RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
SSBP3-208ENST00000444533 PTGER2P43116 358 aa18.07■□□□□ 0.48
SSBP3-208ENST00000444533 PDIA6Q15084 440 aa18.07■□□□□ 0.48
SSBP3-208ENST00000444533 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
SSBP3-208ENST00000444533 XAGE3Q8WTP9 111 aa18.07■□□□□ 0.48
SSBP3-208ENST00000444533 ZNF428Q96B54 188 aa18.07■□□□□ 0.48
SSBP3-208ENST00000444533 LRP5O75197 1615 aa18.07■□□□□ 0.48
SSBP3-208ENST00000444533 VAMP4O75379 141 aa18.06■□□□□ 0.48
SSBP3-208ENST00000444533 PROSER3Q2NL68 480 aa18.06■□□□□ 0.48
SSBP3-208ENST00000444533 HSP90AB3PQ58FF7 597 aa18.06■□□□□ 0.48
SSBP3-208ENST00000444533 BICDL1Q6ZP65 573 aa18.06■□□□□ 0.48
SSBP3-208ENST00000444533 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
SSBP3-208ENST00000444533 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
SSBP3-208ENST00000444533 TTLL7Q6ZT98 887 aa18.05■□□□□ 0.48
SSBP3-208ENST00000444533 ANKRD13DQ6ZTN6 518 aa18.04■□□□□ 0.48
SSBP3-208ENST00000444533 RIC3Q7Z5B4 369 aa18.04■□□□□ 0.48
SSBP3-208ENST00000444533 PLBD2Q8NHP8 589 aa18.04■□□□□ 0.48
SSBP3-208ENST00000444533 SGIP1Q9BQI5 828 aa18.04■□□□□ 0.48
SSBP3-208ENST00000444533 NIP7Q9Y221 180 aaKnown RBP eCLIP18.04■□□□□ 0.48
SSBP3-208ENST00000444533 CARMIL3Q8ND23 1372 aa18.04■□□□□ 0.48
SSBP3-208ENST00000444533 NFIXQ14938 502 aa18.03■□□□□ 0.48
SSBP3-208ENST00000444533 TBC1D9BQ66K14 1250 aa18.03■□□□□ 0.48
SSBP3-208ENST00000444533 GIGYF2Q6Y7W6 1299 aaKnown RBP18.03■□□□□ 0.48
SSBP3-208ENST00000444533 TRMT2AQ8IZ69 625 aaKnown RBP18.03■□□□□ 0.48
SSBP3-208ENST00000444533 SCN7AQ01118 1682 aa18.03■□□□□ 0.48
SSBP3-208ENST00000444533 TCERG1O14776 1098 aaKnown RBP18.02■□□□□ 0.48
SSBP3-208ENST00000444533 GTF2E1P29083 439 aaPredicted RBP18.02■□□□□ 0.48
SSBP3-208ENST00000444533 TM4SF1P30408 202 aa18.02■□□□□ 0.48
SSBP3-208ENST00000444533 BCL2L12Q9HB09 334 aa18.02■□□□□ 0.48
SSBP3-208ENST00000444533 SERPINB2P05120 415 aa18.01■□□□□ 0.47
SSBP3-208ENST00000444533 LRP10Q7Z4F1 713 aa18.01■□□□□ 0.47
SSBP3-208ENST00000444533 NBPF5PQ86XG9 351 aaPredicted RBP18.01■□□□□ 0.47
SSBP3-208ENST00000444533 NYXQ9GZU5 481 aa18.01■□□□□ 0.47
SSBP3-208ENST00000444533 DCAF8L1A6NGE4 600 aa18■□□□□ 0.47
SSBP3-208ENST00000444533 POLRMTO00411 1230 aaKnown RBP18■□□□□ 0.47
SSBP3-208ENST00000444533 ST5P78524 1137 aa18■□□□□ 0.47
SSBP3-208ENST00000444533 NEXNQ0ZGT2 675 aa18■□□□□ 0.47
SSBP3-208ENST00000444533 FKBP5Q13451 457 aaPredicted RBP18■□□□□ 0.47
SSBP3-208ENST00000444533 HLFQ16534 295 aa18■□□□□ 0.47
SSBP3-208ENST00000444533 PARP10Q53GL7 1025 aa18■□□□□ 0.47
SSBP3-208ENST00000444533 TPTE2Q6XPS3 522 aa18■□□□□ 0.47
SSBP3-208ENST00000444533 PPP1R42Q7Z4L9 355 aa18■□□□□ 0.47
SSBP3-208ENST00000444533 PHAXQ9H814 394 aaKnown RBP18■□□□□ 0.47
SSBP3-208ENST00000444533 CD2APQ9Y5K6 639 aa18■□□□□ 0.47
SSBP3-208ENST00000444533 BCORQ6W2J9 1755 aa17.99■□□□□ 0.47
SSBP3-208ENST00000444533 COL24A1Q17RW2 1714 aa17.99■□□□□ 0.47
SSBP3-208ENST00000444533 FLIIQ13045 1269 aa17.99■□□□□ 0.47
SSBP3-208ENST00000444533 ALDH1L2Q3SY69 923 aa17.99■□□□□ 0.47
SSBP3-208ENST00000444533 CNBD1Q8NA66 436 aa17.99■□□□□ 0.47
SSBP3-208ENST00000444533 YTHDC1Q96MU7 727 aaKnown RBP17.99■□□□□ 0.47
