 1390 aa8.16□□□□□ -1.1
SDCBP-205ENST00000447267 LAMC1P11047 1609 aa8.16□□□□□ -1.1
SDCBP-205ENST00000447267 CTDSPL2Q05D32 466 aa8.16□□□□□ -1.1
SDCBP-205ENST00000447267 NFX1Q12986 1120 aaKnown RBP8.16□□□□□ -1.1
SDCBP-205ENST00000447267 MPNDQ8N594 471 aa8.16□□□□□ -1.1
SDCBP-205ENST00000447267 KLF16Q9BXK1 252 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-205ENST00000447267 WASF2Q9Y6W5 498 aa8.16□□□□□ -1.1
SDCBP-205ENST00000447267 EHBP1L1Q8N3D4 1523 aa8.15□□□□□ -1.1
SDCBP-205ENST00000447267 CCDC18Q5T9S5 1454 aa8.15□□□□□ -1.1
SDCBP-205ENST00000447267 USP19O94966 1318 aa8.15□□□□□ -1.1
SDCBP-205ENST00000447267 CCDC85CA6NKD9 419 aa8.15□□□□□ -1.1
SDCBP-205ENST00000447267 CAPN5O15484 640 aaPredicted RBP8.15□□□□□ -1.1
SDCBP-205ENST00000447267 RGS19P49795 217 aa8.15□□□□□ -1.1
SDCBP-205ENST00000447267 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
SDCBP-205ENST00000447267 ADGRL2O95490 1459 aa8.14□□□□□ -1.11
SDCBP-205ENST00000447267 CCDC141Q6ZP82 1450 aa8.14□□□□□ -1.11
SDCBP-205ENST00000447267 PLSCR1O15162 318 aa8.14□□□□□ -1.11
SDCBP-205ENST00000447267 NR3C2P08235 984 aa8.14□□□□□ -1.11
SDCBP-205ENST00000447267 NNTQ13423 1086 aa8.14□□□□□ -1.11
SDCBP-205ENST00000447267 KRT28Q7Z3Y7 464 aa8.14□□□□□ -1.11
SDCBP-205ENST00000447267 LRRN4Q8WUT4 740 aa8.14□□□□□ -1.11
SDCBP-205ENST00000447267 CDK15Q96Q40 435 aa8.14□□□□□ -1.11
SDCBP-205ENST00000447267 C1QTNF2Q9BXJ5 285 aa8.14□□□□□ -1.11
SDCBP-205ENST00000447267 NMRK2Q9NPI5 230 aa8.14□□□□□ -1.11
SDCBP-205ENST00000447267 USP35Q9P2H5 1018 aa8.14□□□□□ -1.11
SDCBP-205ENST00000447267 FOXN1O15353 648 aa8.13□□□□□ -1.11
SDCBP-205ENST00000447267 TIMP2P16035 220 aa8.13□□□□□ -1.11
SDCBP-205ENST00000447267 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
SDCBP-205ENST00000447267 SH3BP5LQ7L8J4 393 aa8.13□□□□□ -1.11
SDCBP-205ENST00000447267 SH3RF1Q7Z6J0 888 aa8.13□□□□□ -1.11
SDCBP-205ENST00000447267 RSPH6AQ9H0K4 717 aa8.13□□□□□ -1.11
SDCBP-205ENST00000447267 USP32Q8NFA0 1604 aa8.12□□□□□ -1.11
SDCBP-205ENST00000447267 ADH1CP00326 375 aa8.12□□□□□ -1.11
SDCBP-205ENST00000447267 GRM5P41594 1212 aa8.12□□□□□ -1.11
SDCBP-205ENST00000447267 SKIV2LQ15477 1246 aaKnown RBP8.12□□□□□ -1.11
SDCBP-205ENST00000447267 FAM174AQ8TBP5 190 aa8.12□□□□□ -1.11
SDCBP-205ENST00000447267 ABCC5O15440 1437 aa8.12□□□□□ -1.11
SDCBP-205ENST00000447267 SPATA31A1Q5TZJ5 1347 aa8.11□□□□□ -1.11
SDCBP-205ENST00000447267 ZFAND3Q9H8U3 227 aa8.11□□□□□ -1.11
SDCBP-205ENST00000447267 WDR90Q96KV7 1748 aa8.11□□□□□ -1.11
SDCBP-205ENST00000447267 UBTFP17480 764 aaKnown RBP8.1□□□□□ -1.11
SDCBP-205ENST00000447267 TXNRD1Q16881 649 aa8.1□□□□□ -1.11
SDCBP-205ENST00000447267 PPP2R2DQ66LE6 453 aa8.1□□□□□ -1.11
SDCBP-205ENST00000447267 HELBQ8NG08 1087 aaPredicted RBP8.1□□□□□ -1.11
SDCBP-205ENST00000447267 SENP2Q9HC62 589 aa8.1□□□□□ -1.11
SDCBP-205ENST00000447267 STRN4Q9NRL3 753 aa8.1□□□□□ -1.11
SDCBP-205ENST00000447267 WDR4P57081 412 aaKnown RBP8.09□□□□□ -1.11
SDCBP-205ENST00000447267 ARID5BQ14865 1188 aa8.09□□□□□ -1.11
SDCBP-205ENST00000447267 OCSTAMPQ9BR26 566 aa8.09□□□□□ -1.11
SDCBP-205ENST00000447267 PRDM10Q9NQV6 1147 aa8.09□□□□□ -1.11
SDCBP-205ENST00000447267 PLCH1Q4KWH8 1693 aa8.08□□□□□ -1.12
SDCBP-205ENST00000447267 THSD7AQ9UPZ6 1657 aa8.08□□□□□ -1.12
SDCBP-205ENST00000447267 PCNTO95613 3336 aa8.08□□□□□ -1.12
SDCBP-205ENST00000447267 GOLGB1Q14789 3259 aaKnown RBP8.08□□□□□ -1.12
SDCBP-205ENST00000447267 PTPN23Q9H3S7 1636 aa8.08□□□□□ -1.12
SDCBP-205ENST00000447267 TERTO14746 1132 aaKnown RBP8.08□□□□□ -1.12
SDCBP-205ENST00000447267 WFS1O76024 890 aa8.08□□□□□ -1.12
SDCBP-205ENST00000447267 POLD1P28340 1107 aa8.08□□□□□ -1.12
SDCBP-205ENST00000447267 BPHLQ86WA6 291 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-205ENST00000447267 EPS8L1Q8TE68 723 aa8.08□□□□□ -1.12
SDCBP-205ENST00000447267 ZFP42Q96MM3 310 aa8.08□□□□□ -1.12
SDCBP-205ENST00000447267 HMX1Q9NP08 348 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-205ENST00000447267 LRPPRCP42704 1394 aaKnown RBP8.08□□□□□ -1.12
SDCBP-205ENST00000447267 DHX57Q6P158 1386 aaKnown RBP8.08□□□□□ -1.12
SDCBP-205ENST00000447267 FYCO1Q9BQS8 1478 aa8.07□□□□□ -1.12
SDCBP-205ENST00000447267 NALCNQ8IZF0 1738 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms