RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 HSPA1BP0DMV9 641 aaKnown RBP32.63■■■□□ 2.81
PMS1-214ENST00000446877 NBPF5PQ86XG9 351 aaPredicted RBP32.63■■■□□ 2.81
PMS1-214ENST00000446877 USP16Q9Y5T5 823 aa32.63■■■□□ 2.81
PMS1-214ENST00000446877 CHADLQ6NUI6 762 aa32.62■■■□□ 2.81
PMS1-214ENST00000446877 RTF1Q92541 710 aaKnown RBP32.62■■■□□ 2.81
PMS1-214ENST00000446877 NUDCQ9Y266 331 aa32.62■■■□□ 2.81
PMS1-214ENST00000446877 ZNF652Q9Y2D9 606 aa32.62■■■□□ 2.81
PMS1-214ENST00000446877 TIAM2Q8IVF5 1701 aa32.61■■■□□ 2.81
PMS1-214ENST00000446877 CLEC4GQ6UXB4 293 aa32.61■■■□□ 2.81
PMS1-214ENST00000446877 DDNO94850 711 aaPredicted RBP32.6■■■□□ 2.81
PMS1-214ENST00000446877 RSPH6AQ9H0K4 717 aa32.6■■■□□ 2.81
PMS1-214ENST00000446877 SNRPA1P09661 255 aaKnown RBP32.59■■■□□ 2.81
PMS1-214ENST00000446877 PIP4K2AP48426 406 aaPredicted RBP32.59■■■□□ 2.81
PMS1-214ENST00000446877 SCN7AQ01118 1682 aa32.59■■■□□ 2.81
PMS1-214ENST00000446877 ANKRD31Q8N7Z5 1873 aa32.57■■■□□ 2.8
PMS1-214ENST00000446877 IQCA1LA6NCM1 817 aa32.56■■■□□ 2.8
PMS1-214ENST00000446877 CREBZFQ9NS37 354 aa32.56■■■□□ 2.8
PMS1-214ENST00000446877 CCDC88AQ3V6T2 1871 aa32.56■■■□□ 2.8
PMS1-214ENST00000446877 U2AF1L5P0DN76 240 aaPredicted RBP32.55■■■□□ 2.8
PMS1-214ENST00000446877 NPR1P16066 1061 aa32.55■■■□□ 2.8
PMS1-214ENST00000446877 U2AF1Q01081 240 aaKnown RBP eCLIP32.55■■■□□ 2.8
PMS1-214ENST00000446877 CCDC93Q567U6 631 aa32.55■■■□□ 2.8
PMS1-214ENST00000446877 TPTE2Q6XPS3 522 aa32.55■■■□□ 2.8
PMS1-214ENST00000446877 PRAMEF22A3QJZ6 481 aa32.54■■■□□ 2.8
PMS1-214ENST00000446877 MCM10Q7L590 875 aa32.54■■■□□ 2.8
PMS1-214ENST00000446877 POTEIP0CG38 1075 aa32.52■■■□□ 2.8
PMS1-214ENST00000446877 POTEJP0CG39 1038 aa32.52■■■□□ 2.8
PMS1-214ENST00000446877 C7orf43Q8WVR3 580 aa32.52■■■□□ 2.8
PMS1-214ENST00000446877 MKRN1Q9UHC7 482 aaKnown RBP32.52■■■□□ 2.8
PMS1-214ENST00000446877 NIP7Q9Y221 180 aaKnown RBP eCLIP32.52■■■□□ 2.8
PMS1-214ENST00000446877 COL11A2P13942 1736 aaPredicted RBP32.51■■■□□ 2.8
PMS1-214ENST00000446877 SIPA1L3O60292 1781 aaPredicted RBP32.51■■■□□ 2.79
PMS1-214ENST00000446877 FER1L6Q2WGJ9 1857 aa32.5■■■□□ 2.79
PMS1-214ENST00000446877 RGL2O15211 777 aa32.49■■■□□ 2.79
PMS1-214ENST00000446877 LDHDQ86WU2 507 aa32.49■■■□□ 2.79
PMS1-214ENST00000446877 KLRG2A4D1S0 409 aaPredicted RBP32.48■■■□□ 2.79
PMS1-214ENST00000446877 FAM177BA6PVY3 158 aa32.48■■■□□ 2.79
PMS1-214ENST00000446877 GTF2E1P29083 439 aaPredicted RBP32.48■■■□□ 2.79
PMS1-214ENST00000446877 FKBP4Q02790 459 aaKnown RBP eCLIP32.48■■■□□ 2.79
PMS1-214ENST00000446877 L3MBTL3Q96JM7 780 aaPredicted RBP32.48■■■□□ 2.79
PMS1-214ENST00000446877 SLX4Q8IY92 1834 aa32.48■■■□□ 2.79
PMS1-214ENST00000446877 HTATSF1O43719 755 aaKnown RBP32.47■■■□□ 2.79
PMS1-214ENST00000446877 RTKN2Q8IZC4 609 aa32.47■■■□□ 2.79
PMS1-214ENST00000446877 TAF1DQ9H5J8 278 aaPredicted RBP32.47■■■□□ 2.79
PMS1-214ENST00000446877 NBPF26B4DH59 902 aa32.46■■■□□ 2.79
PMS1-214ENST00000446877 DCTN1Q14203 1278 aa32.46■■■□□ 2.79
PMS1-214ENST00000446877 NBPF10Q6P3W6 841 aaKnown RBP32.46■■■□□ 2.79
PMS1-214ENST00000446877 NBPF15Q8N660 670 aa32.46■■■□□ 2.79
PMS1-214ENST00000446877 ZNF277Q9NRM2 450 aaPredicted RBP32.46■■■□□ 2.79
PMS1-214ENST00000446877 DICER1Q9UPY3 1922 aaKnown RBP32.45■■■□□ 2.79
PMS1-214ENST00000446877 ALDH1B1P30837 517 aa32.45■■■□□ 2.79
PMS1-214ENST00000446877 TAF7Q15545 349 aaPredicted RBP32.45■■■□□ 2.79
PMS1-214ENST00000446877 PPP2R1AP30153 589 aa32.43■■■□□ 2.78
PMS1-214ENST00000446877 EAPPQ56P03 285 aaPredicted RBP32.43■■■□□ 2.78
PMS1-214ENST00000446877 HACL1Q9UJ83 578 aa32.42■■■□□ 2.78
PMS1-214ENST00000446877 CLEC11AQ9Y240 323 aa32.42■■■□□ 2.78
PMS1-214ENST00000446877 HLFQ16534 295 aa32.4■■■□□ 2.78
PMS1-214ENST00000446877 OLFM4Q6UX06 510 aa32.4■■■□□ 2.78
PMS1-214ENST00000446877 PASKQ96RG2 1323 aa32.4■■■□□ 2.78
PMS1-214ENST00000446877 BCORQ6W2J9 1755 aa32.4■■■□□ 2.78
PMS1-214ENST00000446877 NEFMP07197 916 aa32.39■■■□□ 2.78
PMS1-214ENST00000446877 ZNF541Q9H0D2 1346 aa32.39■■■□□ 2.78
PMS1-214ENST00000446877 CNTNAP1P78357 1384 aa32.39■■■□□ 2.78
PMS1-214ENST00000446877 TMEM88BA6NKF7 163 aa32.38■■■□□ 2.77
PMS1-214ENST00000446877 SYNE4Q8N205 404 aa32.38■■■□□ 2.77
PMS1-214ENST00000446877 NYXQ9GZU5 481 aa32.38■■■□□ 2.77
PMS1-214ENST00000446877 MIS18AQ9NYP9 233 aa32.38■■■□□ 2.77
PMS1-214ENST00000446877 EPHX2P34913 555 aa32.37■■■□□ 2.77
PMS1-214ENST00000446877 IARSP41252 1262 aaKnown RBP32.37■■■□□ 2.77
PMS1-214ENST00000446877 PNMA8AQ86V59 439 aaPredicted RBP32.37■■■□□ 2.77
PMS1-214ENST00000446877 NGEFQ8N5V2 710 aa32.37■■■□□ 2.77
PMS1-214ENST00000446877 ITGBL1O95965 494 aaPredicted RBP32.35■■■□□ 2.77
PMS1-214ENST00000446877 PNISRQ8TF01 805 aaKnown RBP32.35■■■□□ 2.77
PMS1-214ENST00000446877 JDP2Q8WYK2 163 aa32.35■■■□□ 2.77
PMS1-214ENST00000446877 AIDAQ96BJ3 306 aa32.35■■■□□ 2.77
PMS1-214ENST00000446877 ARFGEF2Q9Y6D5 1785 aa32.33■■■□□ 2.77
PMS1-214ENST00000446877 ERVV-1B6SEH8 477 aa32.33■■■□□ 2.77
PMS1-214ENST00000446877 FZD9O00144 591 aa32.33■■■□□ 2.77
PMS1-214ENST00000446877 CACNA1SQ13698 1873 aa32.32■■■□□ 2.76
PMS1-214ENST00000446877 FOXN1O15353 648 aa32.32■■■□□ 2.76
PMS1-214ENST00000446877 CC2D2BQ6DHV5 1058 aa32.32■■■□□ 2.76
PMS1-214ENST00000446877 GPC2Q8N158 579 aa32.32■■■□□ 2.76
PMS1-214ENST00000446877 VEGFBP49765 207 aa32.31■■■□□ 2.76
PMS1-214ENST00000446877 KIF6Q6ZMV9 814 aa32.31■■■□□ 2.76
PMS1-214ENST00000446877 NUTM1Q86Y26 1132 aa32.31■■■□□ 2.76
PMS1-214ENST00000446877 RPGRQ92834 1020 aaKnown RBP32.31■■■□□ 2.76
PMS1-214ENST00000446877 PSMD1Q99460 953 aa32.31■■■□□ 2.76
PMS1-214ENST00000446877 RRP7AQ9Y3A4 280 aaKnown RBP32.31■■■□□ 2.76
PMS1-214ENST00000446877 RNF123Q5XPI4 1314 aa32.3■■■□□ 2.76
PMS1-214ENST00000446877 CRY2Q49AN0 593 aa32.3■■■□□ 2.76
PMS1-214ENST00000446877 CNTROBQ8N137 903 aa32.3■■■□□ 2.76
PMS1-214ENST00000446877 SCN4AP35499 1836 aa32.3■■■□□ 2.76
PMS1-214ENST00000446877 PRDM10Q9NQV6 1147 aa32.29■■■□□ 2.76
PMS1-214ENST00000446877 MAP3K15Q6ZN16 1313 aa32.28■■■□□ 2.76
PMS1-214ENST00000446877 CTCFP49711 727 aaPredicted RBP32.28■■■□□ 2.76
PMS1-214ENST00000446877 EIF6P56537 245 aaKnown RBP32.28■■■□□ 2.76
PMS1-214ENST00000446877 MAP1SQ66K74 1059 aaPredicted RBP32.28■■■□□ 2.76
PMS1-214ENST00000446877 GJA3Q9Y6H8 435 aa32.27■■■□□ 2.76
PMS1-214ENST00000446877 GRIPAP1Q4V328 841 aa32.26■■■□□ 2.75
PMS1-214ENST00000446877 ABCC12Q96J65 1359 aa32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms