RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 COL15A1P39059 1388 aa19.28■□□□□ 0.68
SNX13-204ENST00000444712 IGKV5-2P06315 115 aa19.28■□□□□ 0.68
SNX13-204ENST00000444712 MYD88Q99836 296 aa19.28■□□□□ 0.68
SNX13-204ENST00000444712 GCKRQ14397 625 aa19.27■□□□□ 0.68
SNX13-204ENST00000444712 VSIG10Q8N0Z9 540 aa19.27■□□□□ 0.68
SNX13-204ENST00000444712 THRAP3Q9Y2W1 955 aaKnown RBP19.27■□□□□ 0.68
SNX13-204ENST00000444712 SLC4A3P48751 1232 aa19.27■□□□□ 0.67
SNX13-204ENST00000444712 EXOC5O00471 708 aa19.25■□□□□ 0.67
SNX13-204ENST00000444712 OS9Q13438 667 aaPredicted RBP19.25■□□□□ 0.67
SNX13-204ENST00000444712 REC8O95072 547 aa19.25■□□□□ 0.67
SNX13-204ENST00000444712 SUCLG2Q96I99 432 aa19.25■□□□□ 0.67
SNX13-204ENST00000444712 HSCBQ8IWL3 235 aa19.24■□□□□ 0.67
SNX13-204ENST00000444712 TBC1D2Q9BYX2 928 aa19.24■□□□□ 0.67
SNX13-204ENST00000444712 DOT1LQ8TEK3 1739 aa19.23■□□□□ 0.67
SNX13-204ENST00000444712 PTCD1O75127 700 aaKnown RBP19.23■□□□□ 0.67
SNX13-204ENST00000444712 BICC1Q9H694 974 aaKnown RBP19.23■□□□□ 0.67
SNX13-204ENST00000444712 IL1RAPL2Q9NP60 686 aa19.23■□□□□ 0.67
SNX13-204ENST00000444712 TTC41PQ6P2S7 1318 aa19.22■□□□□ 0.67
SNX13-204ENST00000444712 NBPF26B4DH59 902 aa19.22■□□□□ 0.67
SNX13-204ENST00000444712 NBPF14Q5TI25 921 aa19.22■□□□□ 0.67
SNX13-204ENST00000444712 NBPF10Q6P3W6 841 aaKnown RBP19.22■□□□□ 0.67
SNX13-204ENST00000444712 CLASRPQ8N2M8 674 aaKnown RBP19.22■□□□□ 0.67
SNX13-204ENST00000444712 NBPF15Q8N660 670 aa19.22■□□□□ 0.67
SNX13-204ENST00000444712 SNX21Q969T3 373 aa19.22■□□□□ 0.67
SNX13-204ENST00000444712 USP42Q9H9J4 1324 aaKnown RBP19.22■□□□□ 0.67
SNX13-204ENST00000444712 ERC2O15083 957 aa19.22■□□□□ 0.67
SNX13-204ENST00000444712 BCL9O00512 1426 aa19.22■□□□□ 0.67
SNX13-204ENST00000444712 RTL5Q5HYW3 569 aaPredicted RBP19.21■□□□□ 0.67
SNX13-204ENST00000444712 GPATCH3Q96I76 525 aa19.21■□□□□ 0.67
SNX13-204ENST00000444712 KAZALD1Q96I82 304 aa19.21■□□□□ 0.67
SNX13-204ENST00000444712 PIP4K2AP48426 406 aaPredicted RBP19.2■□□□□ 0.66
SNX13-204ENST00000444712 G3BP1Q13283 466 aaKnown RBP eCLIP19.2■□□□□ 0.66
SNX13-204ENST00000444712 PIGBQ92521 554 aa19.2■□□□□ 0.66
SNX13-204ENST00000444712 TJP1Q07157 1748 aa19.2■□□□□ 0.66
SNX13-204ENST00000444712 SPATA31A1Q5TZJ5 1347 aa19.2■□□□□ 0.66
SNX13-204ENST00000444712 STARD3NLO95772 234 aa19.2■□□□□ 0.66
SNX13-204ENST00000444712 TRIM6-TRIM34B2RNG4 842 aa19.19■□□□□ 0.66
SNX13-204ENST00000444712 ADAMTS2O95450 1211 aa19.18■□□□□ 0.66
SNX13-204ENST00000444712 A1BGP04217 495 aa19.18■□□□□ 0.66
SNX13-204ENST00000444712 USP26Q9BXU7 913 aa19.18■□□□□ 0.66
SNX13-204ENST00000444712 SLIT2O94813 1529 aa19.18■□□□□ 0.66
SNX13-204ENST00000444712 A0A087WZG4 1122 aa19.18■□□□□ 0.66
SNX13-204ENST00000444712 NBR1Q14596 966 aa19.18■□□□□ 0.66
SNX13-204ENST00000444712 NUTM1Q86Y26 1132 aa19.18■□□□□ 0.66
SNX13-204ENST00000444712 ATG3Q9NT62 314 aa19.18■□□□□ 0.66
SNX13-204ENST00000444712 GLRX3O76003 335 aaKnown RBP19.17■□□□□ 0.66
SNX13-204ENST00000444712 RABL6Q3YEC7 729 aaPredicted RBP19.17■□□□□ 0.66
SNX13-204ENST00000444712 CCDC191Q8NCU4 936 aa19.17■□□□□ 0.66
SNX13-204ENST00000444712 RILPL2Q969X0 211 aa19.17■□□□□ 0.66
SNX13-204ENST00000444712 CWC25Q9NXE8 425 aaPredicted RBP19.17■□□□□ 0.66
SNX13-204ENST00000444712 EPB41L2O43491 1005 aaKnown RBP19.17■□□□□ 0.66
SNX13-204ENST00000444712 CNTROBQ8N137 903 aa19.17■□□□□ 0.66
SNX13-204ENST00000444712 ASAP1Q9ULH1 1129 aa19.17■□□□□ 0.66
SNX13-204ENST00000444712 KAT6BQ8WYB5 2073 aa19.16■□□□□ 0.66
SNX13-204ENST00000444712 IFIT2P09913 472 aaKnown RBP19.16■□□□□ 0.66
SNX13-204ENST00000444712 RABEP1Q15276 862 aa19.16■□□□□ 0.66
SNX13-204ENST00000444712 DDB1Q16531 1140 aa19.16■□□□□ 0.66
SNX13-204ENST00000444712 UBE3BQ7Z3V4 1068 aa19.16■□□□□ 0.66
SNX13-204ENST00000444712 PI4K2BQ8TCG2 481 aa19.16■□□□□ 0.66
SNX13-204ENST00000444712 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.16■□□□□ 0.66
SNX13-204ENST00000444712 ANKRD36CQ5JPF3 1778 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 PIP4K2BP78356 416 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 TSHZ3Q63HK5 1081 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 TTLL7Q6ZT98 887 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 KIF2CQ99661 725 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 COPRSQ9NQ92 184 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 PA2G4Q9UQ80 394 aaKnown RBP19.15■□□□□ 0.66
SNX13-204ENST00000444712 SPATA31A5Q5VU36 1347 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 SPATA31A7Q8IWB4 1347 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 ATP5J2-PTCD1G3V325 749 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 H7C1W4 665 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 KIF6Q6ZMV9 814 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 BARGINQ6ZT62 677 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 ESYT1Q9BSJ8 1104 aa19.15■□□□□ 0.66
SNX13-204ENST00000444712 CICQ96RK0 1608 aaPredicted RBP19.14■□□□□ 0.66
SNX13-204ENST00000444712 CHMLP26374 656 aa19.14■□□□□ 0.65
SNX13-204ENST00000444712 CASP7P55210 303 aa19.14■□□□□ 0.65
SNX13-204ENST00000444712 RBM42Q9BTD8 480 aaKnown RBP19.14■□□□□ 0.65
SNX13-204ENST00000444712 ECHDC1Q9NTX5 307 aa19.14■□□□□ 0.65
SNX13-204ENST00000444712 DNAJC10Q8IXB1 793 aa19.13■□□□□ 0.65
SNX13-204ENST00000444712 NUTM2BA6NNL0 878 aaPredicted RBP19.13■□□□□ 0.65
SNX13-204ENST00000444712 NUTM2EB1AL46 878 aaPredicted RBP19.13■□□□□ 0.65
SNX13-204ENST00000444712 MCCP23508 829 aa19.13■□□□□ 0.65
SNX13-204ENST00000444712 NUTM2AQ8IVF1 878 aaPredicted RBP19.13■□□□□ 0.65
SNX13-204ENST00000444712 IL27Q8NEV9 243 aa19.12■□□□□ 0.65
SNX13-204ENST00000444712 ZBTB3Q9H5J0 574 aa19.12■□□□□ 0.65
SNX13-204ENST00000444712 EPHA10Q5JZY3 1008 aa19.12■□□□□ 0.65
SNX13-204ENST00000444712 AACSQ86V21 672 aa19.12■□□□□ 0.65
SNX13-204ENST00000444712 UBAP1LF5GYI3 381 aa19.11■□□□□ 0.65
SNX13-204ENST00000444712 SASH1O94885 1247 aa19.11■□□□□ 0.65
SNX13-204ENST00000444712 TRIM28Q13263 835 aaKnown RBP19.11■□□□□ 0.65
SNX13-204ENST00000444712 JCADQ9P266 1359 aa19.11■□□□□ 0.65
SNX13-204ENST00000444712 TCIRG1Q13488 830 aa19.1■□□□□ 0.65
SNX13-204ENST00000444712 HSP90AB3PQ58FF7 597 aa19.1■□□□□ 0.65
SNX13-204ENST00000444712 SYTL4Q96C24 671 aaPredicted RBP19.1■□□□□ 0.65
SNX13-204ENST00000444712 ISCA1Q9BUE6 129 aa19.1■□□□□ 0.65
SNX13-204ENST00000444712 SLKQ9H2G2 1235 aaPredicted RBP19.1■□□□□ 0.65
SNX13-204ENST00000444712 ANTXR1Q9H6X2 564 aa19.1■□□□□ 0.65
SNX13-204ENST00000444712 RFX5P48382 616 aaPredicted RBP19.1■□□□□ 0.65
SNX13-204ENST00000444712 MAP3K15Q6ZN16 1313 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms