RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 DISP2A7MBM2 1401 aa21.47■■□□□ 1.03
SMC6-206ENST00000446852 GCKRQ14397 625 aa21.47■■□□□ 1.03
SMC6-206ENST00000446852 RTL5Q5HYW3 569 aaPredicted RBP21.47■■□□□ 1.03
SMC6-206ENST00000446852 BICC1Q9H694 974 aaKnown RBP21.47■■□□□ 1.03
SMC6-206ENST00000446852 HDAC5Q9UQL6 1122 aa21.47■■□□□ 1.03
SMC6-206ENST00000446852 CASC1Q6TDU7 716 aa21.46■■□□□ 1.03
SMC6-206ENST00000446852 PHLPP1O60346 1717 aa21.46■■□□□ 1.03
SMC6-206ENST00000446852 NFKBIBQ15653 356 aa21.46■■□□□ 1.03
SMC6-206ENST00000446852 AOX1Q06278 1338 aa21.45■■□□□ 1.03
SMC6-206ENST00000446852 EIF5BO60841 1220 aaKnown RBP21.45■■□□□ 1.02
SMC6-206ENST00000446852 PTCD1O75127 700 aaKnown RBP21.45■■□□□ 1.02
SMC6-206ENST00000446852 USP26Q9BXU7 913 aa21.45■■□□□ 1.02
SMC6-206ENST00000446852 PA2G4Q9UQ80 394 aaKnown RBP21.45■■□□□ 1.02
SMC6-206ENST00000446852 HSP90AB4PQ58FF6 505 aa21.45■■□□□ 1.02
SMC6-206ENST00000446852 ERBB4Q15303 1308 aa21.44■■□□□ 1.02
SMC6-206ENST00000446852 HSCBQ8IWL3 235 aa21.44■■□□□ 1.02
SMC6-206ENST00000446852 SNX21Q969T3 373 aa21.44■■□□□ 1.02
SMC6-206ENST00000446852 UNC5CLQ8IV45 518 aa21.43■■□□□ 1.02
SMC6-206ENST00000446852 SPRYD3Q8NCJ5 442 aa21.43■■□□□ 1.02
SMC6-206ENST00000446852 RBM42Q9BTD8 480 aaKnown RBP21.43■■□□□ 1.02
SMC6-206ENST00000446852 OS9Q13438 667 aaPredicted RBP21.42■■□□□ 1.02
SMC6-206ENST00000446852 PLBD2Q8NHP8 589 aa21.42■■□□□ 1.02
SMC6-206ENST00000446852 PI4K2BQ8TCG2 481 aa21.42■■□□□ 1.02
SMC6-206ENST00000446852 TMOD3Q9NYL9 352 aa21.42■■□□□ 1.02
SMC6-206ENST00000446852 A1BGP04217 495 aa21.41■■□□□ 1.02
SMC6-206ENST00000446852 KAT6BQ8WYB5 2073 aa21.41■■□□□ 1.02
SMC6-206ENST00000446852 TRIM6-TRIM34B2RNG4 842 aa21.41■■□□□ 1.02
SMC6-206ENST00000446852 ERC2O15083 957 aa21.41■■□□□ 1.02
SMC6-206ENST00000446852 CD2BP2O95400 341 aaKnown RBP21.41■■□□□ 1.02
SMC6-206ENST00000446852 EPHA10Q5JZY3 1008 aa21.41■■□□□ 1.02
SMC6-206ENST00000446852 TJP1Q07157 1748 aa21.41■■□□□ 1.02
SMC6-206ENST00000446852 NRAPQ86VF7 1730 aa21.41■■□□□ 1.02
SMC6-206ENST00000446852 RILPL2Q969X0 211 aa21.4■■□□□ 1.02
SMC6-206ENST00000446852 ATP5J2-PTCD1G3V325 749 aa21.4■■□□□ 1.02
SMC6-206ENST00000446852 TTLL7Q6ZT98 887 aa21.39■■□□□ 1.02
SMC6-206ENST00000446852 JARID2Q92833 1246 aaPredicted RBP21.39■■□□□ 1.02
SMC6-206ENST00000446852 REC8O95072 547 aa21.39■■□□□ 1.01
SMC6-206ENST00000446852 PIGBQ92521 554 aa21.39■■□□□ 1.01
SMC6-206ENST00000446852 CHMLP26374 656 aa21.38■■□□□ 1.01
SMC6-206ENST00000446852 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.38■■□□□ 1.01
SMC6-206ENST00000446852 LRP6O75581 1613 aa21.38■■□□□ 1.01
SMC6-206ENST00000446852 USP42Q9H9J4 1324 aaKnown RBP21.38■■□□□ 1.01
SMC6-206ENST00000446852 ESYT1Q9BSJ8 1104 aa21.38■■□□□ 1.01
SMC6-206ENST00000446852 ASAP1Q9ULH1 1129 aa21.38■■□□□ 1.01
SMC6-206ENST00000446852 UBE3BQ7Z3V4 1068 aa21.37■■□□□ 1.01
SMC6-206ENST00000446852 ERC1Q8IUD2 1116 aa21.37■■□□□ 1.01
SMC6-206ENST00000446852 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.37■■□□□ 1.01
SMC6-206ENST00000446852 FRAT2O75474 233 aaPredicted RBP21.37■■□□□ 1.01
SMC6-206ENST00000446852 SASH1O94885 1247 aa21.36■■□□□ 1.01