SSBP3-208ENST00000444533 FHDC1Q9C0D6 1143 aaPredicted RBP17.99■□□□□ 0.47
SSBP3-208ENST00000444533 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
SSBP3-208ENST00000444533 GPTP24298 496 aa17.98■□□□□ 0.47
SSBP3-208ENST00000444533 DDR1Q08345 913 aa17.98■□□□□ 0.47
SSBP3-208ENST00000444533 TCIRG1Q13488 830 aa17.98■□□□□ 0.47
SSBP3-208ENST00000444533 SMC4Q9NTJ3 1288 aa17.98■□□□□ 0.47
SSBP3-208ENST00000444533 KSR2Q6VAB6 950 aa17.97■□□□□ 0.47
SSBP3-208ENST00000444533 CACNA1FO60840 1977 aa17.97■□□□□ 0.47
SSBP3-208ENST00000444533 FAM177BA6PVY3 158 aa17.96■□□□□ 0.47
SSBP3-208ENST00000444533 SYT17Q9BSW7 474 aa17.96■□□□□ 0.47
SSBP3-208ENST00000444533 MAP3K2Q9Y2U5 619 aa17.96■□□□□ 0.47
SSBP3-208ENST00000444533 PI4KAP2A4QPH2 592 aa17.95■□□□□ 0.46
SSBP3-208ENST00000444533 TGFB2P61812 414 aa17.95■□□□□ 0.46
SSBP3-208ENST00000444533 ZNF34Q8IZ26 560 aa17.95■□□□□ 0.46
SSBP3-208ENST00000444533 PI4KAP1Q8N8J0 262 aa17.95■□□□□ 0.46
SSBP3-208ENST00000444533 UTP14AQ9BVJ6 771 aaKnown RBP17.95■□□□□ 0.46
SSBP3-208ENST00000444533 PDZRN3Q9UPQ7 1066 aa17.95■□□□□ 0.46
SSBP3-208ENST00000444533 HSP90B1P14625 803 aaKnown RBP17.94■□□□□ 0.46
SSBP3-208ENST00000444533 PDE6BP35913 854 aa17.94■□□□□ 0.46
SSBP3-208ENST00000444533 MYD88Q99836 296 aa17.94■□□□□ 0.46
SSBP3-208ENST00000444533 METTL22Q9BUU2 404 aaPredicted RBP17.94■□□□□ 0.46
SSBP3-208ENST00000444533 PTPRCP08575 1304 aa17.94■□□□□ 0.46
SSBP3-208ENST00000444533 RNF123Q5XPI4 1314 aa17.94■□□□□ 0.46
SSBP3-208ENST00000444533 NUP98P52948 1817 aa17.93■□□□□ 0.46
SSBP3-208ENST00000444533 G2E3Q7L622 706 aa17.93■□□□□ 0.46
SSBP3-208ENST00000444533 SSH1Q8WYL5 1049 aa17.93■□□□□ 0.46
SSBP3-208ENST00000444533 BCL2L13Q9BXK5 485 aa17.93■□□□□ 0.46
SSBP3-208ENST00000444533 IBTKQ9P2D0 1353 aaPredicted RBP17.92■□□□□ 0.46
SSBP3-208ENST00000444533 PRR5LQ6MZQ0 368 aa17.92■□□□□ 0.46
SSBP3-208ENST00000444533 MRPL50Q8N5N7 158 aaKnown RBP17.92■□□□□ 0.46
SSBP3-208ENST00000444533 DNAAF4Q8WXU2 420 aa17.92■□□□□ 0.46
SSBP3-208ENST00000444533 BRIP1Q9BX63 1249 aa17.92■□□□□ 0.46
SSBP3-208ENST00000444533 TRMT112Q9UI30 125 aaKnown RBP17.92■□□□□ 0.46
SSBP3-208ENST00000444533 KIF16BQ96L93 1317 aa17.92■□□□□ 0.46
SSBP3-208ENST00000444533 C10orf71Q711Q0 1435 aa17.91■□□□□ 0.46
SSBP3-208ENST00000444533 ATP5J2-PTCD1G3V325 749 aa17.91■□□□□ 0.46
SSBP3-208ENST00000444533 H0YIN7 160 aa17.91■□□□□ 0.46
SSBP3-208ENST00000444533 IPO8O15397 1037 aaKnown RBP17.91■□□□□ 0.46
SSBP3-208ENST00000444533 RARSP54136 660 aaKnown RBP17.91■□□□□ 0.46
SSBP3-208ENST00000444533 TRIM28Q13263 835 aaKnown RBP17.91■□□□□ 0.46
SSBP3-208ENST00000444533 SUSD4Q5VX71 490 aa17.91■□□□□ 0.46
SSBP3-208ENST00000444533 NLRP10Q86W26 655 aa17.91■□□□□ 0.46
SSBP3-208ENST00000444533 CCDC191Q8NCU4 936 aa17.91■□□□□ 0.46
SSBP3-208ENST00000444533 CWC25Q9NXE8 425 aaPredicted RBP17.91■□□□□ 0.46
SSBP3-208ENST00000444533 SRCAPQ6ZRS2 3230 aa17.91■□□□□ 0.46
SSBP3-208ENST00000444533 UBN2Q6ZU65 1347 aa17.9■□□□□ 0.46
SSBP3-208ENST00000444533 SH3TC1Q8TE82 1336 aa17.9■□□□□ 0.46
SSBP3-208ENST00000444533 SLC4A10Q6U841 1118 aa17.89■□□□□ 0.45
SSBP3-208ENST00000444533 ISCA1Q9BUE6 129 aa17.89■□□□□ 0.45
SSBP3-208ENST00000444533 ADCY9O60503 1353 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 1471.1 ms