SMC6-206ENST00000446852 MAP4K4O95819 1239 aaPredicted RBP21.36■■□□□ 1.01
SMC6-206ENST00000446852 CLASRPQ8N2M8 674 aaKnown RBP21.36■■□□□ 1.01
SMC6-206ENST00000446852 KLHDC4Q8TBB5 520 aa21.36■■□□□ 1.01
SMC6-206ENST00000446852 COL15A1P39059 1388 aa21.36■■□□□ 1.01
SMC6-206ENST00000446852 A0A087WZG4 1122 aa21.35■■□□□ 1.01
SMC6-206ENST00000446852 CASP7P55210 303 aa21.35■■□□□ 1.01
SMC6-206ENST00000446852 DOT1LQ8TEK3 1739 aa21.35■■□□□ 1.01
SMC6-206ENST00000446852 ADAMTS2O95450 1211 aa21.35■■□□□ 1.01
SMC6-206ENST00000446852 ATG3Q9NT62 314 aa21.35■■□□□ 1.01
SMC6-206ENST00000446852 TTC41PQ6P2S7 1318 aa21.35■■□□□ 1.01
SMC6-206ENST00000446852 SIL1Q9H173 461 aa21.34■■□□□ 1.01
SMC6-206ENST00000446852 BCL9O00512 1426 aa21.34■■□□□ 1.01
SMC6-206ENST00000446852 RABEP1Q15276 862 aa21.34■■□□□ 1.01
SMC6-206ENST00000446852 G3BP1Q13283 466 aaKnown RBP eCLIP21.33■■□□□ 1.01
SMC6-206ENST00000446852 RABL6Q3YEC7 729 aaPredicted RBP21.33■■□□□ 1.01
SMC6-206ENST00000446852 ZBTB3Q9H5J0 574 aa21.33■■□□□ 1.01
SMC6-206ENST00000446852 IL25Q9H293 177 aa21.33■■□□□ 1
SMC6-206ENST00000446852 DNAJC10Q8IXB1 793 aa21.32■■□□□ 1
SMC6-206ENST00000446852 EXOC5O00471 708 aa21.32■■□□□ 1
SMC6-206ENST00000446852 RFX5P48382 616 aaPredicted RBP21.32■■□□□ 1
SMC6-206ENST00000446852 AACSQ86V21 672 aa21.32■■□□□ 1
SMC6-206ENST00000446852 K7ELQ4 463 aaPredicted RBP21.31■■□□□ 1
SMC6-206ENST00000446852 IFIT2P09913 472 aaKnown RBP21.31■■□□□ 1
SMC6-206ENST00000446852 VSIG10Q8N0Z9 540 aa21.31■■□□□ 1
SMC6-206ENST00000446852 EAF2Q96CJ1 260 aaPredicted RBP21.31■■□□□ 1
SMC6-206ENST00000446852 GLRX3O76003 335 aaKnown RBP21.31■■□□□ 1
SMC6-206ENST00000446852 DDIT3P35638 169 aa21.31■■□□□ 1
SMC6-206ENST00000446852 ECHDC1Q9NTX5 307 aa21.31■■□□□ 1
SMC6-206ENST00000446852 H7C1W4 665 aa21.3■■□□□ 1
SMC6-206ENST00000446852 COPRSQ9NQ92 184 aa21.3■■□□□ 1
SMC6-206ENST00000446852 CWC25Q9NXE8 425 aaPredicted RBP21.3■■□□□ 1
SMC6-206ENST00000446852 NWD2Q9ULI1 1742 aa21.29■■□□□ 1
SMC6-206ENST00000446852 PTPN12Q05209 780 aaKnown RBP21.29■■□□□ 1
SMC6-206ENST00000446852 CNTROBQ8N137 903 aa21.29■■□□□ 1
SMC6-206ENST00000446852 SPATA31A1Q5TZJ5 1347 aa21.29■■□□□ 1
SMC6-206ENST00000446852 ANO2Q9NQ90 1003 aa21.29■■□□□ 1
SMC6-206ENST00000446852 TLR7Q9NYK1 1049 aaKnown RBP21.29■■□□□ 1
SMC6-206ENST00000446852 CHMP5Q9NZZ3 219 aa21.29■■□□□ 1
SMC6-206ENST00000446852 PIP4K2BP78356 416 aa21.28■■□□□ 1
SMC6-206ENST00000446852 SLC4A9Q96Q91 983 aa21.28■■□□□ 1
SMC6-206ENST00000446852 TEX13AQ9BXU3 409 aaPredicted RBP21.28■■□□□ 1
SMC6-206ENST00000446852 FOXO4P98177 505 aa21.28■■□□□ 1
SMC6-206ENST00000446852 GPATCH3Q96I76 525 aa21.28■■□□□ 1
SMC6-206ENST00000446852 CCDC8Q9H0W5 538 aaPredicted RBP21.28■■□□□ 1
SMC6-206ENST00000446852 ZNF330Q9Y3S2 320 aaPredicted RBP21.27■■□□□ 1
SMC6-206ENST00000446852 NUTM2BA6NNL0 878 aaPredicted RBP21.27■□□□□ 0.99
SMC6-206ENST00000446852 NUTM2EB1AL46 878 aaPredicted RBP21.27■□□□□ 0.99
SMC6-206ENST00000446852 LMBR1LQ6UX01 489 aa21.27■□□□□ 0.99
SMC6-206ENST00000446852 NUTM2AQ8IVF1 878 aaPredicted RBP21.27■□□□□ 0.99
SMC6-206ENST00000446852 CCDC191Q8NCU4 936 aa21.27■□□□□ 0.99
SMC6-206ENST00000446852 DEKP35659 375 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms